RNA–Protein interactions for RNA: YPR111W

DBF20, Transcript of Ser/Thr kinase involved in late nuclear division, yeast

Gene DBF20, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF20	YPR111W	YLR036C	Q07986	203 aa		2.09	□□□□□ -2.08
DBF20	YPR111W	YLR050C	Q12155	161 aa	Known RBP	2.09	□□□□□ -2.08
DBF20	YPR111W	RIO1	Q12196	484 aa	Known RBP	2.09	□□□□□ -2.08
DBF20	YPR111W	PSF1	Q12488	208 aa		2.09	□□□□□ -2.08
DBF20	YPR111W	CCH1	P50077	2039 aa		2.08	□□□□□ -2.08
DBF20	YPR111W	REP2	P03872	296 aa		2.08	□□□□□ -2.08
DBF20	YPR111W	RPL9A	P05738	191 aa	Known RBP	2.08	□□□□□ -2.08
DBF20	YPR111W	PUT1	P09368	476 aa		2.08	□□□□□ -2.08
DBF20	YPR111W	SEC17	P32602	292 aa		2.08	□□□□□ -2.08
DBF20	YPR111W	MSA2	P36157	363 aa		2.08	□□□□□ -2.08
DBF20	YPR111W	YGP1	P38616	354 aa	Known RBP	2.08	□□□□□ -2.08
DBF20	YPR111W	RMD6	P39975	231 aa		2.08	□□□□□ -2.08
DBF20	YPR111W	YER188W	P40103	239 aa		2.08	□□□□□ -2.08
DBF20	YPR111W	PFS2	P42841	465 aa	Known RBP	2.08	□□□□□ -2.08
DBF20	YPR111W	SKI6	P46948	246 aa	Predicted RBP	2.08	□□□□□ -2.08
DBF20	YPR111W	RPL9B	P51401	191 aa	Known RBP	2.08	□□□□□ -2.08
DBF20	YPR111W	UBC12	P52491	188 aa		2.08	□□□□□ -2.08
DBF20	YPR111W	YIP3	P53633	176 aa		2.08	□□□□□ -2.08
DBF20	YPR111W	YNL184C	P53876	108 aa		2.08	□□□□□ -2.08
DBF20	YPR111W	HPT1	Q04178	221 aa	Known RBP	2.08	□□□□□ -2.08
DBF20	YPR111W	YMR315W	Q04869	349 aa	Known RBP	2.08	□□□□□ -2.08
DBF20	YPR111W	NOC4	Q06512	552 aa	Predicted RBP	2.08	□□□□□ -2.08
DBF20	YPR111W	CDD1	Q06549	142 aa		2.08	□□□□□ -2.08
DBF20	YPR111W	IKI3	Q06706	1349 aa	Known RBP	2.07	□□□□□ -2.08
DBF20	YPR111W	DPM1	P14020	267 aa	Known RBP	2.07	□□□□□ -2.08
DBF20	YPR111W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.07	□□□□□ -2.08	not detected
DBF20	YPR111W	ATG22	P25568	528 aa		2.07	□□□□□ -2.08
DBF20	YPR111W	UBC6	P33296	250 aa	Predicted RBP	2.07	□□□□□ -2.08
DBF20	YPR111W	CLG1	P35190	452 aa		2.07	□□□□□ -2.08
DBF20	YPR111W	YHR125W	P38831	101 aa		2.07	□□□□□ -2.08
DBF20	YPR111W	NUP49	Q02199	472 aa		2.07	□□□□□ -2.08
DBF20	YPR111W	SNO1	Q03144	224 aa		2.07	□□□□□ -2.08
DBF20	YPR111W	YDR249C	Q03787	373 aa		2.07	□□□□□ -2.08
DBF20	YPR111W	YLR031W	Q07978	186 aa		2.07	□□□□□ -2.08
DBF20	YPR111W	YOL024W	Q08172	172 aa		2.07	□□□□□ -2.08
DBF20	YPR111W	BBP1	Q12365	385 aa		2.07	□□□□□ -2.08
DBF20	YPR111W	SAS5	Q99314	248 aa		2.07	□□□□□ -2.08
DBF20	YPR111W	RAD10	P06838	210 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	URA5	P13298	226 aa	Known RBP	2.06	□□□□□ -2.08
DBF20	YPR111W	ARO7	P32178	256 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	SCM4	P32564	187 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	SKG1	P36169	355 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	FMP23	P38231	175 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	YIL059C	P40520	121 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	PRM15	Q03262	622 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	YLR179C	Q06252	201 aa	Known RBP	2.06	□□□□□ -2.08
DBF20	YPR111W	FEX1	Q08913	375 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	FEX2	Q08991	375 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	AKR2	Q12013	749 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	PRM7	Q12459	698 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	RPL26A	P05743	127 aa	Known RBP	2.06	□□□□□ -2.08
DBF20	YPR111W	QCR2	P07257	368 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	TAH1	P25638	111 aa	Predicted RBP	2.06	□□□□□ -2.08
DBF20	YPR111W	AGA2	P32781	87 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	YHL026C	P38740	315 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	SRP14	P38985	146 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	SPO73	P40031	143 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	LSM4	P40070	187 aa	Known RBP	2.06	□□□□□ -2.08
DBF20	YPR111W	MRPL49	P40858	161 aa	Predicted RBP	2.06	□□□□□ -2.08
DBF20	YPR111W	RPL26B	P53221	127 aa	Known RBP	2.06	□□□□□ -2.08
DBF20	YPR111W	PLP1	Q04004	230 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	ATG39	Q06159	398 aa		2.06	□□□□□ -2.08
DBF20	YPR111W	SIR2	P06700	562 aa		2.05	□□□□□ -2.08
DBF20	YPR111W	RPB3	P16370	318 aa	Known RBP	2.05	□□□□□ -2.08
DBF20	YPR111W	PET9	P18239	318 aa	Known RBP	2.05	□□□□□ -2.08
DBF20	YPR111W	PTM1	P32857	523 aa		2.05	□□□□□ -2.08
DBF20	YPR111W	AST2	P39945	430 aa	Known RBP	2.05	□□□□□ -2.08
DBF20	YPR111W	GLE2	P40066	365 aa		2.05	□□□□□ -2.08
DBF20	YPR111W	AIM25	P47140	327 aa		2.05	□□□□□ -2.08
DBF20	YPR111W	SWP1	Q02795	286 aa		2.05	□□□□□ -2.08
DBF20	YPR111W	GRX8	Q05926	109 aa		2.05	□□□□□ -2.08
DBF20	YPR111W	NSL1	Q12143	216 aa		2.05	□□□□□ -2.08
DBF20	YPR111W	TSC3	Q3E790	80 aa		2.05	□□□□□ -2.08
DBF20	YPR111W	TDA8	Q6B2U8	126 aa		2.05	□□□□□ -2.08
DBF20	YPR111W	MBF1	O14467	151 aa	Known RBP	2.04	□□□□□ -2.08
DBF20	YPR111W	CDC8	P00572	216 aa		2.04	□□□□□ -2.08
DBF20	YPR111W	BET1	P22804	142 aa		2.04	□□□□□ -2.08
DBF20	YPR111W	SCO1	P23833	295 aa		2.04	□□□□□ -2.08
DBF20	YPR111W	CTR2	P38865	189 aa		2.04	□□□□□ -2.08
DBF20	YPR111W	NVJ1	P38881	321 aa		2.04	□□□□□ -2.08
DBF20	YPR111W	GON7	P46984	123 aa		2.04	□□□□□ -2.08
DBF20	YPR111W	CAB4	P53332	305 aa		2.04	□□□□□ -2.08
DBF20	YPR111W	YLR053C	Q12026	108 aa		2.04	□□□□□ -2.08
DBF20	YPR111W	YPL162C	Q12042	273 aa		2.04	□□□□□ -2.08
DBF20	YPR111W	MCP1	Q12106	302 aa		2.04	□□□□□ -2.08
DBF20	YPR111W	IGO2	Q9P305	131 aa		2.04	□□□□□ -2.08
DBF20	YPR111W	FKS1	P38631	1876 aa	Known RBP	2.03	□□□□□ -2.08
DBF20	YPR111W	YPR170W-B	P0C5R9	85 aa		2.03	□□□□□ -2.08
DBF20	YPR111W	YLR156W	P0CE96	114 aa		2.03	□□□□□ -2.08
DBF20	YPR111W	YLR159W	P0CE97	114 aa		2.03	□□□□□ -2.08
DBF20	YPR111W	YLR161W	P0CE98	114 aa		2.03	□□□□□ -2.08
DBF20	YPR111W	RPS23A	P0CX29	145 aa	Known RBP	2.03	□□□□□ -2.08
DBF20	YPR111W	RPS23B	P0CX30	145 aa		2.03	□□□□□ -2.08
DBF20	YPR111W	AHC2	P25649	128 aa		2.03	□□□□□ -2.08
DBF20	YPR111W	MEI4	P29467	408 aa		2.03	□□□□□ -2.08
DBF20	YPR111W	YKR032W	P36127	104 aa		2.03	□□□□□ -2.08
DBF20	YPR111W	YKR041W	P36134	250 aa		2.03	□□□□□ -2.08
DBF20	YPR111W	UTP30	P36144	274 aa	Known RBP	2.03	□□□□□ -2.08
DBF20	YPR111W	AME1	P38313	324 aa		2.03	□□□□□ -2.08
DBF20	YPR111W	YER121W	P40076	114 aa		2.03	□□□□□ -2.08

Retrieved 100 of 5,963 RNA–protein pairs in 83.9 ms