RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C YHC3P47040 408 aa1.85□□□□□ -2.11
UFD4YKL010C TRM9P49957 279 aa1.85□□□□□ -2.11
UFD4YKL010C MSO1P53604 210 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C ELA1P53861 379 aaPredicted RBP1.85□□□□□ -2.11
UFD4YKL010C GIM3P53900 129 aa1.85□□□□□ -2.11
UFD4YKL010C RNH201P53942 307 aa1.85□□□□□ -2.11
UFD4YKL010C SRP1Q02821 542 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C YDC1Q02896 317 aa1.85□□□□□ -2.11
UFD4YKL010C SNO1Q03144 224 aa1.85□□□□□ -2.11
UFD4YKL010C RDL2Q08742 149 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C MPD1Q12404 318 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C YPT1P01123 206 aaKnown RBP1.84□□□□□ -2.11
UFD4YKL010C ERG4P25340 473 aa1.84□□□□□ -2.11
UFD4YKL010C DEG1P31115 442 aaKnown RBP1.84□□□□□ -2.11
UFD4YKL010C CPR5P35176 225 aa1.84□□□□□ -2.11
UFD4YKL010C YAR068WP39564 161 aa1.84□□□□□ -2.11
UFD4YKL010C GZF3P42944 551 aaKnown RBP1.84□□□□□ -2.11
UFD4YKL010C YJL118WP47022 219 aa1.84□□□□□ -2.11
UFD4YKL010C AIM24P47127 394 aa1.84□□□□□ -2.11
UFD4YKL010C ADO1P47143 340 aaKnown RBP1.84□□□□□ -2.11
UFD4YKL010C SNN1P48232 102 aa1.84□□□□□ -2.11
UFD4YKL010C ERV14P53173 138 aa1.84□□□□□ -2.11
UFD4YKL010C YGR126WP53274 230 aa1.84□□□□□ -2.11
UFD4YKL010C YPL039WQ03080 316 aa1.84□□□□□ -2.11
UFD4YKL010C PIN3Q06449 215 aa1.84□□□□□ -2.11
UFD4YKL010C ATG33Q06485 197 aa1.84□□□□□ -2.11
UFD4YKL010C SWM1Q12379 170 aa1.84□□□□□ -2.11
UFD4YKL010C MEC1P38111 2368 aa1.84□□□□□ -2.11
UFD4YKL010C SGA1P08019 549 aa1.84□□□□□ -2.11
UFD4YKL010C YFR010W-AP0C5N0 62 aa1.84□□□□□ -2.11
UFD4YKL010C SPO7P18410 259 aa1.84□□□□□ -2.11
UFD4YKL010C AFR1P33304 620 aa1.84□□□□□ -2.11
UFD4YKL010C ATG8P38182 117 aaRIP-Chip data1.84□□□□□ -2.11not detected
UFD4YKL010C SSO2P39926 295 aa1.84□□□□□ -2.11
UFD4YKL010C RPS26BP39939 119 aaKnown RBP1.84□□□□□ -2.11
UFD4YKL010C MNN10P50108 393 aaKnown RBP1.84□□□□□ -2.11
UFD4YKL010C RSM23Q01163 450 aa1.84□□□□□ -2.11
UFD4YKL010C UPS1Q05776 175 aa1.84□□□□□ -2.11
UFD4YKL010C YLR456WQ06199 204 aa1.84□□□□□ -2.11
UFD4YKL010C HRD1Q08109 551 aa1.84□□□□□ -2.11
UFD4YKL010C USB1Q12208 290 aaKnown RBP1.84□□□□□ -2.11
UFD4YKL010C PCC1Q3E833 88 aa1.84□□□□□ -2.11
UFD4YKL010C RPS22AP0C0W1 130 aaKnown RBP1.84□□□□□ -2.12
UFD4YKL010C CDC26P14724 124 aa1.84□□□□□ -2.12
UFD4YKL010C POP5P28005 173 aa1.84□□□□□ -2.12
UFD4YKL010C RNP1P32385 249 aa1.84□□□□□ -2.12
UFD4YKL010C YHL037CP38733 133 aa1.84□□□□□ -2.12
UFD4YKL010C YHR180WP38868 163 aa1.84□□□□□ -2.12
UFD4YKL010C YER079WP40052 210 aaKnown RBP1.84□□□□□ -2.12
UFD4YKL010C EMC5P40540 141 aa1.84□□□□□ -2.12
UFD4YKL010C GPI2P46961 280 aa1.84□□□□□ -2.12
UFD4YKL010C LSM8P47093 109 aaKnown RBP1.84□□□□□ -2.12
UFD4YKL010C UFD1P53044 361 aa1.84□□□□□ -2.12
UFD4YKL010C SMM1P53720 384 aaKnown RBP1.84□□□□□ -2.12
UFD4YKL010C YPL108WQ02872 168 aaPredicted RBP1.84□□□□□ -2.12
UFD4YKL010C CAB5Q03941 241 aa1.84□□□□□ -2.12
UFD4YKL010C YDR415CQ04033 374 aaPredicted RBP1.84□□□□□ -2.12
UFD4YKL010C AVO2Q04749 426 aa1.84□□□□□ -2.12
UFD4YKL010C IZH2Q12442 317 aa1.84□□□□□ -2.12
UFD4YKL010C MEK1P24719 497 aaPredicted RBP1.83□□□□□ -2.12
UFD4YKL010C YBR013CP38215 129 aa1.83□□□□□ -2.12
UFD4YKL010C UME6P39001 836 aa1.83□□□□□ -2.12
UFD4YKL010C JAC1P53193 184 aa1.83□□□□□ -2.12
UFD4YKL010C GMC1Q04399 608 aa1.83□□□□□ -2.12
UFD4YKL010C PML1Q07930 204 aaPredicted RBP1.83□□□□□ -2.12
UFD4YKL010C PIN2Q12057 282 aa1.83□□□□□ -2.12
UFD4YKL010C LSO2Q3E772 92 aaKnown RBP1.83□□□□□ -2.12
UFD4YKL010C COA6Q3E846 104 aa1.83□□□□□ -2.12
UFD4YKL010C MSW1P04803 379 aa1.83□□□□□ -2.12
UFD4YKL010C SPT15P13393 240 aaKnown RBP1.83□□□□□ -2.12
UFD4YKL010C ERV1P27882 189 aa1.83□□□□□ -2.12
UFD4YKL010C PTC7P38797 343 aa1.83□□□□□ -2.12
UFD4YKL010C OST1P41543 476 aaKnown RBP1.83□□□□□ -2.12
UFD4YKL010C YJR012CP47087 207 aa1.83□□□□□ -2.12
UFD4YKL010C TNA1P53322 534 aa1.83□□□□□ -2.12
UFD4YKL010C NRM1P53718 249 aa1.83□□□□□ -2.12
UFD4YKL010C YNR048WP53740 393 aa1.83□□□□□ -2.12
UFD4YKL010C RPL6AQ02326 176 aaKnown RBP1.83□□□□□ -2.12
UFD4YKL010C YDR248CQ03786 193 aa1.83□□□□□ -2.12
UFD4YKL010C FSH2Q05015 223 aa1.83□□□□□ -2.12
UFD4YKL010C PRP11Q07350 266 aaPredicted RBP1.83□□□□□ -2.12
UFD4YKL010C CSI2Q08054 341 aa1.83□□□□□ -2.12
UFD4YKL010C ERV2Q12284 196 aa1.83□□□□□ -2.12
UFD4YKL010C ADH3P07246 375 aaKnown RBP1.83□□□□□ -2.12
UFD4YKL010C ADH7P25377 361 aa1.83□□□□□ -2.12
UFD4YKL010C LAC1P28496 418 aa1.83□□□□□ -2.12
UFD4YKL010C SPI1P40092 148 aa1.83□□□□□ -2.12
UFD4YKL010C PAU4P53427 120 aa1.83□□□□□ -2.12
UFD4YKL010C BSC5P53755 489 aa1.83□□□□□ -2.12
UFD4YKL010C YML053CQ04978 212 aa1.83□□□□□ -2.12
UFD4YKL010C LAS17Q12446 633 aa1.83□□□□□ -2.12
UFD4YKL010C YBR255C-AQ3E776 120 aa1.83□□□□□ -2.12
UFD4YKL010C TDH3P00359 332 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
UFD4YKL010C TIR1P10863 254 aa1.83□□□□□ -2.12
UFD4YKL010C NHP6AP11632 93 aaKnown RBP1.83□□□□□ -2.12
UFD4YKL010C ERG8P24521 451 aa1.83□□□□□ -2.12
UFD4YKL010C NTF2P33331 125 aaKnown RBP1.83□□□□□ -2.12
UFD4YKL010C YJL193WP39542 402 aa1.83□□□□□ -2.12
UFD4YKL010C YIL029CP40538 142 aa1.83□□□□□ -2.12
UFD4YKL010C HNT2P49775 206 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms