RNA–Protein interactions for RNA: tC(GCA)B

tC(GCA)B, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)B, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)BtC(GCA)B PRM5P40476 318 aa2.14□□□□□ -2.07
tC(GCA)BtC(GCA)B SDP1P40479 209 aa2.14□□□□□ -2.07
tC(GCA)BtC(GCA)B NUP42P49686 430 aaKnown RBP2.14□□□□□ -2.07
tC(GCA)BtC(GCA)B PRM8P53174 237 aa2.14□□□□□ -2.07
tC(GCA)BtC(GCA)B YGR025WP53216 100 aa2.14□□□□□ -2.07
tC(GCA)BtC(GCA)B POP6P53218 158 aa2.14□□□□□ -2.07
tC(GCA)BtC(GCA)B ALG9P53868 555 aaKnown RBP2.14□□□□□ -2.07
tC(GCA)BtC(GCA)B SWT21P53873 357 aaPredicted RBP2.14□□□□□ -2.07
tC(GCA)BtC(GCA)B SPR6Q01684 191 aa2.14□□□□□ -2.07
tC(GCA)BtC(GCA)B RPL11AP0C0W9 174 aaKnown RBP2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B DDR48P18899 430 aaKnown RBP2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B PRE9P23638 258 aaKnown RBP2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B PTP2P29461 750 aa2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B TFC1P32367 649 aa2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B YBL010CP32788 280 aa2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B UTP30P36144 274 aaKnown RBP2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B WSS1P38838 269 aa2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B MIT1P40002 666 aa2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B HXT14P42833 540 aa2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B IRC18P47056 224 aa2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B RRP17Q04031 235 aaPredicted RBP2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B NMA1Q06178 401 aaKnown RBP2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B YGR161W-CQ3E744 92 aa2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B RPL11BQ3E757 174 aaPredicted RBP2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B YPT6Q99260 215 aa2.13□□□□□ -2.07
tC(GCA)BtC(GCA)B LSB5P25369 354 aa2.12□□□□□ -2.07
tC(GCA)BtC(GCA)B YCR051WP25631 222 aa2.12□□□□□ -2.07
tC(GCA)BtC(GCA)B OAC1P32332 324 aa2.12□□□□□ -2.07
tC(GCA)BtC(GCA)B ERG3P32353 365 aa2.12□□□□□ -2.07
tC(GCA)BtC(GCA)B IKI1P38874 309 aa2.12□□□□□ -2.07
tC(GCA)BtC(GCA)B YAR068WP39564 161 aa2.12□□□□□ -2.07
tC(GCA)BtC(GCA)B LST8P41318 303 aa2.12□□□□□ -2.07
tC(GCA)BtC(GCA)B OCA2P53949 197 aa2.12□□□□□ -2.07
tC(GCA)BtC(GCA)B YMR315WQ04869 349 aaKnown RBP2.12□□□□□ -2.07
tC(GCA)BtC(GCA)B PRM7Q12459 698 aa2.12□□□□□ -2.07
tC(GCA)BtC(GCA)B YPL229WQ99395 206 aa2.12□□□□□ -2.07
tC(GCA)BtC(GCA)B CYC3P06182 269 aa2.11□□□□□ -2.07
tC(GCA)BtC(GCA)B MRP2P10663 115 aaPredicted RBP2.11□□□□□ -2.07
tC(GCA)BtC(GCA)B YCR101CP25607 182 aa2.11□□□□□ -2.07
tC(GCA)BtC(GCA)B VAM7P32912 316 aa2.11□□□□□ -2.07
tC(GCA)BtC(GCA)B UMP1P38293 148 aa2.11□□□□□ -2.07
tC(GCA)BtC(GCA)B SDS24P38314 527 aa2.11□□□□□ -2.07
tC(GCA)BtC(GCA)B ECM1P39715 212 aa2.11□□□□□ -2.07
tC(GCA)BtC(GCA)B IRC22P40006 225 aa2.11□□□□□ -2.07
tC(GCA)BtC(GCA)B PCL7P40186 285 aa2.11□□□□□ -2.07
tC(GCA)BtC(GCA)B GWT1P47026 490 aa2.11□□□□□ -2.07
tC(GCA)BtC(GCA)B GPI1P53306 609 aa2.11□□□□□ -2.07
tC(GCA)BtC(GCA)B TOM7P53507 60 aa2.11□□□□□ -2.07
tC(GCA)BtC(GCA)B YPS3Q12303 508 aa2.11□□□□□ -2.07
tC(GCA)BtC(GCA)B DGK1Q12382 290 aa2.11□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-DR4O74302 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B SOD1P00445 154 aaKnown RBP2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-AP0CX57 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-PR1P0CX58 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-ORP0CX59 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-PR2P0CX60 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-DR5P0CX65 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-ER2P0CX66 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-GR3P0CX67 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-LR1P0CX68 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-MR2P0CX69 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B NOP1P15646 327 aaKnown RBP2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B ATP7P30902 174 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B ARO7P32178 256 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B AGA2P32781 87 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B IRC24P40580 263 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B IAH1P41734 238 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-JR2P47099 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B FMP48P53233 369 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-DR1Q03856 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B YMR130WQ04223 302 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-ML1Q04706 440 aaKnown RBP2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B MEU1Q07938 337 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
tC(GCA)BtC(GCA)B TY1A-BRQ12217 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B CRC1Q12289 327 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B PST2Q12335 198 aaKnown RBP2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-NL2Q12470 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B TY1A-GR2Q12485 440 aa2.1□□□□□ -2.07
tC(GCA)BtC(GCA)B YDR034C-AP0C289 58 aa2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B RPL2AP0CX45 254 aaKnown RBP2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B RPL2BP0CX46 254 aaKnown RBP2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B ECT1P33412 323 aa2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B SRY1P36007 326 aa2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B RCN1P36054 211 aa2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B MRPL27P36526 146 aaPredicted RBP2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B AHP1P38013 176 aaKnown RBP2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B PTC7P38797 343 aa2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B YER135CP40082 130 aa2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B MDJ2P42834 146 aa2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B PAM16P42949 149 aa2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B GNA1P43577 159 aaPredicted RBP2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B DSL1P53847 754 aa2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B SNZ1Q03148 297 aa2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B MRPS8Q03799 155 aa2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B TSA2Q04120 196 aa2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B SMP3Q04174 516 aa2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B DPB4Q04603 196 aaKnown RBP2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B PCL9Q12477 304 aa2.09□□□□□ -2.07
tC(GCA)BtC(GCA)B MRP10O75012 95 aa2.08□□□□□ -2.08
tC(GCA)BtC(GCA)B CYC7P00045 113 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 60 ms