RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	LSM3	P57743	89 aa	Known RBP	4.97	□□□□□ -1.61
TRP1	YDR007W	YDR366C	P87287	132 aa		4.97	□□□□□ -1.61
TRP1	YDR007W	PRP38	Q00723	242 aa	Predicted RBP	4.97	□□□□□ -1.61
TRP1	YDR007W	RSM10	Q03201	203 aa		4.97	□□□□□ -1.61
TRP1	YDR007W	SDO1	Q07953	250 aa	Known RBP	4.97	□□□□□ -1.61
TRP1	YDR007W	POM33	Q12164	279 aa		4.97	□□□□□ -1.61
TRP1	YDR007W	ERV2	Q12284	196 aa		4.97	□□□□□ -1.61
TRP1	YDR007W	TFC7	Q12415	435 aa		4.97	□□□□□ -1.61
TRP1	YDR007W	ADH2	P00331	348 aa	Known RBP	4.96	□□□□□ -1.62
TRP1	YDR007W	COX5B	P00425	151 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	RPL9A	P05738	191 aa	Known RBP	4.96	□□□□□ -1.62
TRP1	YDR007W	PBN1	P25580	416 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	EMP24	P32803	203 aa	Known RBP	4.96	□□□□□ -1.62
TRP1	YDR007W	SRY1	P36007	326 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	SDH4	P37298	181 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	SHE3	P38272	425 aa	Known RBP	4.96	□□□□□ -1.62
TRP1	YDR007W	GAA1	P39012	614 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	GCV3	P39726	170 aa	Predicted RBP	4.96	□□□□□ -1.62
TRP1	YDR007W	COG3	P40094	801 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	YFL040W	P43562	540 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	CIN2	P46670	268 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	YJR012C	P47087	207 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	YJR149W	P47177	404 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	SOL1	P50278	321 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	RPL9B	P51401	191 aa	Known RBP	4.96	□□□□□ -1.62
TRP1	YDR007W	MPC1	P53157	130 aa	Known RBP	4.96	□□□□□ -1.62
TRP1	YDR007W	MST27	P53176	234 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	TIM21	P53220	239 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	RNY1	Q02933	434 aa	Known RBP	4.96	□□□□□ -1.62
TRP1	YDR007W	SNO1	Q03144	224 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	HPT1	Q04178	221 aa	Known RBP	4.96	□□□□□ -1.62
TRP1	YDR007W	LDB18	Q07887	179 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	MRX4	Q12467	430 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	PRM4	Q12498	284 aa		4.96	□□□□□ -1.62
TRP1	YDR007W	MYO1	P08964	1928 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	RPB3	P16370	318 aa	Known RBP	4.95	□□□□□ -1.62
TRP1	YDR007W	PEX34	P25584	144 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	SUA7	P29055	345 aa	Predicted RBP	4.95	□□□□□ -1.62
TRP1	YDR007W	PEX4	P29340	183 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	SFC1	P33303	322 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	TMA19	P35691	167 aa	Known RBP	4.95	□□□□□ -1.62
TRP1	YDR007W	MRPL28	P36527	147 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	DTR1	P38125	572 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	AME1	P38313	324 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	KRE9	P39005	276 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	SPO73	P40031	143 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	DFG10	P40526	253 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	VMA21	P41806	77 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	TAD2	P47058	250 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	DAN1	P47178	298 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	TRM9	P49957	279 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	AIF1	P52923	378 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	SAY1	P53324	424 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	MPP6	P53725	186 aa	Predicted RBP	4.95	□□□□□ -1.62
TRP1	YDR007W	NRK1	P53915	240 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	ASI3	P53983	676 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	HRI1	Q05905	244 aa	Known RBP	4.95	□□□□□ -1.62
TRP1	YDR007W	HRD1	Q08109	551 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	RAD28	Q12021	506 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	SIA1	Q12212	622 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	YPR145C-A	Q2V2P0	78 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	WIP1	Q2V2P8	89 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	YMR030W-A	Q3E760	96 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	PET20	Q99373	253 aa		4.95	□□□□□ -1.62
TRP1	YDR007W	FKS1	P38631	1876 aa	Known RBP	4.94	□□□□□ -1.62
TRP1	YDR007W	HEM4	P06174	275 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	SPT15	P13393	240 aa	Known RBP	4.94	□□□□□ -1.62
TRP1	YDR007W	RPB5	P20434	215 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	GPI12	P23797	304 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	YCR090C	P25654	182 aa	Known RBP	4.94	□□□□□ -1.62
TRP1	YDR007W	CLB6	P32943	380 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	CSE2	P33308	149 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	ASP1	P38986	381 aa	Predicted RBP	4.94	□□□□□ -1.62
TRP1	YDR007W	YFR057W	P43625	151 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	YAR1	P46683	200 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	SDT1	P53078	280 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	PRM8	P53174	237 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	SHY1	P53266	389 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	GTR2	P53290	341 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	TIM13	P53299	105 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	FMP41	P53889	259 aa	Known RBP	4.94	□□□□□ -1.62
TRP1	YDR007W	FIT1	Q04433	528 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	SEN15	Q04675	128 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	INM2	Q05533	292 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	PEX30	Q06169	523 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	YLR446W	Q06204	433 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	YLR179C	Q06252	201 aa	Known RBP	4.94	□□□□□ -1.62
TRP1	YDR007W	CTS2	Q06350	511 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	MMT2	Q08970	484 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	SRO7	Q12038	1033 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	TPO4	Q12256	659 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	WTM1	Q12363	437 aa	Known RBP	4.94	□□□□□ -1.62
TRP1	YDR007W	BI3	Q9ZZW7	517 aa		4.94	□□□□□ -1.62
TRP1	YDR007W	YEL009C-A	A0A023PZF2	135 aa		4.93	□□□□□ -1.62
TRP1	YDR007W	TIM9	O74700	87 aa		4.93	□□□□□ -1.62
TRP1	YDR007W	YCR099C	P25657	155 aa		4.93	□□□□□ -1.62
TRP1	YDR007W	ADE1	P27616	306 aa		4.93	□□□□□ -1.62
TRP1	YDR007W	SNC2	P33328	115 aa		4.93	□□□□□ -1.62
TRP1	YDR007W	MSN4	P33749	630 aa		4.93	□□□□□ -1.62
TRP1	YDR007W	YHR035W	P38769	630 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms