RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 LOXL4Q96JB6 756 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 PRIMPOLQ96LW4 560 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 FAM20AQ96MK3 541 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 ZFP42Q96MM3 310 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 NAP1L4Q99733 375 aaKnown RBP6.9□□□□□ -1.3
PRKCH-228ENST00000640011 KXD1Q9BQD3 176 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 CLSTN3Q9BQT9 956 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 SH2D3AQ9BRG2 576 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 TRMT61BQ9BVS5 477 aaKnown RBP6.9□□□□□ -1.3
PRKCH-228ENST00000640011 KLF16Q9BXK1 252 aaPredicted RBP6.9□□□□□ -1.3
PRKCH-228ENST00000640011 EIF2AQ9BY44 585 aaKnown RBP6.9□□□□□ -1.3
PRKCH-228ENST00000640011 BRD9Q9H8M2 597 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 MINDY3Q9H8M7 445 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 ZFP14Q9HCL3 533 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 HEBP1Q9NRV9 189 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 BRPF3Q9ULD4 1205 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 NAP1L2Q9ULW6 460 aaPredicted RBP6.9□□□□□ -1.3
PRKCH-228ENST00000640011 GPR179Q6PRD1 2367 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 TMEM150BA6NC51 233 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 INO80B-WBP1J3KQ70 363 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 DGAT1O75907 488 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 LRG1P02750 347 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 THP07101 528 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 PROS1P07225 676 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 RHOP08100 348 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 PTPN2P17706 415 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 PSMC3P17980 439 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 HOXA6P31267 233 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 YWHABP31946 246 aaKnown RBP6.89□□□□□ -1.31
PRKCH-228ENST00000640011 ELF1P32519 619 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 NPEPPSP55786 919 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 NLRP5P59047 1200 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 NTHL1P78549 312 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 FZD5Q13467 585 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 COL9A3Q14050 684 aaPredicted RBP6.89□□□□□ -1.31
PRKCH-228ENST00000640011 EMC2Q15006 297 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 ACAP1Q15027 740 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 AASDHQ4L235 1098 aaPredicted RBP6.89□□□□□ -1.31
PRKCH-228ENST00000640011 FAM171A1Q5VUB5 890 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 PLA2G4FQ68DD2 849 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 PPP4R3AQ6IN85 833 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 PRSS55Q6UWB4 352 aaPredicted RBP6.89□□□□□ -1.31
PRKCH-228ENST00000640011 ANKS3Q6ZW76 656 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 TRIM22Q8IYM9 498 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 ELMOD1Q8N336 334 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 FBXL16Q8N461 479 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 SPEM1Q8N4L4 309 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 LEMD2Q8NC56 503 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 GSTCDQ8NEC7 633 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 ITFG1Q8TB96 612 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 TMEM143Q96AN5 459 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 B3GALT6Q96L58 329 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 ESYT1Q9BSJ8 1104 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 APOL6Q9BWW8 343 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 GPR88Q9GZN0 384 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 SLKQ9H2G2 1235 aaPredicted RBP6.89□□□□□ -1.31
PRKCH-228ENST00000640011 ZSWIM4Q9H7M6 989 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 LMAN1LQ9HAT1 526 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 SH2B1Q9NRF2 756 aaPredicted RBP6.89□□□□□ -1.31
PRKCH-228ENST00000640011 DNMT3BQ9UBC3 853 aaKnown RBP6.89□□□□□ -1.31
PRKCH-228ENST00000640011 PARP2Q9UGN5 583 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 DDX25Q9UHL0 483 aaKnown RBP6.89□□□□□ -1.31
PRKCH-228ENST00000640011 NDRG2Q9UN36 371 aaKnown RBP6.89□□□□□ -1.31
PRKCH-228ENST00000640011 HES2Q9Y543 173 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 NID2Q14112 1375 aa6.89□□□□□ -1.31
PRKCH-228ENST00000640011 CACNA1IQ9P0X4 2223 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 A0A1B0GUA9 196 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 TMEM8BA6NDV4 472 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 TMEM229AB2RXF0 380 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 F8W810 466 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 TMEM189-UBE2V1I3L0A0 370 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 TBX3O15119 743 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 MARCH6O60337 910 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 GCFC2P16383 781 aaKnown RBP6.88□□□□□ -1.31
PRKCH-228ENST00000640011 IFNAR1P17181 557 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 ARF4P18085 180 aaPredicted RBP6.88□□□□□ -1.31
PRKCH-228ENST00000640011 AKAP5P24588 427 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 OR1D2P34982 312 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 RBM25P49756 843 aaKnown RBP6.88□□□□□ -1.31
PRKCH-228ENST00000640011 MBTD1Q05BQ5 628 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 CBLBQ13191 982 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 EPHA7Q15375 998 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 LPAL2Q16609 132 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 CYP4A22Q5TCH4 519 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 IQCEQ6IPM2 695 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 CEP68Q76N32 757 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 SYNPOQ8N3V7 929 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 KDF1Q8NAX2 398 aaPredicted RBP6.88□□□□□ -1.31
PRKCH-228ENST00000640011 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.88□□□□□ -1.31
PRKCH-228ENST00000640011 ST13P5Q8NFI4 369 aaPredicted RBP6.88□□□□□ -1.31
PRKCH-228ENST00000640011 CSGALNACT1Q8TDX6 532 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 MCRS1Q96EZ8 462 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 CPB2Q96IY4 423 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 UROC1Q96N76 676 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 ADPGKQ9BRR6 497 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 LXNQ9BS40 222 aa6.88□□□□□ -1.31
PRKCH-228ENST00000640011 NXF3Q9H4D5 531 aaKnown RBP6.88□□□□□ -1.31
PRKCH-228ENST00000640011 C8orf33Q9H7E9 229 aaPredicted RBP6.88□□□□□ -1.31
PRKCH-228ENST00000640011 ZNF334Q9HCZ1 680 aaPredicted RBP6.88□□□□□ -1.31
PRKCH-228ENST00000640011 PRMT7Q9NVM4 692 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms