RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 ESRRBO95718 433 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 PYGMP11217 842 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 PAMP19021 973 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 C12orf60Q5U649 245 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 PHLDB3Q6NSJ2 640 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 C3orf33Q6P1S2 294 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CCDC149Q6ZUS6 474 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 TMTC3Q6ZXV5 915 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CHD1LQ86WJ1 897 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 BBS7Q8IWZ6 715 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 LRRC71Q8N4P6 559 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 GALNT11Q8NCW6 608 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 PTPRN2Q92932 1015 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 RNF25Q96BH1 459 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 LIN28AQ9H9Z2 209 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CNOT6Q9ULM6 557 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 OR5K4A6NMS3 321 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 KERAO60938 352 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 DNTTP04053 509 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 NDUFV2P19404 249 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 DIO1P49895 249 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 EEF1A1P68104 462 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 EEF1A2Q05639 463 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 FSCBQ5H9T9 825 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 EEF1A1P5Q5VTE0 462 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 HEATR4Q86WZ0 1026 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 TICAM1Q8IUC6 712 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 TTC5Q8N0Z6 440 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 TCAIMQ8N3R3 496 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 EXD1Q8NHP7 514 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 PANK1Q8TE04 598 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 PTCD2Q8WV60 388 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 KCTD4Q8WVF5 259 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 SLC47A1Q96FL8 570 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 L3MBTL3Q96JM7 780 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 TRIM2Q9C040 744 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 DNAJC17Q9NVM6 304 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 SYBUQ9NX95 663 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 TMOD3Q9NYL9 352 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 PLAAQ9Y263 795 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 ZNF175Q9Y473 711 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 ABCA5Q8WWZ7 1642 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CCDC88BA6NC98 1476 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 UACAQ9BZF9 1416 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 PDE4DIPQ5VU43 2346 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 LOC100653049A0A140TA62 436 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CIDEAO60543 219 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 TSPAN3O60637 253 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 KRT34O76011 436 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 FGF18O76093 207 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CALB1P05937 261 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 NAGAP17050 411 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 ALOX12P18054 663 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 ALAS2P22557 587 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CIITAP33076 1130 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 BMI1P35226 326 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 YARSP54577 528 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 ATP8B2P98198 1209 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 PURAQ00577 322 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CUL4AQ13619 759 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 MLC1Q15049 377 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 RAB12Q6IQ22 244 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 UNC13DQ70J99 1090 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 LRRC39Q96DD0 335 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 ZDHHC12Q96GR4 267 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 BTBD2Q9BX70 525 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CCDC86Q9H6F5 360 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 MOV10Q9HCE1 1003 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 KBTBD4Q9NVX7 518 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 ZRANB1Q9UGI0 708 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 ERVK-19Q9WJR5 959 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 ACOD1A6NK06 481 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 MIF4GDA9UHW6 222 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 H7C0C1 242 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 GLI1P08151 1106 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CHN1P15882 459 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 KELP23276 732 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 GNG2P59768 71 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 KIF23Q02241 960 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 FKBP4Q02790 459 aaKnown RBP eCLIP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 SMU1Q2TAY7 513 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 C20orf194Q5TEA3 1177 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 NFRKBQ6P4R8 1299 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 RUFY4Q6ZNE9 571 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 FAM196AQ6ZSG2 479 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 RNASE11Q8TAA1 199 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 ZBTB40Q9NUA8 1239 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 LMBRD1Q9NUN5 540 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 RRN3Q9NYV6 651 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 TRPS1Q9UHF7 1281 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 DIDO1Q9BTC0 2240 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 FAM221BA6H8Z2 402 aa4.53□□□□□ -1.69
SCN3A-209ENST00000639244 KRT15P19012 456 aa4.53□□□□□ -1.69
SCN3A-209ENST00000639244 FGFR2P21802 821 aa4.53□□□□□ -1.69
SCN3A-209ENST00000639244 RNASE9P60153 205 aaKnown RBP4.53□□□□□ -1.69
SCN3A-209ENST00000639244 CAPRIN1Q14444 709 aaKnown RBP4.53□□□□□ -1.69
SCN3A-209ENST00000639244 GPR162Q16538 588 aa4.53□□□□□ -1.69
SCN3A-209ENST00000639244 KCNT1Q5JUK3 1230 aa4.53□□□□□ -1.69
SCN3A-209ENST00000639244 TNFRSF25Q93038 417 aa4.53□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms