RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 CXCL16Q9H2A7 254 aa8.66□□□□□ -1.02
PHGDH-217ENST00000641455 TRPV4Q9HBA0 871 aa8.66□□□□□ -1.02
PHGDH-217ENST00000641455 XPNPEP1Q9NQW7 623 aa8.66□□□□□ -1.02
PHGDH-217ENST00000641455 GDAQ9Y2T3 454 aa8.66□□□□□ -1.02
PHGDH-217ENST00000641455 NUP205Q92621 2012 aa8.66□□□□□ -1.02
PHGDH-217ENST00000641455 KIF26AQ9ULI4 1882 aaPredicted RBP8.66□□□□□ -1.02
PHGDH-217ENST00000641455 GCN1Q92616 2671 aaKnown RBP8.65□□□□□ -1.02
PHGDH-217ENST00000641455 SPAARA0A1B0GVQ0 90 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 A0A1W2PRU2 124 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 H7C4K7 107 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 TMEM189-UBE2V1I3L0A0 370 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 N4BP3O15049 544 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 ZBTB39O15060 712 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 PRPF3O43395 683 aaKnown RBP8.65□□□□□ -1.02
PHGDH-217ENST00000641455 ABLIM3O94929 683 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 RDXP35241 583 aaKnown RBP8.65□□□□□ -1.02
PHGDH-217ENST00000641455 SIM1P81133 766 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-217ENST00000641455 CYP4A11Q02928 519 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 TNK2Q07912 1038 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 FCHO2Q0JRZ9 810 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 GRSF1Q12849 480 aaKnown RBP eCLIP8.65□□□□□ -1.02
PHGDH-217ENST00000641455 PPP2R5CQ13362 524 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 RNF20Q5VTR2 975 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 SLC8B1Q6J4K2 584 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 DHX32Q7L7V1 743 aaKnown RBP8.65□□□□□ -1.02
PHGDH-217ENST00000641455 CYP2U1Q7Z449 544 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 PROSER1Q86XN7 944 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 C4orf19Q8IY42 314 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 DYDC2Q96IM9 177 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 TMEM209Q96SK2 561 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 ADPGKQ9BRR6 497 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 SLC26A6Q9BXS9 759 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 LSG1Q9H089 658 aaKnown RBP8.65□□□□□ -1.02
PHGDH-217ENST00000641455 POLR3FQ9H1D9 316 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-217ENST00000641455 ZSWIM4Q9H7M6 989 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 GOLGA2P5Q9HBQ8 144 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 ANO2Q9NQ90 1003 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 POLR3BQ9NW08 1133 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-217ENST00000641455 RGL1Q9NZL6 768 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 CEP72Q9P209 647 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 INVSQ9Y283 1065 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 GPSM3Q9Y4H4 160 aa8.65□□□□□ -1.02
PHGDH-217ENST00000641455 ASCC3Q8N3C0 2202 aaKnown RBP8.65□□□□□ -1.03
PHGDH-217ENST00000641455 CYP3A7-CYP3A51PA0A087WV96 503 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 PATE3B3GLJ2 98 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 SLC37A4O43826 429 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 RNF40O75150 1001 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 CPB1P15086 417 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 GLRA2P23416 452 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 CYP3A7P24462 503 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 MAPK8P45983 427 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 RCAN1P53805 252 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 POU5F1BQ06416 359 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 PTPAQ15257 358 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 EPHA7Q15375 998 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 NAB2Q15742 525 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 ITPRIPL2Q3MIP1 535 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 CTXN3Q4LDR2 81 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 STXBP5Q5T5C0 1151 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 TPGS2Q68CL5 300 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 MAEAQ7L5Y9 396 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 ARID3BQ8IVW6 561 aaPredicted RBP8.64□□□□□ -1.03
PHGDH-217ENST00000641455 ZBTB8OSQ8IWT0 167 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 TPH2Q8IWU9 490 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 CAMKK1Q8N5S9 505 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 PIGKQ92643 395 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 UROC1Q96N76 676 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 PDZD7Q9H5P4 517 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 PRMT7Q9NVM4 692 aaPredicted RBP8.64□□□□□ -1.03
PHGDH-217ENST00000641455 FBXL5Q9UKA1 691 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 VAV3Q9UKW4 847 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 NUB1Q9Y5A7 615 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 AKAP13Q12802 2813 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 THADAQ6YHU6 1953 aa8.64□□□□□ -1.03
PHGDH-217ENST00000641455 DSPP15924 2871 aaKnown RBP8.63□□□□□ -1.03
PHGDH-217ENST00000641455 ABCA7Q8IZY2 2146 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 CACNA1EQ15878 2313 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 CDX4O14627 284 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-217ENST00000641455 USO1O60763 962 aaKnown RBP8.63□□□□□ -1.03
PHGDH-217ENST00000641455 DGAT1O75907 488 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 APBB3O95704 486 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 ARL2P36404 184 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 DHPSP49366 369 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-217ENST00000641455 DGKEP52429 567 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 EPHA5P54756 1037 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 IRX4P78413 519 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 PLCB2Q00722 1185 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 EXOSC10Q01780 885 aaKnown RBP8.63□□□□□ -1.03
PHGDH-217ENST00000641455 PRPF4BQ13523 1007 aaKnown RBP8.63□□□□□ -1.03
PHGDH-217ENST00000641455 AAMPQ13685 434 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 NECTIN1Q15223 517 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 UPP1Q16831 310 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 INF2Q27J81 1249 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 FSTL4Q6MZW2 842 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 ZNF280DQ6N043 979 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 MOXD1Q6UVY6 613 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 CHCHD4Q8N4Q1 142 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 C3orf58Q8NDZ4 430 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 BPIFB1Q8TDL5 484 aa8.63□□□□□ -1.03
PHGDH-217ENST00000641455 HNRNPLLQ8WVV9 542 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms