RNA–Protein interactions for RNA: ENST00000642088.1

CASC19-278, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,091 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-278ENST00000642088 TSPAN17Q96FV3 270 aa4.91□□□□□ -1.62
CASC19-278ENST00000642088 PEX11GQ96HA9 241 aa4.91□□□□□ -1.62
CASC19-278ENST00000642088 TTC1Q99614 292 aa4.91□□□□□ -1.62
CASC19-278ENST00000642088 SLC6A17Q9H1V8 727 aa4.91□□□□□ -1.62
CASC19-278ENST00000642088 ZMAT4Q9H898 229 aa4.91□□□□□ -1.62
CASC19-278ENST00000642088 EPB41L4AQ9HCS5 686 aaPredicted RBP4.91□□□□□ -1.62
CASC19-278ENST00000642088 RBM28Q9NW13 759 aaKnown RBP4.91□□□□□ -1.62
CASC19-278ENST00000642088 DDX56Q9NY93 547 aaKnown RBP4.91□□□□□ -1.62
CASC19-278ENST00000642088 ARPP21Q9UBL0 812 aaPredicted RBP4.91□□□□□ -1.62
CASC19-278ENST00000642088 RCOR1Q9UKL0 485 aa4.91□□□□□ -1.62
CASC19-278ENST00000642088 CLIC4Q9Y696 253 aa4.91□□□□□ -1.62
CASC19-278ENST00000642088 ATP23Q9Y6H3 246 aa4.91□□□□□ -1.62
CASC19-278ENST00000642088 NEDD4P46934 1319 aa4.91□□□□□ -1.62
CASC19-278ENST00000642088 GOLGB1Q14789 3259 aaKnown RBP4.91□□□□□ -1.62
CASC19-278ENST00000642088 GAS7O60861 476 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 BBOX1O75936 387 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 BAG3O95817 575 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 MARCKSP29966 332 aaPredicted RBP4.9□□□□□ -1.62
CASC19-278ENST00000642088 ZNF75DP51815 510 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 SMAD3P84022 425 aaKnown RBP4.9□□□□□ -1.62
CASC19-278ENST00000642088 NFIXQ14938 502 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 PDCD1Q15116 288 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 STK38Q15208 465 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 SAFBQ15424 915 aaKnown RBP eCLIP4.9□□□□□ -1.62
CASC19-278ENST00000642088 SMAD2Q15796 467 aaKnown RBP4.9□□□□□ -1.62
CASC19-278ENST00000642088 PTPN21Q16825 1174 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 PAN2Q504Q3 1202 aaKnown RBP4.9□□□□□ -1.62
CASC19-278ENST00000642088 SBK1Q52WX2 424 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 RRP12Q5JTH9 1297 aaKnown RBP4.9□□□□□ -1.62
CASC19-278ENST00000642088 ZNF772Q68DY9 489 aaPredicted RBP4.9□□□□□ -1.62
CASC19-278ENST00000642088 TEPPQ6URK8 271 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 DZIP1Q86YF9 867 aaKnown RBP4.9□□□□□ -1.62
CASC19-278ENST00000642088 MIB1Q86YT6 1006 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 AHI1Q8N157 1196 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 USP7Q93009 1102 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 C16orf45Q96MC5 204 aaPredicted RBP4.9□□□□□ -1.62
CASC19-278ENST00000642088 AP5M1Q9H0R1 490 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 IFT22Q9H7X7 185 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 LY9Q9HBG7 655 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 SLC39A2Q9NP94 309 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 TOMM22Q9NS69 142 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 RTEL1Q9NZ71 1219 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 BTBD7Q9P203 1132 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 PCDHA7Q9UN72 937 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 PCDHA5Q9Y5H7 936 aa4.9□□□□□ -1.62
CASC19-278ENST00000642088 COL11A2P13942 1736 aaPredicted RBP4.9□□□□□ -1.62
CASC19-278ENST00000642088 PRAMEF25A6NGN4 478 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 SMIM22K7EJ46 135 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 GSTA4O15217 222 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 PRKAB2O43741 272 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 RRP9O43818 475 aaKnown RBP4.9□□□□□ -1.63
CASC19-278ENST00000642088 ORC4O43929 436 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 KINO60870 393 aaKnown RBP4.9□□□□□ -1.63
CASC19-278ENST00000642088 DEXIO95424 95 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 NPTXRO95502 500 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 KRT1P04264 644 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 SERPINB2P05120 415 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 TPM3P06753 285 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 IFNAR1P17181 557 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 TM4SF1P30408 202 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 LIMS1P48059 325 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 GUCY2FP51841 1108 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 NDUFA8P51970 172 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 IGBP1P78318 339 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 AKAP17AQ02040 695 aaKnown RBP4.9□□□□□ -1.63
CASC19-278ENST00000642088 ATP13A4Q4VNC1 1196 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 PRR5LQ6MZQ0 368 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 UNQ6494/PRO21346Q6UXR6 183 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 AOPEPQ8N6M6 819 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 MIGA1Q8NAN2 632 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 TBC1D22AQ8WUA7 517 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 ASB15Q8WXK1 588 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 ALG3Q92685 438 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 NSUN4Q96CB9 384 aaKnown RBP4.9□□□□□ -1.63
CASC19-278ENST00000642088 FOXRED1Q96CU9 486 aaPredicted RBP4.9□□□□□ -1.63
CASC19-278ENST00000642088 NOX5Q96PH1 765 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 CRAMP1Q96RY5 1269 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 RIOK1Q9BRS2 568 aaKnown RBP4.9□□□□□ -1.63
CASC19-278ENST00000642088 TMX4Q9H1E5 349 aaPredicted RBP4.9□□□□□ -1.63
CASC19-278ENST00000642088 PRDM12Q9H4Q4 367 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 ZNF287Q9HBT7 754 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 TOPORSQ9NS56 1045 aaPredicted RBP4.9□□□□□ -1.63
CASC19-278ENST00000642088 CLIP2Q9UDT6 1046 aa4.9□□□□□ -1.63
CASC19-278ENST00000642088 GOLGA6L6A8MZA4 724 aa4.89□□□□□ -1.63
CASC19-278ENST00000642088 GOLGA6L19H0YKK7 550 aa4.89□□□□□ -1.63
CASC19-278ENST00000642088 CLASP2O75122 1294 aaKnown RBP4.89□□□□□ -1.63
CASC19-278ENST00000642088 GYS1P13807 737 aa4.89□□□□□ -1.63
CASC19-278ENST00000642088 RBM6P78332 1123 aaKnown RBP4.89□□□□□ -1.63
CASC19-278ENST00000642088 MECOMQ03112 1051 aa4.89□□□□□ -1.63
CASC19-278ENST00000642088 CRY2Q49AN0 593 aa4.89□□□□□ -1.63
CASC19-278ENST00000642088 CD276Q5ZPR3 534 aa4.89□□□□□ -1.63
CASC19-278ENST00000642088 ADALQ6DHV7 355 aa4.89□□□□□ -1.63
CASC19-278ENST00000642088 TMC5Q6UXY8 1006 aa4.89□□□□□ -1.63
CASC19-278ENST00000642088 RBM43Q6ZSC3 357 aaKnown RBP4.89□□□□□ -1.63
CASC19-278ENST00000642088 PTF1AQ7RTS3 328 aa4.89□□□□□ -1.63
CASC19-278ENST00000642088 CATIPQ7Z7H3 387 aa4.89□□□□□ -1.63
CASC19-278ENST00000642088 LDHDQ86WU2 507 aa4.89□□□□□ -1.63
CASC19-278ENST00000642088 CBARPQ8N350 705 aaPredicted RBP4.89□□□□□ -1.63
CASC19-278ENST00000642088 TDRD7Q8NHU6 1098 aaKnown RBP4.89□□□□□ -1.63
CASC19-278ENST00000642088 KIAA1524Q8TCG1 905 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms