RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 CLSTN1O94985 981 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 SKIP12755 728 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 CASP14P31944 242 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 GTF2H1P32780 548 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 ADKP55263 362 aaKnown RBP11.48□□□□□ -0.57
CLN5-213ENST00000636681 TBX2Q13207 712 aaPredicted RBP11.48□□□□□ -0.57
CLN5-213ENST00000636681 KLHDC7AQ5VTJ3 777 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 C9orf57Q5W0N0 161 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 IQCEQ6IPM2 695 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 GLB1LQ6UWU2 654 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 CD300LGQ6UXG3 332 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 NPAS4Q8IUM7 802 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 CD302Q8IX05 232 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 HACE1Q8IYU2 909 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 KREMEN1Q96MU8 473 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 SDCBP2Q9H190 292 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 ELAC1Q9H777 363 aaKnown RBP11.48□□□□□ -0.57
CLN5-213ENST00000636681 NRDE2Q9H7Z3 1164 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 PLXNA4Q9HCM2 1894 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 UBQLN1Q9UMX0 589 aaKnown RBP11.48□□□□□ -0.57
CLN5-213ENST00000636681 A0A1W2PQC6 194 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 FAM170AA1A519 330 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 ANO9A1A5B4 782 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 GTPBP10A4D1E9 387 aaKnown RBP11.47□□□□□ -0.57
CLN5-213ENST00000636681 LCHNA4D1U4 455 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 H0YGN5 161 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 HCRTO43612 131 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 DGKIO75912 1065 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 RABGGTBP53611 331 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 CDH8P55286 799 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 POLR2FP61218 127 aaKnown RBP11.47□□□□□ -0.57
CLN5-213ENST00000636681 POU5F1Q01860 360 aaKnown RBP11.47□□□□□ -0.57
CLN5-213ENST00000636681 SHHQ15465 462 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 ARHGAP44Q17R89 818 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 SPECC1LQ69YQ0 1117 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 TMEM173Q86WV6 379 aaPredicted RBP11.47□□□□□ -0.57
CLN5-213ENST00000636681 BEST2Q8NFU1 509 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 CACTINQ8WUQ7 758 aaKnown RBP11.47□□□□□ -0.57
CLN5-213ENST00000636681 PDLIM2Q96JY6 352 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 LBHD1Q9BQE6 289 aaPredicted RBP11.47□□□□□ -0.57
CLN5-213ENST00000636681 RC3H2Q9HBD1 1191 aaKnown RBP11.47□□□□□ -0.57
CLN5-213ENST00000636681 UBE2TQ9NPD8 197 aaPredicted RBP11.47□□□□□ -0.57
CLN5-213ENST00000636681 ACP6Q9NPH0 428 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 NXF1Q9UBU9 619 aaKnown RBP11.47□□□□□ -0.57
CLN5-213ENST00000636681 MYO9BQ13459 2157 aa11.47□□□□□ -0.57
CLN5-213ENST00000636681 PIRO00625 290 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 INPPL1O15357 1258 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 STX10O60499 249 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 ZC3H11AO75152 810 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLN5-213ENST00000636681 ARHGEF15O94989 841 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 ASS1P00966 412 aaKnown RBP11.46□□□□□ -0.57
CLN5-213ENST00000636681 AMHP03971 560 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 MYOGP15173 224 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 CDC25BP30305 580 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 BRCC3P46736 316 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 BCAR1P56945 870 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 NOP14P78316 857 aaKnown RBP11.46□□□□□ -0.57
CLN5-213ENST00000636681 RNASELQ05823 741 aaKnown RBP11.46□□□□□ -0.57
CLN5-213ENST00000636681 ENPEPQ07075 957 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 ORC1Q13415 861 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 TRPC3Q13507 836 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 USP37Q86T82 979 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 COLGALT2Q8IYK4 626 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 PPM1KQ8N3J5 372 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 NEK11Q8NG66 645 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 BCL7CQ8WUZ0 217 aaPredicted RBP11.46□□□□□ -0.57
CLN5-213ENST00000636681 BAP1Q92560 729 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 HPDLQ96IR7 371 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 GPR88Q9GZN0 384 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 SMYD3Q9H7B4 428 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 DNAJC12Q9UKB3 198 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 PRG3Q9Y2Y8 225 aaPredicted RBP11.46□□□□□ -0.57
CLN5-213ENST00000636681 DERAQ9Y315 318 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 NME7Q9Y5B8 376 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 MYO7AQ13402 2215 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 MYH10P35580 1976 aa11.46□□□□□ -0.57
CLN5-213ENST00000636681 PODXLO00592 558 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 PMM2O15305 246 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 N4BP1O75113 896 aaKnown RBP11.46□□□□□ -0.58
CLN5-213ENST00000636681 KIF4AO95239 1232 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 PFKMP08237 780 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 WEE2P0C1S8 567 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 UCHL3P15374 230 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 TRIM21P19474 475 aaKnown RBP11.46□□□□□ -0.58
CLN5-213ENST00000636681 KCNJ6P48051 423 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 DSC1Q08554 894 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 GRIK3Q13003 919 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 RAPGEF1Q13905 1077 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 UPP1Q16831 310 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 ZNF699Q32M78 642 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 WDR72Q3MJ13 1102 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 CCDC186Q7Z3E2 898 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 ABI1Q8IZP0 508 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 HERVK_113Q902F9 699 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 ZNF689Q96CS4 500 aaPredicted RBP11.46□□□□□ -0.58
CLN5-213ENST00000636681 LPIN3Q9BQK8 851 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 NAA15Q9BXJ9 866 aaKnown RBP11.46□□□□□ -0.58
CLN5-213ENST00000636681 CWH43Q9H720 699 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 APEX2Q9UBZ4 518 aa11.46□□□□□ -0.58
CLN5-213ENST00000636681 ITGA11Q9UKX5 1188 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms