RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 PPP2R3AQ06190 1150 aa15.16■□□□□ 0.02
LINC00339-211ENST00000641009 PTPAQ15257 358 aa15.16■□□□□ 0.02
LINC00339-211ENST00000641009 CTXN3Q4LDR2 81 aa15.16■□□□□ 0.02
LINC00339-211ENST00000641009 FAM173BQ6P4H8 233 aa15.16■□□□□ 0.02
LINC00339-211ENST00000641009 SLC39A4Q6P5W5 647 aa15.16■□□□□ 0.02
LINC00339-211ENST00000641009 RTL10Q7L3V2 364 aa15.16■□□□□ 0.02
LINC00339-211ENST00000641009 LARP4BQ92615 738 aaKnown RBP15.16■□□□□ 0.02
LINC00339-211ENST00000641009 FIZ1Q96SL8 496 aa15.16■□□□□ 0.02
LINC00339-211ENST00000641009 CCSER1Q9C0I3 900 aa15.16■□□□□ 0.02
LINC00339-211ENST00000641009 ARHGEF37A1IGU5 675 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 LACTBL1A8MY62 500 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 H7C4K7 107 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 OGTO15294 1046 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 TBCAO75347 108 aaKnown RBP15.15■□□□□ 0.02
LINC00339-211ENST00000641009 SEC24AO95486 1093 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 PIGRP01833 764 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 LRG1P02750 347 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 RHOP08100 348 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 ATF2P15336 505 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 PDCP20941 246 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 RFX1P22670 979 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 GUCY2FP51841 1108 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 RESTQ13127 1097 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 ZBTB6Q15916 424 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 ENOX2Q16206 610 aaKnown RBP15.15■□□□□ 0.02
LINC00339-211ENST00000641009 SLC5A9Q2M3M2 681 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 NPAS3Q8IXF0 933 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 RTP3Q9BQQ7 232 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 MSTO1Q9BUK6 570 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 TBC1D17Q9HA65 648 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 CYP4F11Q9HBI6 524 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 SLC2A4RGQ9NR83 387 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 KCNH3Q9ULD8 1083 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 PCDHB8Q9UN66 801 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 MRPS23Q9Y3D9 190 aaKnown RBP15.15■□□□□ 0.02
LINC00339-211ENST00000641009 FAM186AA6NE01 2351 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 PATJQ8NI35 1801 aa15.15■□□□□ 0.02
LINC00339-211ENST00000641009 A0A0B4J269 797 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 SYT1P21579 422 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 LRPAP1P30533 357 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 DDIT3P35638 169 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 GPC5P78333 572 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 CEBPZQ03701 1054 aaKnown RBP15.14■□□□□ 0.01
LINC00339-211ENST00000641009 ZC2HC1CQ53FD0 456 aaPredicted RBP15.14■□□□□ 0.01
LINC00339-211ENST00000641009 ZNF280DQ6N043 979 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 MTSS1LQ765P7 747 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 CCDC105Q8IYK2 499 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 APPL2Q8NEU8 664 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 FAM212AQ96EL1 285 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 CLIC6Q96NY7 704 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 RPF1Q9H9Y2 349 aaKnown RBP15.14■□□□□ 0.01
LINC00339-211ENST00000641009 ARHGEF3Q9NR81 526 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 FBXO2Q9UK22 296 aaPredicted RBP15.14■□□□□ 0.01
LINC00339-211ENST00000641009 UBQLN1Q9UMX0 589 aaKnown RBP15.14■□□□□ 0.01
LINC00339-211ENST00000641009 TIMM13Q9Y5L4 95 aaPredicted RBP15.14■□□□□ 0.01
LINC00339-211ENST00000641009 TICRRQ7Z2Z1 1910 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 SPTBN4Q9H254 2564 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 FANCMQ8IYD8 2048 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 PTPRZ1P23471 2315 aaPredicted RBP15.14■□□□□ 0.01
LINC00339-211ENST00000641009 TISP43B9A030 160 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 ANKRD63C9JTQ0 380 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 GFRA3O60609 400 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 PTPN2P17706 415 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 SCP2P22307 547 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 GTF2BQ00403 316 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 ADCY1Q08828 1119 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 KYAT1Q16773 422 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 POTEHQ6S545 545 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 DYMQ7RTS9 669 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 MAP4K3Q8IVH8 894 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 TCEAL8Q8IYN2 117 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 DTWD2Q8NBA8 298 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 MCRS1Q96EZ8 462 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 KXD1Q9BQD3 176 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 CORO1BQ9BR76 489 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 IKZF4Q9H2S9 585 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 SRPRBQ9Y5M8 271 aaKnown RBP15.14■□□□□ 0.01
LINC00339-211ENST00000641009 INSL5Q9Y5Q6 135 aa15.14■□□□□ 0.01
LINC00339-211ENST00000641009 M0QZQ0 153 aa15.13■□□□□ 0.01
LINC00339-211ENST00000641009 PPEF2O14830 753 aa15.13■□□□□ 0.01
LINC00339-211ENST00000641009 CPB1P15086 417 aa15.13■□□□□ 0.01
LINC00339-211ENST00000641009 CEBPBP17676 345 aa15.13■□□□□ 0.01
LINC00339-211ENST00000641009 CYP3A5P20815 502 aa15.13■□□□□ 0.01
LINC00339-211ENST00000641009 YWHAHQ04917 246 aaPredicted RBP15.13■□□□□ 0.01
LINC00339-211ENST00000641009 TPGS2Q68CL5 300 aa15.13■□□□□ 0.01
LINC00339-211ENST00000641009 JADE1Q6IE81 842 aa15.13■□□□□ 0.01
LINC00339-211ENST00000641009 RNF19BQ6ZMZ0 732 aa15.13■□□□□ 0.01
LINC00339-211ENST00000641009 KRI1Q8N9T8 703 aaKnown RBP15.13■□□□□ 0.01
LINC00339-211ENST00000641009 TCEAL4Q96EI5 215 aa15.13■□□□□ 0.01
LINC00339-211ENST00000641009 CPSF3Q9UKF6 684 aaKnown RBP15.13■□□□□ 0.01
LINC00339-211ENST00000641009 ZNF292O60281 2723 aa15.13■□□□□ 0.01
LINC00339-211ENST00000641009 NRG2O14511 850 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-211ENST00000641009 XPOTO43592 962 aaKnown RBP15.12■□□□□ 0.01
LINC00339-211ENST00000641009 ADRB2P07550 413 aa15.12■□□□□ 0.01
LINC00339-211ENST00000641009 DCNP07585 359 aaKnown RBP15.12■□□□□ 0.01
LINC00339-211ENST00000641009 OR4Q2P0C623 313 aa15.12■□□□□ 0.01
LINC00339-211ENST00000641009 NBL1P41271 181 aa15.12■□□□□ 0.01
LINC00339-211ENST00000641009 AARSP49588 968 aaKnown RBP eCLIP15.12■□□□□ 0.01
LINC00339-211ENST00000641009 ACOT2P49753 483 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms