RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W LSM4P40070 187 aaKnown RBP2.32□□□□□ -2.04
SWD3YBR175W YJL028WP47062 111 aa2.32□□□□□ -2.04
SWD3YBR175W YGL262WP53054 175 aa2.32□□□□□ -2.04
SWD3YBR175W YGL118CP53132 145 aa2.32□□□□□ -2.04
SWD3YBR175W ACT1P60010 375 aaKnown RBP2.32□□□□□ -2.04
SWD3YBR175W YPL039WQ03080 316 aa2.32□□□□□ -2.04
SWD3YBR175W YMR317WQ04893 1140 aa2.32□□□□□ -2.04
SWD3YBR175W YPR127WQ06494 345 aa2.32□□□□□ -2.04
SWD3YBR175W YLR030WQ07967 263 aa2.32□□□□□ -2.04
SWD3YBR175W YOL029CQ08187 201 aa2.32□□□□□ -2.04
SWD3YBR175W YOL160WQ08321 113 aa2.32□□□□□ -2.04
SWD3YBR175W YPS3Q12303 508 aa2.32□□□□□ -2.04
SWD3YBR175W PEX11Q12462 236 aa2.32□□□□□ -2.04
SWD3YBR175W DFM1Q12743 341 aaKnown RBP2.32□□□□□ -2.04
SWD3YBR175W YDL085C-AQ3E7B7 68 aaKnown RBP2.32□□□□□ -2.04
SWD3YBR175W YHR214C-EQ8TGK0 99 aa2.32□□□□□ -2.04
SWD3YBR175W NUP157P40064 1391 aaKnown RBP2.32□□□□□ -2.04
SWD3YBR175W CCH1P50077 2039 aa2.32□□□□□ -2.04
SWD3YBR175W GCN1P33892 2672 aaKnown RBP2.32□□□□□ -2.04
SWD3YBR175W RPO21P04050 1733 aaKnown RBP2.31□□□□□ -2.04
SWD3YBR175W RPL25P04456 142 aaKnown RBP2.31□□□□□ -2.04
SWD3YBR175W PET54P10834 293 aa2.31□□□□□ -2.04
SWD3YBR175W YHL044WP38727 235 aa2.31□□□□□ -2.04
SWD3YBR175W KRE9P39005 276 aa2.31□□□□□ -2.04
SWD3YBR175W MIC19P43594 170 aa2.31□□□□□ -2.04
SWD3YBR175W COQ5P49017 307 aa2.31□□□□□ -2.04
SWD3YBR175W FLC3P53121 802 aa2.31□□□□□ -2.04
SWD3YBR175W YML108WQ03759 105 aa2.31□□□□□ -2.04
SWD3YBR175W DYN3Q04949 312 aa2.31□□□□□ -2.04
SWD3YBR175W NNT1Q05874 261 aa2.31□□□□□ -2.04
SWD3YBR175W RRG7Q08774 242 aaPredicted RBP2.31□□□□□ -2.04
SWD3YBR175W ATG5Q12380 294 aa2.31□□□□□ -2.04
SWD3YBR175W RDI1Q12434 202 aa2.31□□□□□ -2.04
SWD3YBR175W POL1P13382 1468 aa2.31□□□□□ -2.04
SWD3YBR175W TOR2P32600 2474 aaKnown RBP2.31□□□□□ -2.04
SWD3YBR175W CHC1P22137 1653 aaKnown RBP2.31□□□□□ -2.04
SWD3YBR175W SIR2P06700 562 aa2.3□□□□□ -2.04
SWD3YBR175W CMD1P06787 147 aaKnown RBP2.3□□□□□ -2.04
SWD3YBR175W RPS24AP0CX31 135 aaKnown RBP2.3□□□□□ -2.04
SWD3YBR175W RPS24BP0CX32 135 aaKnown RBP2.3□□□□□ -2.04
SWD3YBR175W EPT1P22140 391 aa2.3□□□□□ -2.04
SWD3YBR175W SEC22P22214 214 aa2.3□□□□□ -2.04
SWD3YBR175W YCR090CP25654 182 aaKnown RBP2.3□□□□□ -2.04
SWD3YBR175W YBL081WP38180 368 aaKnown RBP2.3□□□□□ -2.04
SWD3YBR175W DOG2P38773 246 aa2.3□□□□□ -2.04
SWD3YBR175W ASP1P38986 381 aaPredicted RBP2.3□□□□□ -2.04
SWD3YBR175W RMD6P39975 231 aa2.3□□□□□ -2.04
SWD3YBR175W HMF1P40037 129 aaKnown RBP2.3□□□□□ -2.04
SWD3YBR175W RRT13P40042 185 aa2.3□□□□□ -2.04
