RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W YOR343CQ12484 108 aa3.32□□□□□ -1.88
ECM16YMR128W YPR014CQ6B0W2 109 aa3.32□□□□□ -1.88
ECM16YMR128W SPT15P13393 240 aaKnown RBP3.32□□□□□ -1.88
ECM16YMR128W MIG1P27705 504 aa3.32□□□□□ -1.88
ECM16YMR128W MNS1P32906 549 aa3.32□□□□□ -1.88
ECM16YMR128W UPS2P35200 230 aa3.32□□□□□ -1.88
ECM16YMR128W YER010CP40011 234 aa3.32□□□□□ -1.88
ECM16YMR128W SPC25P40014 221 aa3.32□□□□□ -1.88
ECM16YMR128W LRO1P40345 661 aa3.32□□□□□ -1.88
ECM16YMR128W THI74Q04083 370 aa3.32□□□□□ -1.88
ECM16YMR128W FSH2Q05015 223 aa3.32□□□□□ -1.88
ECM16YMR128W ATX2Q12067 313 aa3.32□□□□□ -1.88
ECM16YMR128W YNR034W-AQ3E841 98 aa3.32□□□□□ -1.88
ECM16YMR128W CYC7P00045 113 aa3.31□□□□□ -1.88
ECM16YMR128W SCEIP03882 235 aa3.31□□□□□ -1.88
ECM16YMR128W SEC59P20048 519 aa3.31□□□□□ -1.88
ECM16YMR128W VMA16P23968 213 aa3.31□□□□□ -1.88
ECM16YMR128W OAR1P35731 278 aa3.31□□□□□ -1.88
ECM16YMR128W OSW5P40219 148 aa3.31□□□□□ -1.88
ECM16YMR128W ERJ5P43613 295 aaPredicted RBP3.31□□□□□ -1.88
ECM16YMR128W YGR149WP48236 432 aa3.31□□□□□ -1.88
ECM16YMR128W TAO3P40468 2376 aa3.31□□□□□ -1.88
ECM16YMR128W BEM2P39960 2167 aaKnown RBP3.31□□□□□ -1.88
ECM16YMR128W QCR2P07257 368 aa3.31□□□□□ -1.88
ECM16YMR128W BGL2P15703 313 aaKnown RBP3.31□□□□□ -1.88
ECM16YMR128W OLE1P21147 510 aaKnown RBP3.31□□□□□ -1.88
ECM16YMR128W MIR1P23641 311 aaKnown RBP3.31□□□□□ -1.88
ECM16YMR128W MRPL4P36517 319 aa3.31□□□□□ -1.88
ECM16YMR128W RHO3Q00245 231 aaKnown RBP3.31□□□□□ -1.88
ECM16YMR128W MRPL1Q04599 285 aa3.31□□□□□ -1.88
ECM16YMR128W YPR174CQ06616 221 aaPredicted RBP3.31□□□□□ -1.88
ECM16YMR128W RLM1Q12224 676 aa3.31□□□□□ -1.88
ECM16YMR128W YCT1Q12235 531 aa3.31□□□□□ -1.88
ECM16YMR128W YDR262WQ12331 272 aa3.31□□□□□ -1.88
ECM16YMR128W YLR358CO13565 187 aa3.31□□□□□ -1.88
ECM16YMR128W STF1P01098 86 aa3.31□□□□□ -1.88
ECM16YMR128W RPL25P04456 142 aaKnown RBP3.31□□□□□ -1.88
ECM16YMR128W MRPL44P19956 98 aa3.31□□□□□ -1.88
ECM16YMR128W FPR1P20081 114 aaKnown RBP3.31□□□□□ -1.88
ECM16YMR128W STP22P25604 385 aa3.31□□□□□ -1.88
ECM16YMR128W FRM2P37261 193 aa3.31□□□□□ -1.88
ECM16YMR128W YIL152WP40455 235 aa3.31□□□□□ -1.88
ECM16YMR128W OST3P48439 350 aa3.31□□□□□ -1.88
ECM16YMR128W MRPS17Q03246 237 aaPredicted RBP3.31□□□□□ -1.88
ECM16YMR128W CUE4Q04201 117 aaPredicted RBP3.31□□□□□ -1.88
ECM16YMR128W YMR082CQ04276 118 aa3.31□□□□□ -1.88
ECM16YMR128W MRPL51Q06090 140 aaPredicted RBP3.31□□□□□ -1.88
ECM16YMR128W BSC6Q08280 497 aa3.31□□□□□ -1.88
ECM16YMR128W ERV2Q12284 196 aa3.31□□□□□ -1.88
ECM16YMR128W AGC1Q12482 902 aa3.31□□□□□ -1.88
ECM16YMR128W TDH3P00359 332 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
ECM16YMR128W FUN14P18411 198 aa3.3□□□□□ -1.88
ECM16YMR128W RPS27AP35997 82 aaKnown RBP3.3□□□□□ -1.88
ECM16YMR128W RPS27BP38711 82 aa3.3□□□□□ -1.88
ECM16YMR128W YHR180WP38868 163 aa3.3□□□□□ -1.88
ECM16YMR128W YAL037WP39728 267 aa3.3□□□□□ -1.88
ECM16YMR128W YEA4P40004 342 aa3.3□□□□□ -1.88
ECM16YMR128W HCH1P53834 153 aa3.3□□□□□ -1.88
ECM16YMR128W TDA7P53882 636 aaPredicted RBP3.3□□□□□ -1.88
ECM16YMR128W YDR102CQ03864 110 aa3.3□□□□□ -1.88
ECM16YMR128W YLR456WQ06199 204 aa3.3□□□□□ -1.88
ECM16YMR128W MCH4Q08268 501 aa3.3□□□□□ -1.88
ECM16YMR128W YLR118CQ12354 227 aa3.3□□□□□ -1.88
ECM16YMR128W ERG2P32352 222 aa3.3□□□□□ -1.88
ECM16YMR128W HSP150P32478 413 aa3.3□□□□□ -1.88
ECM16YMR128W YKL097CP34245 136 aa3.3□□□□□ -1.88
ECM16YMR128W MOB2P43563 287 aa3.3□□□□□ -1.88
ECM16YMR128W COX16P47081 118 aa3.3□□□□□ -1.88
ECM16YMR128W VAM3Q12241 283 aa3.3□□□□□ -1.88
ECM16YMR128W AIM45Q12480 344 aaKnown RBP3.3□□□□□ -1.88
ECM16YMR128W TRA1P38811 3744 aa3.3□□□□□ -1.88
ECM16YMR128W POL2P21951 2222 aaKnown RBP3.3□□□□□ -1.88
ECM16YMR128W RPS25BP0C0T4 108 aaKnown RBP3.3□□□□□ -1.88
ECM16YMR128W NUP1P20676 1076 aa3.3□□□□□ -1.88
ECM16YMR128W GPX1P36014 167 aa3.3□□□□□ -1.88
ECM16YMR128W SWD2P36104 329 aaPredicted RBP3.3□□□□□ -1.88
ECM16YMR128W YBR096WP38256 230 aa3.3□□□□□ -1.88
ECM16YMR128W YJR012CP47087 207 aa3.3□□□□□ -1.88
ECM16YMR128W TAF4P50105 388 aa3.3□□□□□ -1.88
ECM16YMR128W TIM10P87108 93 aa3.3□□□□□ -1.88
ECM16YMR128W HOF1Q05080 669 aa3.3□□□□□ -1.88
ECM16YMR128W YDL242WQ07746 117 aa3.3□□□□□ -1.88
ECM16YMR128W COQ10Q08058 207 aa3.3□□□□□ -1.88
ECM16YMR128W PAA1Q12447 191 aaKnown RBP3.3□□□□□ -1.88
ECM16YMR128W RPS25AQ3E792 108 aaPredicted RBP3.3□□□□□ -1.88
ECM16YMR128W RPS14AP06367 137 aaKnown RBP3.29□□□□□ -1.88
ECM16YMR128W CDC50P25656 391 aa3.29□□□□□ -1.88
ECM16YMR128W COQ3P27680 312 aa3.29□□□□□ -1.88
ECM16YMR128W REC114P32841 428 aa3.29□□□□□ -1.88
ECM16YMR128W RPS14BP39516 138 aaKnown RBP3.29□□□□□ -1.88
ECM16YMR128W PHS1P40857 217 aa3.29□□□□□ -1.88
ECM16YMR128W GWT1P47026 490 aa3.29□□□□□ -1.88
ECM16YMR128W YJR011CP47086 261 aaPredicted RBP3.29□□□□□ -1.88
ECM16YMR128W YGL262WP53054 175 aa3.29□□□□□ -1.88
ECM16YMR128W STP3Q05937 343 aa3.29□□□□□ -1.88
ECM16YMR128W MIM1Q08176 113 aa3.29□□□□□ -1.88
ECM16YMR128W USV1Q12132 391 aa3.29□□□□□ -1.88
ECM16YMR128W ATG5Q12380 294 aa3.29□□□□□ -1.88
ECM16YMR128W RAX2Q12465 1220 aa3.29□□□□□ -1.88
ECM16YMR128W FAS1P07149 2051 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 83.7 ms