RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W AZF1P41696 914 aa5.25□□□□□ -1.57
SKN1YGR143W YGR149WP48236 432 aa5.25□□□□□ -1.57
SKN1YGR143W PUS2P53167 370 aa5.25□□□□□ -1.57
SKN1YGR143W YGR015CP53208 328 aa5.25□□□□□ -1.57
SKN1YGR143W HHT1P61830 136 aa5.25□□□□□ -1.57
SKN1YGR143W LEE1Q02799 301 aaKnown RBP5.25□□□□□ -1.57
SKN1YGR143W MRPL51Q06090 140 aaPredicted RBP5.25□□□□□ -1.57
SKN1YGR143W PFA4Q12006 378 aa5.25□□□□□ -1.57
SKN1YGR143W BTS1Q12051 335 aa5.25□□□□□ -1.57
SKN1YGR143W NUS1Q12063 375 aa5.25□□□□□ -1.57
SKN1YGR143W MCT1Q12283 360 aa5.25□□□□□ -1.57
SKN1YGR143W HIS1P00498 297 aaKnown RBP5.24□□□□□ -1.57
SKN1YGR143W ILV5P06168 395 aaKnown RBP5.24□□□□□ -1.57
SKN1YGR143W RFA3P26755 122 aaKnown RBP5.24□□□□□ -1.57
SKN1YGR143W HOM6P31116 359 aaKnown RBP5.24□□□□□ -1.57
SKN1YGR143W RAD23P32628 398 aaKnown RBP5.24□□□□□ -1.57
SKN1YGR143W SLC1P33333 303 aa5.24□□□□□ -1.57
SKN1YGR143W ARO9P38840 513 aaPredicted RBP5.24□□□□□ -1.57
SKN1YGR143W MSY1P48527 492 aa5.24□□□□□ -1.57
SKN1YGR143W YLR050CQ12155 161 aaKnown RBP5.24□□□□□ -1.57
SKN1YGR143W SWM1Q12379 170 aa5.24□□□□□ -1.57
SKN1YGR143W YKL183C-AQ3E765 70 aa5.24□□□□□ -1.57
SKN1YGR143W IZH4Q99393 312 aa5.24□□□□□ -1.57
SKN1YGR143W STE7P06784 515 aa5.24□□□□□ -1.57
SKN1YGR143W YML003WP0CF16 290 aa5.24□□□□□ -1.57
SKN1YGR143W CTA1P15202 515 aa5.24□□□□□ -1.57
SKN1YGR143W GPI12P23797 304 aa5.24□□□□□ -1.57
SKN1YGR143W DSS4P32601 143 aa5.24□□□□□ -1.57
SKN1YGR143W YMC2P38087 329 aa5.24□□□□□ -1.57
SKN1YGR143W ASP1P38986 381 aaPredicted RBP5.24□□□□□ -1.57
SKN1YGR143W UME6P39001 836 aa5.24□□□□□ -1.57
SKN1YGR143W PEX7P39108 375 aa5.24□□□□□ -1.57
SKN1YGR143W YNL194CP40169 301 aa5.24□□□□□ -1.57
SKN1YGR143W YJL118WP47022 219 aa5.24□□□□□ -1.57
SKN1YGR143W BNA2P47125 453 aa5.24□□□□□ -1.57
SKN1YGR143W HST3P53687 447 aa5.24□□□□□ -1.57
SKN1YGR143W IRC15Q02733 499 aa5.24□□□□□ -1.57
SKN1YGR143W YPL062WQ02781 134 aa5.24□□□□□ -1.57
SKN1YGR143W YHM2Q04013 314 aa5.24□□□□□ -1.57
SKN1YGR143W FIT1Q04433 528 aa5.24□□□□□ -1.57
SKN1YGR143W CMR1Q12510 522 aaKnown RBP5.24□□□□□ -1.57
SKN1YGR143W FCY2P17064 533 aa5.23□□□□□ -1.57
SKN1YGR143W ERV1P27882 189 aa5.23□□□□□ -1.57
SKN1YGR143W KTI12P34253 313 aaKnown RBP5.23□□□□□ -1.57
SKN1YGR143W BTT1P40314 149 aaPredicted RBP5.23□□□□□ -1.57
SKN1YGR143W PRM5P40476 318 aa5.23□□□□□ -1.57
SKN1YGR143W YGR283CP53336 341 aaPredicted RBP5.23□□□□□ -1.57
SKN1YGR143W NUP100Q02629 959 aa5.23□□□□□ -1.57
SKN1YGR143W THI74Q04083 370 aa5.23□□□□□ -1.57
SKN1YGR143W YOR059CQ08448 450 aaKnown RBP5.23□□□□□ -1.57
SKN1YGR143W YOL114CQ12322 202 aa5.23□□□□□ -1.57
SKN1YGR143W YJR112W-AQ3E743 109 aa5.23□□□□□ -1.57
SKN1YGR143W YBL112CQ3E7Y4 105 aa5.23□□□□□ -1.57
SKN1YGR143W FAB1P34756 2278 aa5.23□□□□□ -1.57
SKN1YGR143W YDR157WA0A023PZE8 133 aa5.23□□□□□ -1.57
SKN1YGR143W RPS14AP06367 137 aaKnown RBP5.23□□□□□ -1.57
SKN1YGR143W SOR1P35497 357 aaKnown RBP5.23□□□□□ -1.57
SKN1YGR143W SFK1P35735 353 aa5.23□□□□□ -1.57
SKN1YGR143W IML3P38265 245 aa5.23□□□□□ -1.57
SKN1YGR143W RPS14BP39516 138 aaKnown RBP5.23□□□□□ -1.57
SKN1YGR143W YIF1P53845 314 aaKnown RBP5.23□□□□□ -1.57
SKN1YGR143W APJ1P53940 528 aa5.23□□□□□ -1.57
SKN1YGR143W ABF2Q02486 183 aa5.23□□□□□ -1.57
SKN1YGR143W SOR2Q07786 357 aa5.23□□□□□ -1.57
SKN1YGR143W SIA1Q12212 622 aa5.23□□□□□ -1.57
SKN1YGR143W YLR415CO13578 112 aa5.22□□□□□ -1.57
SKN1YGR143W URA10P30402 227 aa5.22□□□□□ -1.57
SKN1YGR143W THI80P35202 319 aa5.22□□□□□ -1.57
SKN1YGR143W PAN3P36102 679 aaPredicted RBP5.22□□□□□ -1.57
SKN1YGR143W FRM2P37261 193 aa5.22□□□□□ -1.57
SKN1YGR143W MED6P38782 295 aa5.22□□□□□ -1.57
SKN1YGR143W EMC5P40540 141 aa5.22□□□□□ -1.57
SKN1YGR143W SPG3Q04398 127 aaPredicted RBP5.22□□□□□ -1.57
SKN1YGR143W YML053CQ04978 212 aa5.22□□□□□ -1.57
SKN1YGR143W LIP2Q06005 328 aa5.22□□□□□ -1.57
SKN1YGR143W TDA6Q06466 467 aa5.22□□□□□ -1.57
SKN1YGR143W LOA1Q06508 300 aa5.22□□□□□ -1.57
SKN1YGR143W YPR174CQ06616 221 aaPredicted RBP5.22□□□□□ -1.57
SKN1YGR143W YOR387CQ08910 206 aa5.22□□□□□ -1.57
SKN1YGR143W POM34Q12445 299 aa5.22□□□□□ -1.57
SKN1YGR143W SEC4P07560 215 aaKnown RBP5.22□□□□□ -1.57
SKN1YGR143W YKR104WP0CE69 306 aa5.22□□□□□ -1.57
SKN1YGR143W SCO1P23833 295 aa5.22□□□□□ -1.57
SKN1YGR143W YPS6P40583 537 aa5.22□□□□□ -1.57
SKN1YGR143W YFL065CP43539 102 aa5.22□□□□□ -1.57
SKN1YGR143W YNR048WP53740 393 aa5.22□□□□□ -1.57
SKN1YGR143W GRH1Q04410 372 aaKnown RBP5.22□□□□□ -1.57
SKN1YGR143W OPI10Q08202 246 aa5.22□□□□□ -1.57
SKN1YGR143W YPR203WQ08994 102 aa5.22□□□□□ -1.57
SKN1YGR143W MCP1Q12106 302 aa5.22□□□□□ -1.57
SKN1YGR143W YEL009C-AA0A023PZF2 135 aa5.21□□□□□ -1.58
SKN1YGR143W ADH1P00330 348 aaKnown RBP5.21□□□□□ -1.58
SKN1YGR143W COX1P00401 534 aa5.21□□□□□ -1.58
SKN1YGR143W RPS31P05759 152 aaKnown RBP5.21□□□□□ -1.58
SKN1YGR143W UBI4P0CG63 381 aaKnown RBP5.21□□□□□ -1.58
SKN1YGR143W TY2A-FP0CX61 438 aa5.21□□□□□ -1.58
SKN1YGR143W TY2A-GR2P0CX62 438 aa5.21□□□□□ -1.58
SKN1YGR143W NFS1P25374 497 aa5.21□□□□□ -1.58
SKN1YGR143W MKK2P32491 506 aa5.21□□□□□ -1.58
SKN1YGR143W NNK1P36003 928 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms