RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Atf7ipQ7TT18 1306 aa15.73■□□□□ 0.11
Trim23-201ENSMUST00000022225 KarsQ99MN1 595 aaKnown RBP15.72■□□□□ 0.11
Trim23-201ENSMUST00000022225 Ripk4Q9ERK0 786 aa15.72■□□□□ 0.11
Trim23-201ENSMUST00000022225 Ccdc30Q8BVF4 654 aa15.71■□□□□ 0.11
Trim23-201ENSMUST00000022225 Dot1lQ6XZL8 1540 aa15.71■□□□□ 0.11
Trim23-201ENSMUST00000022225 Ncoa3O09000 1398 aa15.71■□□□□ 0.11
Trim23-201ENSMUST00000022225 Znf316Q6PGE4 1016 aa15.71■□□□□ 0.11
Trim23-201ENSMUST00000022225 Rbm10Q99KG3 930 aaKnown RBP15.71■□□□□ 0.11
Trim23-201ENSMUST00000022225 Trim44Q9QXA7 346 aa15.71■□□□□ 0.11
Trim23-201ENSMUST00000022225 Ppp2r1aQ76MZ3 589 aa15.71■□□□□ 0.1
Trim23-201ENSMUST00000022225 Adcy10Q8C0T9 1614 aa15.7■□□□□ 0.1
Trim23-201ENSMUST00000022225 Dhx16G3X8X0 1044 aaKnown RBP15.7■□□□□ 0.1
Trim23-201ENSMUST00000022225 Plb1Q3TTY0 1478 aa15.7■□□□□ 0.1
Trim23-201ENSMUST00000022225 Speer4f1Q9D5Q6 258 aa15.7■□□□□ 0.1
Trim23-201ENSMUST00000022225 Arhgap31A6X8Z5 1425 aa15.69■□□□□ 0.1
Trim23-201ENSMUST00000022225 Npm1Q61937 292 aaKnown RBP15.69■□□□□ 0.1
Trim23-201ENSMUST00000022225 Terf2O35144 541 aa15.68■□□□□ 0.1
Trim23-201ENSMUST00000022225 Ddit3P35639 168 aa15.68■□□□□ 0.1
Trim23-201ENSMUST00000022225 Eif4g3Q80XI3 1579 aaKnown RBP15.68■□□□□ 0.1
Trim23-201ENSMUST00000022225 Duxf3A0A0N4SV92 674 aa15.68■□□□□ 0.1
Trim23-201ENSMUST00000022225 Erbb4Q61527 1308 aa15.68■□□□□ 0.1
Trim23-201ENSMUST00000022225 Usp19Q3UJD6 1360 aa15.68■□□□□ 0.1
Trim23-201ENSMUST00000022225 Pdia4P08003 638 aaKnown RBP15.67■□□□□ 0.1
Trim23-201ENSMUST00000022225 Pank1Q8K4K6 548 aa15.67■□□□□ 0.1
Trim23-201ENSMUST00000022225 Ercc6F8VPZ5 1481 aa15.67■□□□□ 0.1
Trim23-201ENSMUST00000022225 SlkO54988 1233 aa15.67■□□□□ 0.1
Trim23-201ENSMUST00000022225 Ylpm1Q9R0I7 1386 aaKnown RBP15.66■□□□□ 0.1
Trim23-201ENSMUST00000022225 Pla2r1Q62028 1487 aa15.66■□□□□ 0.1
Trim23-201ENSMUST00000022225 Rab3gap2Q8BMG7 1366 aa15.66■□□□□ 0.1
Trim23-201ENSMUST00000022225 Nup155Q99P88 1391 aaKnown RBP15.66■□□□□ 0.1
Trim23-201ENSMUST00000022225 Kif2cQ922S8 721 aa15.65■□□□□ 0.1
Trim23-201ENSMUST00000022225 Plcb2A3KGF7 1181 aa15.64■□□□□ 0.09
Trim23-201ENSMUST00000022225 Tmf1B9EKI3 1091 aa15.64■□□□□ 0.09
Trim23-201ENSMUST00000022225 IbspQ61711 324 aa15.64■□□□□ 0.09
Trim23-201ENSMUST00000022225 Neurod2Q62414 383 aa15.64■□□□□ 0.09
Trim23-201ENSMUST00000022225 Stard8Q8K031 1019 aa15.64■□□□□ 0.09
Trim23-201ENSMUST00000022225 Gse1Q3U3C9 1213 aa15.63■□□□□ 0.09
Trim23-201ENSMUST00000022225 Arhgef11Q68FM7 1552 aa15.63■□□□□ 0.09
Trim23-201ENSMUST00000022225 Lekr1B2RVN1 116 aa15.62■□□□□ 0.09
Trim23-201ENSMUST00000022225 Sbno1Q689Z5 1390 aa15.62■□□□□ 0.09
Trim23-201ENSMUST00000022225 Dhx30Q99PU8 1217 aaKnown RBP15.62■□□□□ 0.09
Trim23-201ENSMUST00000022225 Ccdc141E9Q8Q6 1531 aa15.62■□□□□ 0.09
Trim23-201ENSMUST00000022225 Trim58Q5NCC9 485 aa15.62■□□□□ 0.09
Trim23-201ENSMUST00000022225 Gm16486A0A1D5RMD1 1434 aa15.61■□□□□ 0.09
Trim23-201ENSMUST00000022225 VgfQ0VGU4 617 aa15.61■□□□□ 0.09
Trim23-201ENSMUST00000022225 Cdc42bpaQ3UU96 1719 aa15.6■□□□□ 0.09
Trim23-201ENSMUST00000022225 Pnmal2G3X9N3 661 aa15.6■□□□□ 0.09
Trim23-201ENSMUST00000022225 Mknk2Q8CDB0 459 aa15.6■□□□□ 0.09
Trim23-201ENSMUST00000022225 Gas2l2Q5SSG4 860 aa15.59■□□□□ 0.09
Trim23-201ENSMUST00000022225 Phlpp2Q8BXA7 1320 aa15.59■□□□□ 0.09
Trim23-201ENSMUST00000022225 Pdcl2Q78Y63 240 aa15.59■□□□□ 0.09
Trim23-201ENSMUST00000022225 Mfap1aC0HKD8 439 aaKnown RBP15.58■□□□□ 0.08
Trim23-201ENSMUST00000022225 Mfap1bC0HKD9 439 aaKnown RBP15.58■□□□□ 0.08
Trim23-201ENSMUST00000022225 Rapgef6Q5NCJ1 1609 aa15.57■□□□□ 0.08
Trim23-201ENSMUST00000022225 Map4P27546 1125 aaKnown RBP15.57■□□□□ 0.08
Trim23-201ENSMUST00000022225 PtprgQ05909 1442 aa15.57■□□□□ 0.08
Trim23-201ENSMUST00000022225 Nsfl1cQ9CZ44 370 aaKnown RBP15.56■□□□□ 0.08
Trim23-201ENSMUST00000022225 Atl3Q91YH5 541 aa15.56■□□□□ 0.08
Trim23-201ENSMUST00000022225 Kiaa1551Q5DTW7 1521 aa15.56■□□□□ 0.08
Trim23-201ENSMUST00000022225 Fam135aQ6NS59 1506 aa15.56■□□□□ 0.08
Trim23-201ENSMUST00000022225 Trappc8E9PWG2 1437 aa15.56■□□□□ 0.08
Trim23-201ENSMUST00000022225 Fam135bQ9DAI6 1403 aa15.56■□□□□ 0.08
Trim23-201ENSMUST00000022225 WizO88286 1684 aaKnown RBP15.56■□□□□ 0.08
Trim23-201ENSMUST00000022225 Adamts12Q811B3 1600 aa15.56■□□□□ 0.08
Trim23-201ENSMUST00000022225 Ralbp1Q62172 648 aa15.55■□□□□ 0.08
Trim23-201ENSMUST00000022225 Myom2Q14BI5 1463 aa15.55■□□□□ 0.08
Trim23-201ENSMUST00000022225 Slc4a1apE9PX68 744 aa15.53■□□□□ 0.08
Trim23-201ENSMUST00000022225 Vgll3P85442 326 aa15.53■□□□□ 0.08
Trim23-201ENSMUST00000022225 Magi3Q9EQJ9 1476 aa15.53■□□□□ 0.08
Trim23-201ENSMUST00000022225 Rsph3aQ3UFY4 516 aa15.53■□□□□ 0.08
Trim23-201ENSMUST00000022225 Fam43aQ8BUP8 424 aa15.53■□□□□ 0.08
Trim23-201ENSMUST00000022225 Uspl1Q3ULM6 1089 aa15.52■□□□□ 0.08
Trim23-201ENSMUST00000022225 Ush1cQ9ES64 910 aa15.52■□□□□ 0.08
Trim23-201ENSMUST00000022225 Gys2Q8VCB3 704 aa15.52■□□□□ 0.07
Trim23-201ENSMUST00000022225 Col17a1Q07563 1470 aa15.52■□□□□ 0.07
Trim23-201ENSMUST00000022225 Tnnt2P50752 301 aa15.51■□□□□ 0.07
Trim23-201ENSMUST00000022225 Cc2d2bA0A286YDU8 1405 aa15.51■□□□□ 0.07
Trim23-201ENSMUST00000022225 Fam184bQ0KK56 942 aa15.51■□□□□ 0.07
Trim23-201ENSMUST00000022225 Golga2Q921M4 999 aa15.5■□□□□ 0.07
Trim23-201ENSMUST00000022225 CatipB9EKE5 520 aa15.5■□□□□ 0.07
Trim23-201ENSMUST00000022225 Adamts13Q769J6 1426 aa15.49■□□□□ 0.07
Trim23-201ENSMUST00000022225 Rbm25B2RY56 838 aaKnown RBP15.49■□□□□ 0.07
Trim23-201ENSMUST00000022225 WrnO09053 1401 aa15.49■□□□□ 0.07
Trim23-201ENSMUST00000022225 DekQ7TNV0 380 aaKnown RBP15.49■□□□□ 0.07
Trim23-201ENSMUST00000022225 Tmx3Q8BXZ1 456 aa15.49■□□□□ 0.07
Trim23-201ENSMUST00000022225 Fez1Q8K0X8 392 aa15.49■□□□□ 0.07
Trim23-201ENSMUST00000022225 Rrp7aQ9D1C9 280 aaKnown RBP15.49■□□□□ 0.07
Trim23-201ENSMUST00000022225 Rfx1P48377 963 aa15.48■□□□□ 0.07
Trim23-201ENSMUST00000022225 Trim26Q99PN3 545 aa15.48■□□□□ 0.07
Trim23-201ENSMUST00000022225 Erich6bQ9D4S6 220 aa15.48■□□□□ 0.07
Trim23-201ENSMUST00000022225 Ifit1bl1D3Z6F0 470 aa15.48■□□□□ 0.07
Trim23-201ENSMUST00000022225 ScaperF8VQ70 1398 aaKnown RBP15.47■□□□□ 0.07
Trim23-201ENSMUST00000022225 Ncapd2Q8K2Z4 1392 aa15.47■□□□□ 0.07
Trim23-201ENSMUST00000022225 Lrrc9Q8CDN9 1456 aa15.47■□□□□ 0.07
Trim23-201ENSMUST00000022225 Kiaa1107Q80TK0 1369 aa15.47■□□□□ 0.07
Trim23-201ENSMUST00000022225 Gm10093D3YYI8 482 aa15.47■□□□□ 0.07
Trim23-201ENSMUST00000022225 Hdac1O09106 482 aaKnown RBP15.47■□□□□ 0.07
Trim23-201ENSMUST00000022225 Dnajc14Q921R4 703 aa15.47■□□□□ 0.07
Trim23-201ENSMUST00000022225 Phldb1Q6PDH0 1371 aaKnown RBP15.47■□□□□ 0.07
Trim23-201ENSMUST00000022225 PxdnQ3UQ28 1475 aa15.47■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 184.8 ms