SWD3YBR175W YER189WP40104 122 aa2.3□□□□□ -2.04
SWD3YBR175W RSM25P40496 264 aa2.3□□□□□ -2.04
SWD3YBR175W SYS1P41544 203 aa2.3□□□□□ -2.04
SWD3YBR175W EAF6P47128 113 aa2.3□□□□□ -2.04
SWD3YBR175W YGR042WP53227 271 aa2.3□□□□□ -2.04
SWD3YBR175W YGR050CP53231 118 aa2.3□□□□□ -2.04
SWD3YBR175W COS6P53344 381 aa2.3□□□□□ -2.04
SWD3YBR175W HST4P53688 370 aa2.3□□□□□ -2.04
SWD3YBR175W ECM19Q06011 112 aa2.3□□□□□ -2.04
SWD3YBR175W NOT5Q12514 560 aaPredicted RBP2.3□□□□□ -2.04
SWD3YBR175W TY1B-HO13535 1793 aa2.3□□□□□ -2.04
SWD3YBR175W TY1B-DR5P0C2I2 1755 aa2.3□□□□□ -2.04
SWD3YBR175W TY1B-DR6P0C2I3 1755 aa2.3□□□□□ -2.04
SWD3YBR175W TY1B-LR2P0C2I5 1755 aa2.3□□□□□ -2.04
SWD3YBR175W TY1B-LR3P0C2I6 1755 aaKnown RBP2.3□□□□□ -2.04
SWD3YBR175W TY1B-PR1P0C2I9 1755 aaKnown RBP2.3□□□□□ -2.04
SWD3YBR175W TY1B-PR2P0C2J0 1756 aa2.3□□□□□ -2.04
SWD3YBR175W TY1B-PR3P0C2J1 1755 aaKnown RBP2.3□□□□□ -2.04
SWD3YBR175W TY1B-JR1P47098 1755 aa2.3□□□□□ -2.04
SWD3YBR175W TY1B-ML2Q03434 1755 aaKnown RBP2.3□□□□□ -2.04
SWD3YBR175W TY1B-ER1Q03612 1755 aa2.3□□□□□ -2.04
SWD3YBR175W TY1B-ML1Q04711 1755 aaKnown RBP2.3□□□□□ -2.04
SWD3YBR175W TY1B-GR2Q12269 1755 aa2.3□□□□□ -2.04
SWD3YBR175W TY1B-OLQ12273 1755 aa2.3□□□□□ -2.04
SWD3YBR175W TY1B-PLQ12414 1755 aaKnown RBP2.3□□□□□ -2.04
SWD3YBR175W TAO3P40468 2376 aa2.3□□□□□ -2.04
SWD3YBR175W YIL177CP40434 1758 aa2.29□□□□□ -2.04
SWD3YBR175W YJL225CP40889 1758 aa2.29□□□□□ -2.04
SWD3YBR175W CDC7P06243 507 aa2.29□□□□□ -2.04
SWD3YBR175W SNF4P12904 322 aa2.29□□□□□ -2.04
SWD3YBR175W SCO1P23833 295 aa2.29□□□□□ -2.04
SWD3YBR175W SEC14P24280 304 aaKnown RBP2.29□□□□□ -2.04
SWD3YBR175W YCR023CP25351 611 aa2.29□□□□□ -2.04
SWD3YBR175W RPB9P27999 122 aa2.29□□□□□ -2.04
SWD3YBR175W UBC8P28263 218 aa2.29□□□□□ -2.04
SWD3YBR175W ERG24P32462 438 aaKnown RBP2.29□□□□□ -2.04
SWD3YBR175W YIL054WP40524 105 aa2.29□□□□□ -2.04
SWD3YBR175W FMP32P43557 207 aa2.29□□□□□ -2.04
SWD3YBR175W MOG1P47123 218 aa2.29□□□□□ -2.04
SWD3YBR175W COG5P53951 403 aa2.29□□□□□ -2.04
SWD3YBR175W MAK3Q03503 176 aa2.29□□□□□ -2.04
SWD3YBR175W HNT1Q04344 158 aaKnown RBP2.29□□□□□ -2.04
SWD3YBR175W YLR031WQ07978 186 aa2.29□□□□□ -2.04
SWD3YBR175W SLD7Q08457 257 aa2.29□□□□□ -2.04
SWD3YBR175W YBL112CQ3E7Y4 105 aa2.29□□□□□ -2.04
SWD3YBR175W YAL067W-AQ8TGK6 75 aa2.29□□□□□ -2.04
SWD3YBR175W HTL1Q9URQ5 78 aa2.29□□□□□ -2.04
SWD3YBR175W FLO11P08640 1367 aa2.28□□□□□ -2.04
SWD3YBR175W COX4P04037 155 aa2.28□□□□□ -2.04
SWD3YBR175W MAG1P22134 296 aaKnown RBP2.28□□□□□ -2.04
SWD3YBR175W AHC2P25649 128 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms