RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 TMEM173Q86WV6 379 aaPredicted RBP24.15■■□□□ 1.46
CHRNA7-231ENST00000637786 DHX40Q8IX18 779 aaKnown RBP24.15■■□□□ 1.46
CHRNA7-231ENST00000637786 LRRC52Q8N7C0 313 aa24.15■■□□□ 1.46
CHRNA7-231ENST00000637786 FANCLQ9NW38 375 aa24.15■■□□□ 1.46
CHRNA7-231ENST00000637786 SIX4Q9UIU6 781 aa24.15■■□□□ 1.46
CHRNA7-231ENST00000637786 LZTS1Q9Y250 596 aa24.15■■□□□ 1.46
CHRNA7-231ENST00000637786 PLXNA4Q9HCM2 1894 aa24.15■■□□□ 1.46
CHRNA7-231ENST00000637786 NT5C1B-RDH14C9J2C7 533 aa24.14■■□□□ 1.45
CHRNA7-231ENST00000637786 H3BNC9 293 aa24.14■■□□□ 1.45
CHRNA7-231ENST00000637786 PMM2O15305 246 aa24.14■■□□□ 1.45
CHRNA7-231ENST00000637786 EFEMP2O95967 443 aa24.14■■□□□ 1.45
CHRNA7-231ENST00000637786 KRT17Q04695 432 aa24.14■■□□□ 1.45
CHRNA7-231ENST00000637786 UBE3AQ05086 875 aa24.14■■□□□ 1.45
CHRNA7-231ENST00000637786 C3orf58Q8NDZ4 430 aa24.14■■□□□ 1.45
CHRNA7-231ENST00000637786 FAM200AQ8TCP9 573 aa24.14■■□□□ 1.45
CHRNA7-231ENST00000637786 FAM84AQ96KN4 292 aa24.14■■□□□ 1.45
CHRNA7-231ENST00000637786 ZNF560Q96MR9 790 aa24.14■■□□□ 1.45
CHRNA7-231ENST00000637786 CBX8Q9HC52 389 aa24.14■■□□□ 1.45
CHRNA7-231ENST00000637786 MTUS1Q9ULD2 1270 aa24.14■■□□□ 1.45
CHRNA7-231ENST00000637786 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.14■■□□□ 1.45
CHRNA7-231ENST00000637786 BECN2A8MW95 431 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 KCNJ18B7U540 433 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 TRAPPC3O43617 180 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 N4BP1O75113 896 aaKnown RBP24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 TADA2AO75478 443 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 ITGB1P05556 798 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 ZNF18P17022 549 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 POLR2BP30876 1174 aaKnown RBP24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 GCLMP48507 274 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 AARSP49588 968 aaKnown RBP eCLIP24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 MXI1P50539 228 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 ELAVL2Q12926 359 aaKnown RBP24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 BIRC3Q13489 604 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 KCNJ12Q14500 433 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 TCP11X2Q5H9J9 407 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 KRT39Q6A163 491 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 CD300LGQ6UXG3 332 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 DDX53Q86TM3 631 aaKnown RBP24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 BCL7CQ8WUZ0 217 aaPredicted RBP24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 ARNTL2Q8WYA1 636 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 RABGGTAQ92696 567 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 LRCH3Q96II8 777 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 AGAP1Q9UPQ3 857 aa24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 R3HCC1Q9Y3T6 440 aaKnown RBP24.13■■□□□ 1.45
CHRNA7-231ENST00000637786 SF3B1O75533 1304 aaKnown RBP eCLIP24.12■■□□□ 1.45
CHRNA7-231ENST00000637786 PHACTR2O75167 634 aa24.12■■□□□ 1.45
CHRNA7-231ENST00000637786 PRKCSHP14314 528 aaPredicted RBP24.12■■□□□ 1.45
CHRNA7-231ENST00000637786 MTIF2P46199 727 aaKnown RBP24.12■■□□□ 1.45
CHRNA7-231ENST00000637786 LILRA4P59901 499 aa24.12■■□□□ 1.45
CHRNA7-231ENST00000637786 ZNF697Q5TEC3 545 aa24.12■■□□□ 1.45
CHRNA7-231ENST00000637786 RNF168Q8IYW5 571 aaPredicted RBP24.12■■□□□ 1.45
CHRNA7-231ENST00000637786 TMEM130Q8N3G9 435 aa24.12■■□□□ 1.45
CHRNA7-231ENST00000637786 HSD3B7Q9H2F3 369 aa24.12■■□□□ 1.45
CHRNA7-231ENST00000637786 PUF60Q9UHX1 559 aaKnown RBP24.12■■□□□ 1.45
CHRNA7-231ENST00000637786 NUB1Q9Y5A7 615 aa24.12■■□□□ 1.45
CHRNA7-231ENST00000637786 F8W810 466 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 PPEF2O14830 753 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 P4HA2O15460 535 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 STAU1O95793 577 aaKnown RBP24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 KRT19P08727 400 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 FMO5P49326 533 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 TAF6P49848 677 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 KCNH2Q12809 1159 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 MYO1EQ12965 1108 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 GPM6BQ13491 265 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 TRPC3Q13507 836 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 NCOA4Q13772 614 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 MAN2A1Q16706 1144 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 SV2CQ496J9 727 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 FUT10Q6P4F1 479 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 CREBRFQ8IUR6 639 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 SPPL3Q8TCT6 385 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 TUBGCP2Q9BSJ2 902 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 LMAN2LQ9H0V9 348 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 TTYH1Q9H313 450 aaPredicted RBP24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 CERS4Q9HA82 394 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 COQ4Q9Y3A0 265 aa24.11■■□□□ 1.45
CHRNA7-231ENST00000637786 CST3P01034 146 aaPredicted RBP24.1■■□□□ 1.45
CHRNA7-231ENST00000637786 AFPP02771 609 aaKnown RBP24.1■■□□□ 1.45
CHRNA7-231ENST00000637786 ATICP31939 592 aa24.1■■□□□ 1.45
CHRNA7-231ENST00000637786 HSP90AA4PQ58FG1 418 aa24.1■■□□□ 1.45
CHRNA7-231ENST00000637786 ANKRD20A12PQ8NF67 263 aa24.1■■□□□ 1.45
CHRNA7-231ENST00000637786 HASPINQ8TF76 798 aa24.1■■□□□ 1.45
CHRNA7-231ENST00000637786 TAF4BQ92750 862 aa24.1■■□□□ 1.45
CHRNA7-231ENST00000637786 SUSD3Q96L08 255 aa24.1■■□□□ 1.45
CHRNA7-231ENST00000637786 VRTNQ9H8Y1 702 aa24.1■■□□□ 1.45
CHRNA7-231ENST00000637786 COL4A4P53420 1690 aaPredicted RBP24.1■■□□□ 1.45
CHRNA7-231ENST00000637786 TRANK1O15050 2925 aa24.09■■□□□ 1.45
CHRNA7-231ENST00000637786 ARHGEF37A1IGU5 675 aa24.09■■□□□ 1.45
CHRNA7-231ENST00000637786 M0QZQ0 153 aa24.09■■□□□ 1.45
CHRNA7-231ENST00000637786 VNN1O95497 513 aa24.09■■□□□ 1.45
CHRNA7-231ENST00000637786 SOD2P04179 222 aa24.09■■□□□ 1.45
CHRNA7-231ENST00000637786 IGFBP6P24592 240 aaPredicted RBP24.09■■□□□ 1.45
CHRNA7-231ENST00000637786 TPM4P67936 248 aa24.09■■□□□ 1.45
CHRNA7-231ENST00000637786 CBWD6Q4V339 395 aa24.09■■□□□ 1.45
CHRNA7-231ENST00000637786 CBWD3Q5JTY5 395 aa24.09■■□□□ 1.45
CHRNA7-231ENST00000637786 CBWD5Q5RIA9 395 aa24.09■■□□□ 1.45
CHRNA7-231ENST00000637786 LUZP1Q86V48 1076 aa24.09■■□□□ 1.45
CHRNA7-231ENST00000637786 GPR65Q8IYL9 337 aa24.09■■□□□ 1.45
CHRNA7-231ENST00000637786 FBXL13Q8NEE6 735 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms