RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	SEC4	P07560	215 aa	Known RBP	5.01	□□□□□ -1.61
CHL4	YDR254W	MSI1	P13712	422 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	PHO85	P17157	305 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	SNC2	P33328	115 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	NAT2	P37293	288 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	HMF1	P40037	129 aa	Known RBP	5.01	□□□□□ -1.61
CHL4	YDR254W	HHO1	P53551	258 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	YML018C	Q03730	393 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	YAP7	Q08182	245 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	YGK3	Q12222	375 aa	Predicted RBP	5.01	□□□□□ -1.61
CHL4	YDR254W	PRM4	Q12498	284 aa		5.01	□□□□□ -1.61
CHL4	YDR254W	VPS15	P22219	1454 aa		5	□□□□□ -1.61
CHL4	YDR254W	SEC59	P20048	519 aa		5	□□□□□ -1.61
CHL4	YDR254W	MAK32	P23060	363 aa		5	□□□□□ -1.61
CHL4	YDR254W	YCR100C	P25606	316 aa		5	□□□□□ -1.61
CHL4	YDR254W	YKL102C	P34249	101 aa		5	□□□□□ -1.61
CHL4	YDR254W	ARN2	P38724	620 aa		5	□□□□□ -1.61
CHL4	YDR254W	ERV46	P39727	415 aa		5	□□□□□ -1.61
CHL4	YDR254W	LSM8	P47093	109 aa	Known RBP	5	□□□□□ -1.61
CHL4	YDR254W	XPT1	P47165	209 aa		5	□□□□□ -1.61
CHL4	YDR254W	AIF1	P52923	378 aa		5	□□□□□ -1.61
CHL4	YDR254W	CGI121	Q03705	181 aa	Known RBP	5	□□□□□ -1.61
CHL4	YDR254W	PAL1	Q05518	499 aa	Known RBP	5	□□□□□ -1.61
CHL4	YDR254W	MCH1	Q07376	486 aa		5	□□□□□ -1.61
CHL4	YDR254W	YOL160W	Q08321	113 aa		5	□□□□□ -1.61
CHL4	YDR254W	DGA1	Q08650	418 aa		5	□□□□□ -1.61
CHL4	YDR254W	PSK1	P31374	1356 aa		5	□□□□□ -1.61
CHL4	YDR254W	DOP1	Q03921	1698 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	SIR2	P06700	562 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	STP22	P25604	385 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	TIP1	P27654	210 aa	Predicted RBP	4.99	□□□□□ -1.61
CHL4	YDR254W	PTC1	P35182	281 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	YOR062C	P36025	268 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	SOL2	P37262	315 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	MED6	P38782	295 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	BAT1	P38891	393 aa	Known RBP	4.99	□□□□□ -1.61
CHL4	YDR254W	PEX17	P40155	199 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	GLR1	P41921	483 aa	Known RBP	4.99	□□□□□ -1.61
CHL4	YDR254W	RPA43	P46669	326 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	MDM34	P53083	459 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	YGL034C	P53186	121 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	YPR114W	Q06107	315 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	TIM18	Q08749	192 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	PFA4	Q12006	378 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	PDR18	P53756	1333 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	EDE1	P34216	1381 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	PAN1	P32521	1480 aa		4.99	□□□□□ -1.61
CHL4	YDR254W	ESP1	Q03018	1630 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	ADK1	P07170	222 aa	Known RBP	4.98	□□□□□ -1.61
CHL4	YDR254W	YPL073C	P40323	161 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	PAN6	P40459	309 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	MOB1	P40484	314 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	YGR018C	P53211	109 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	YGR039W	P53225	103 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	YNL046W	P53956	172 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	CRZ1	P53968	678 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	YDR366C	P87287	132 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	SDC1	Q03323	175 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	SLM3	Q12093	417 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	FCY1	Q12178	158 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	YLR118C	Q12354	227 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	YPL229W	Q99395	206 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	YPK9	Q12697	1472 aa		4.98	□□□□□ -1.61
CHL4	YDR254W	RPF1	P38805	295 aa	Known RBP	4.97	□□□□□ -1.61
CHL4	YDR254W	PET8	P38921	284 aa		4.97	□□□□□ -1.61
CHL4	YDR254W	YGR219W	P53307	113 aa		4.97	□□□□□ -1.61
CHL4	YDR254W	NRM1	P53718	249 aa		4.97	□□□□□ -1.61
CHL4	YDR254W	LOA1	Q06508	300 aa		4.97	□□□□□ -1.61
CHL4	YDR254W	IES4	Q08561	116 aa		4.97	□□□□□ -1.61
CHL4	YDR254W	STE7	P06784	515 aa		4.96	□□□□□ -1.62
CHL4	YDR254W	RPL16A	P26784	199 aa	Known RBP	4.96	□□□□□ -1.62
CHL4	YDR254W	PTM1	P32857	523 aa		4.96	□□□□□ -1.62
CHL4	YDR254W	AVT5	P38176	459 aa		4.96	□□□□□ -1.62
CHL4	YDR254W	YBR062C	P38239	180 aa		4.96	□□□□□ -1.62
CHL4	YDR254W	YHL044W	P38727	235 aa		4.96	□□□□□ -1.62
CHL4	YDR254W	TIF34	P40217	347 aa	Known RBP	4.96	□□□□□ -1.62
CHL4	YDR254W	IDP3	P53982	420 aa	Known RBP	4.96	□□□□□ -1.62
CHL4	YDR254W	SMX3	P54999	86 aa	Predicted RBP	4.96	□□□□□ -1.62
CHL4	YDR254W	AIM11	P87275	137 aa		4.96	□□□□□ -1.62
CHL4	YDR254W	ODC1	Q03028	310 aa		4.96	□□□□□ -1.62
CHL4	YDR254W	YOR376W	Q08900	122 aa		4.96	□□□□□ -1.62
CHL4	YDR254W	YOR342C	Q12182	319 aa		4.96	□□□□□ -1.62
CHL4	YDR254W	PRR2	Q12310	699 aa		4.96	□□□□□ -1.62
CHL4	YDR254W	YHR214C-E	Q8TGK0	99 aa		4.96	□□□□□ -1.62
CHL4	YDR254W	TY1B-PR2	P0C2J0	1756 aa		4.96	□□□□□ -1.62
CHL4	YDR254W	FMP49	A0A023PZB3	126 aa		4.95	□□□□□ -1.62
CHL4	YDR254W	VAR1	P02381	398 aa		4.95	□□□□□ -1.62
CHL4	YDR254W	RPL30	P14120	105 aa	Known RBP	4.95	□□□□□ -1.62
CHL4	YDR254W	MRPL20	P22354	195 aa	Predicted RBP	4.95	□□□□□ -1.62
CHL4	YDR254W	SPO13	P23624	291 aa		4.95	□□□□□ -1.62
CHL4	YDR254W	POP8	P38208	133 aa		4.95	□□□□□ -1.62
CHL4	YDR254W	YHL049C	P38722	271 aa		4.95	□□□□□ -1.62
CHL4	YDR254W	YHL026C	P38740	315 aa		4.95	□□□□□ -1.62
CHL4	YDR254W	NUP100	Q02629	959 aa		4.95	□□□□□ -1.62
CHL4	YDR254W	DIG2	Q03373	323 aa	Known RBP	4.95	□□□□□ -1.62
CHL4	YDR254W	FCF2	Q12035	217 aa	Predicted RBP	4.95	□□□□□ -1.62
CHL4	YDR254W	MPD1	Q12404	318 aa	Known RBP	4.95	□□□□□ -1.62
CHL4	YDR254W	BOL1	Q3E793	110 aa		4.95	□□□□□ -1.62
CHL4	YDR254W	YBL112C	Q3E7Y4	105 aa		4.95	□□□□□ -1.62
CHL4	YDR254W	YCR024C-B	Q3E7Z8	88 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms