RNA–Protein interactions for RNA: YOR179C

SYC1, Transcript of Subunit of the APT subcomplex of cleavage and polyadenylation factor, yeastyeast

Gene SYC1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SYC1YOR179C YGL235WP53071 178 aa2.48□□□□□ -2.01
SYC1YOR179C YMR315WQ04869 349 aaKnown RBP2.48□□□□□ -2.01
SYC1YOR179C RDS3Q06835 107 aaPredicted RBP2.48□□□□□ -2.01
SYC1YOR179C YOL024WQ08172 172 aa2.48□□□□□ -2.01
SYC1YOR179C IGO2Q9P305 131 aa2.48□□□□□ -2.01
SYC1YOR179C SGA1P08019 549 aa2.47□□□□□ -2.01
SYC1YOR179C DPM1P14020 267 aaKnown RBP2.47□□□□□ -2.01
SYC1YOR179C TRX3P25372 127 aa2.47□□□□□ -2.01
SYC1YOR179C MGT1P26188 188 aa2.47□□□□□ -2.01
SYC1YOR179C CLG1P35190 452 aa2.47□□□□□ -2.01
SYC1YOR179C YPT52P36018 234 aaKnown RBP2.47□□□□□ -2.01
SYC1YOR179C MED6P38782 295 aa2.47□□□□□ -2.01
SYC1YOR179C YER076CP40049 302 aa2.47□□□□□ -2.01
SYC1YOR179C PDS1P40316 373 aaPredicted RBP2.47□□□□□ -2.01
SYC1YOR179C CAT5P41735 233 aa2.47□□□□□ -2.01
SYC1YOR179C LSM1P47017 172 aaKnown RBP2.47□□□□□ -2.01
SYC1YOR179C AIM25P47140 327 aa2.47□□□□□ -2.01
SYC1YOR179C ERV29P53337 310 aa2.47□□□□□ -2.01
SYC1YOR179C NUP49Q02199 472 aa2.47□□□□□ -2.01
SYC1YOR179C RSM10Q03201 203 aa2.47□□□□□ -2.01
SYC1YOR179C YLR030WQ07967 263 aa2.47□□□□□ -2.01
SYC1YOR179C YLR036CQ07986 203 aa2.47□□□□□ -2.01
SYC1YOR179C YOR283WQ12040 230 aaKnown RBP2.47□□□□□ -2.01
SYC1YOR179C MDM32Q12171 622 aa2.47□□□□□ -2.01
SYC1YOR179C PET20Q99373 253 aa2.47□□□□□ -2.01
SYC1YOR179C YLR462WO13556 202 aa2.46□□□□□ -2.02
SYC1YOR179C IPP1P00817 287 aaKnown RBP2.46□□□□□ -2.02
SYC1YOR179C RPS28BP0C0X0 67 aaKnown RBP2.46□□□□□ -2.02
SYC1YOR179C ERG24P32462 438 aaKnown RBP2.46□□□□□ -2.02
SYC1YOR179C UTR5P32630 166 aa2.46□□□□□ -2.02
SYC1YOR179C SRP102P36057 244 aaPredicted RBP2.46□□□□□ -2.02
SYC1YOR179C YEL075CP39972 122 aa2.46□□□□□ -2.02
SYC1YOR179C EDC3P39998 551 aaKnown RBP2.46□□□□□ -2.02
SYC1YOR179C OST2P46964 130 aa2.46□□□□□ -2.02
SYC1YOR179C ILM1P47155 203 aa2.46□□□□□ -2.02
SYC1YOR179C SBH2P52871 88 aa2.46□□□□□ -2.02
SYC1YOR179C LSM7P53905 115 aaKnown RBP2.46□□□□□ -2.02
SYC1YOR179C ABF2Q02486 183 aa2.46□□□□□ -2.02
SYC1YOR179C YDC1Q02896 317 aa2.46□□□□□ -2.02
SYC1YOR179C GGA1Q06336 557 aa2.46□□□□□ -2.02
SYC1YOR179C YOL160WQ08321 113 aa2.46□□□□□ -2.02
SYC1YOR179C NSL1Q12143 216 aa2.46□□□□□ -2.02
SYC1YOR179C YLR050CQ12155 161 aaKnown RBP2.46□□□□□ -2.02
SYC1YOR179C RPS28AQ3E7X9 67 aaPredicted RBP2.46□□□□□ -2.02
SYC1YOR179C SAS5Q99314 248 aa2.46□□□□□ -2.02
SYC1YOR179C TCA17P32613 152 aa2.45□□□□□ -2.02
SYC1YOR179C COS8P38723 381 aa2.45□□□□□ -2.02
SYC1YOR179C YFH7P43591 353 aa2.45□□□□□ -2.02
SYC1YOR179C UBC12P52491 188 aa2.45□□□□□ -2.02
SYC1YOR179C PRM8P53174 237 aa2.45□□□□□ -2.02
SYC1YOR179C CAB4P53332 305 aa2.45□□□□□ -2.02
SYC1YOR179C YNL184CP53876 108 aa2.45□□□□□ -2.02
SYC1YOR179C SPC2Q04969 178 aa2.45□□□□□ -2.02
SYC1YOR179C YLR053CQ12026 108 aa2.45□□□□□ -2.02
SYC1YOR179C LSO2Q3E772 92 aaKnown RBP2.45□□□□□ -2.02
SYC1YOR179C YHR214C-EQ8TGK0 99 aa2.45□□□□□ -2.02
SYC1YOR179C RPL26AP05743 127 aaKnown RBP2.44□□□□□ -2.02
SYC1YOR179C ARO7P32178 256 aa2.44□□□□□ -2.02
SYC1YOR179C TIF34P40217 347 aaKnown RBP2.44□□□□□ -2.02
SYC1YOR179C SOK1P40317 901 aa2.44□□□□□ -2.02
SYC1YOR179C ICE2P40499 491 aa2.44□□□□□ -2.02
SYC1YOR179C YJR146WP47174 117 aa2.44□□□□□ -2.02
SYC1YOR179C DSK2P48510 373 aa2.44□□□□□ -2.02
SYC1YOR179C RPL26BP53221 127 aaKnown RBP2.44□□□□□ -2.02
SYC1YOR179C NQM1P53228 333 aaPredicted RBP2.44□□□□□ -2.02
SYC1YOR179C DID2P69771 204 aa2.44□□□□□ -2.02
SYC1YOR179C SUE1Q06524 206 aa2.44□□□□□ -2.02
SYC1YOR179C RDI1Q12434 202 aa2.44□□□□□ -2.02
SYC1YOR179C YDL085C-AQ3E7B7 68 aaKnown RBP2.44□□□□□ -2.02
SYC1YOR179C MMS22Q06164 1454 aa2.44□□□□□ -2.02
SYC1YOR179C RPL25P04456 142 aaKnown RBP2.43□□□□□ -2.02
SYC1YOR179C CDC7P06243 507 aa2.43□□□□□ -2.02
SYC1YOR179C DSF1P0CX08 502 aa2.43□□□□□ -2.02
SYC1YOR179C YNR073CP0CX09 502 aa2.43□□□□□ -2.02
SYC1YOR179C YCR090CP25654 182 aaKnown RBP2.43□□□□□ -2.02
SYC1YOR179C PTM1P32857 523 aa2.43□□□□□ -2.02
SYC1YOR179C POP7P38291 140 aa2.43□□□□□ -2.02
SYC1YOR179C DOG1P38774 246 aa2.43□□□□□ -2.02
SYC1YOR179C NVJ1P38881 321 aa2.43□□□□□ -2.02
SYC1YOR179C LSM4P40070 187 aaKnown RBP2.43□□□□□ -2.02
SYC1YOR179C ARC15P40518 154 aaRIP-Chip data2.43□□□□□ -2.02not detected
SYC1YOR179C YGR050CP53231 118 aa2.43□□□□□ -2.02
SYC1YOR179C YML108WQ03759 105 aa2.43□□□□□ -2.02
SYC1YOR179C YPL257WQ08974 193 aa2.43□□□□□ -2.02
SYC1YOR179C HTL1Q9URQ5 78 aa2.43□□□□□ -2.02
SYC1YOR179C SIR2P06700 562 aa2.42□□□□□ -2.02
SYC1YOR179C MDH3P32419 343 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
SYC1YOR179C DOG2P38773 246 aa2.42□□□□□ -2.02
SYC1YOR179C FMP32P43557 207 aa2.42□□□□□ -2.02
SYC1YOR179C COG5P53951 403 aa2.42□□□□□ -2.02
SYC1YOR179C SLM2P53955 656 aa2.42□□□□□ -2.02
SYC1YOR179C YPR127WQ06494 345 aa2.42□□□□□ -2.02
SYC1YOR179C NIP7Q08962 181 aaKnown RBP2.42□□□□□ -2.02
SYC1YOR179C PEX11Q12462 236 aa2.42□□□□□ -2.02
SYC1YOR179C XRN1P22147 1528 aaKnown RBP2.42□□□□□ -2.02
SYC1YOR179C TCB3Q03640 1545 aaKnown RBP2.42□□□□□ -2.02
SYC1YOR179C YHR032W-AP0C5N6 59 aa2.41□□□□□ -2.02
SYC1YOR179C RPS24AP0CX31 135 aaKnown RBP2.41□□□□□ -2.02
SYC1YOR179C RPS24BP0CX32 135 aaKnown RBP2.41□□□□□ -2.02
SYC1YOR179C SNF4P12904 322 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms