RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W YDR248CQ03786 193 aa2.4□□□□□ -2.03
PRP18YGR006W SPC24Q04477 213 aa2.4□□□□□ -2.03
PRP18YGR006W YLR179CQ06252 201 aaKnown RBP2.4□□□□□ -2.03
PRP18YGR006W YNG1Q08465 219 aa2.4□□□□□ -2.03
PRP18YGR006W YLR126CQ12288 251 aa2.4□□□□□ -2.03
PRP18YGR006W BBP1Q12365 385 aa2.4□□□□□ -2.03
PRP18YGR006W YFH7P43591 353 aa2.39□□□□□ -2.03
PRP18YGR006W MNN5P46982 586 aa2.39□□□□□ -2.03
PRP18YGR006W BRR6P53062 197 aa2.39□□□□□ -2.03
PRP18YGR006W NSA1P53136 463 aaPredicted RBP2.39□□□□□ -2.03
PRP18YGR006W COS6P53344 381 aa2.39□□□□□ -2.03
PRP18YGR006W NRK1P53915 240 aa2.39□□□□□ -2.03
PRP18YGR006W INM2Q05533 292 aa2.39□□□□□ -2.03
PRP18YGR006W GRX8Q05926 109 aa2.39□□□□□ -2.03
PRP18YGR006W SEI1Q06058 285 aa2.39□□□□□ -2.03
PRP18YGR006W NOC4Q06512 552 aaPredicted RBP2.39□□□□□ -2.03
PRP18YGR006W TAF2P23255 1407 aa2.39□□□□□ -2.03
PRP18YGR006W BCY1P07278 416 aaKnown RBP2.38□□□□□ -2.03
PRP18YGR006W RPS28BP0C0X0 67 aaKnown RBP2.38□□□□□ -2.03
PRP18YGR006W CYC2P38909 366 aa2.38□□□□□ -2.03
PRP18YGR006W YER076CP40049 302 aa2.38□□□□□ -2.03
PRP18YGR006W YMR144WP40214 342 aaKnown RBP2.38□□□□□ -2.03
PRP18YGR006W ARC15P40518 154 aaRIP-Chip data2.38□□□□□ -2.03not detected
PRP18YGR006W CIN5P40917 295 aa2.38□□□□□ -2.03
PRP18YGR006W YJR056CP47115 236 aa2.38□□□□□ -2.03
PRP18YGR006W VMA10P48836 114 aaKnown RBP2.38□□□□□ -2.03
PRP18YGR006W NQM1P53228 333 aaPredicted RBP2.38□□□□□ -2.03
PRP18YGR006W YNL046WP53956 172 aa2.38□□□□□ -2.03
PRP18YGR006W ABF2Q02486 183 aa2.38□□□□□ -2.03
PRP18YGR006W YML096WQ04489 525 aa2.38□□□□□ -2.03
PRP18YGR006W YPR127WQ06494 345 aa2.38□□□□□ -2.03
PRP18YGR006W YLR031WQ07978 186 aa2.38□□□□□ -2.03
PRP18YGR006W YLR053CQ12026 108 aa2.38□□□□□ -2.03
PRP18YGR006W YOR283WQ12040 230 aaKnown RBP2.38□□□□□ -2.03
PRP18YGR006W USB1Q12208 290 aaKnown RBP2.38□□□□□ -2.03
PRP18YGR006W TPO4Q12256 659 aa2.38□□□□□ -2.03
PRP18YGR006W RPS28AQ3E7X9 67 aaPredicted RBP2.38□□□□□ -2.03
PRP18YGR006W ADH3P07246 375 aaKnown RBP2.37□□□□□ -2.03
PRP18YGR006W DSF1P0CX08 502 aa2.37□□□□□ -2.03
PRP18YGR006W YNR073CP0CX09 502 aa2.37□□□□□ -2.03
PRP18YGR006W PET54P10834 293 aa2.37□□□□□ -2.03
PRP18YGR006W DBF2P22204 572 aa2.37□□□□□ -2.03
PRP18YGR006W SCO1P23833 295 aa2.37□□□□□ -2.03
PRP18YGR006W MDH3P32419 343 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
PRP18YGR006W ERG24P32462 438 aaKnown RBP2.37□□□□□ -2.03
PRP18YGR006W CLG1P35190 452 aa2.37□□□□□ -2.03
PRP18YGR006W NUP49Q02199 472 aa2.37□□□□□ -2.03
PRP18YGR006W YMR279CQ03263 540 aa2.37□□□□□ -2.03
PRP18YGR006W CGI121Q03705 181 aaKnown RBP2.37□□□□□ -2.03
PRP18YGR006W ARO80Q04052 950 aa2.37□□□□□ -2.03
PRP18YGR006W YLR030WQ07967 263 aa2.37□□□□□ -2.03
PRP18YGR006W EMC6Q12431 108 aa2.37□□□□□ -2.03
PRP18YGR006W RPO41P13433 1351 aaKnown RBP2.36□□□□□ -2.03
PRP18YGR006W DRS2P39524 1355 aa2.36□□□□□ -2.03
PRP18YGR006W COX5AP00424 153 aa2.36□□□□□ -2.03
PRP18YGR006W IPP1P00817 287 aaKnown RBP2.36□□□□□ -2.03
PRP18YGR006W Q0255P03881 472 aa2.36□□□□□ -2.03
PRP18YGR006W MSA2P36157 363 aa2.36□□□□□ -2.03
PRP18YGR006W IRC18P47056 224 aa2.36□□□□□ -2.03
PRP18YGR006W ILM1P47155 203 aa2.36□□□□□ -2.03
PRP18YGR006W YGR026WP53217 278 aa2.36□□□□□ -2.03
PRP18YGR006W FYV6P53913 173 aa2.36□□□□□ -2.03
PRP18YGR006W YMR315WQ04869 349 aaKnown RBP2.36□□□□□ -2.03
PRP18YGR006W YLR036CQ07986 203 aa2.36□□□□□ -2.03
PRP18YGR006W YPL257WQ08974 193 aa2.36□□□□□ -2.03
PRP18YGR006W NSL1Q12143 216 aa2.36□□□□□ -2.03
PRP18YGR006W SKI3P17883 1432 aaKnown RBP2.35□□□□□ -2.03
PRP18YGR006W SPT3P06844 337 aa2.35□□□□□ -2.03
PRP18YGR006W ERD2P18414 219 aa2.35□□□□□ -2.03
PRP18YGR006W YHR125WP38831 101 aa2.35□□□□□ -2.03
PRP18YGR006W SNX4P47057 423 aa2.35□□□□□ -2.03
PRP18YGR006W YJR111CP47148 283 aaKnown RBP2.35□□□□□ -2.03
PRP18YGR006W MCM22P47167 239 aa2.35□□□□□ -2.03
PRP18YGR006W JAC1P53193 184 aa2.35□□□□□ -2.03
PRP18YGR006W RFU1Q08003 200 aa2.35□□□□□ -2.03
PRP18YGR006W YLR050CQ12155 161 aaKnown RBP2.35□□□□□ -2.03
PRP18YGR006W IGO2Q9P305 131 aa2.35□□□□□ -2.03
PRP18YGR006W HTL1Q9URQ5 78 aa2.35□□□□□ -2.03
PRP18YGR006W TRX3P25372 127 aa2.34□□□□□ -2.03
PRP18YGR006W TAH1P25638 111 aaPredicted RBP2.34□□□□□ -2.03
PRP18YGR006W UBC8P28263 218 aa2.34□□□□□ -2.03
PRP18YGR006W TCA17P32613 152 aa2.34□□□□□ -2.03
PRP18YGR006W YKR041WP36134 250 aa2.34□□□□□ -2.03
PRP18YGR006W ECM33P38248 429 aaKnown RBP2.34□□□□□ -2.03
PRP18YGR006W EDC3P39998 551 aaKnown RBP2.34□□□□□ -2.03
PRP18YGR006W FIS1P40515 155 aa2.34□□□□□ -2.03
PRP18YGR006W YGR201CP42936 225 aa2.34□□□□□ -2.03
PRP18YGR006W RCF2P53721 224 aa2.34□□□□□ -2.03
PRP18YGR006W PDR17P53844 350 aa2.34□□□□□ -2.03
PRP18YGR006W COG5P53951 403 aa2.34□□□□□ -2.03
PRP18YGR006W AIM34Q03673 198 aa2.34□□□□□ -2.03
PRP18YGR006W MHT1Q12525 324 aa2.34□□□□□ -2.03
PRP18YGR006W RAD50P12753 1312 aa2.34□□□□□ -2.04
PRP18YGR006W CDC28P00546 298 aaKnown RBP2.33□□□□□ -2.04
PRP18YGR006W OAC1P32332 324 aa2.33□□□□□ -2.04
PRP18YGR006W UPS2P35200 230 aa2.33□□□□□ -2.04
PRP18YGR006W SRY1P36007 326 aa2.33□□□□□ -2.04
PRP18YGR006W MRPL28P36527 147 aa2.33□□□□□ -2.04
PRP18YGR006W SLM6P38343 150 aa2.33□□□□□ -2.04
PRP18YGR006W FMP32P43557 207 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms