RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 OR1D2P34982 312 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 GUCY2FP51841 1108 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 NDUFA8P51970 172 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 VARS2Q5ST30 1063 aaKnown RBP17.02■□□□□ 0.31
LINC00339-207ENST00000634712 LIN9Q5TKA1 542 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 LILRA6Q6PI73 481 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 CRELD2Q6UXH1 353 aaPredicted RBP17.02■□□□□ 0.31
LINC00339-207ENST00000634712 DSTYKQ6XUX3 929 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 C15orf39Q6ZRI6 1047 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 GPR149Q86SP6 731 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 GLIS3Q8NEA6 775 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 ZNF507Q8TCN5 953 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 CCDC47Q96A33 483 aaKnown RBP17.02■□□□□ 0.31
LINC00339-207ENST00000634712 CCDC34Q96HJ3 373 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 SUSD3Q96L08 255 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 CBWD1Q9BRT8 395 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 PIDD1Q9HB75 910 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 SLC39A2Q9NP94 309 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 EXOC1Q9NV70 894 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 MTRRQ9UBK8 725 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 CDH22Q9UJ99 828 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 C2CD2Q9Y426 696 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 BACE2Q9Y5Z0 518 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 CDY1Q9Y6F8 540 aa17.02■□□□□ 0.31
LINC00339-207ENST00000634712 UBE4BO95155 1302 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 GOLGA8IPA6NC78 632 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 GOLGA8JA6NMD2 632 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 LOC730098B7Z3J9 87 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 MYL1P05976 194 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 NFICP08651 508 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 ALADP13716 330 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 SP100P23497 879 aaPredicted RBP17.01■□□□□ 0.31
LINC00339-207ENST00000634712 PAX3P23760 479 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 RAB33AQ14088 237 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 CYP26C1Q6V0L0 522 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 NT5DC4Q86YG4 428 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 NELFCDQ8IXH7 590 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 GPD1LQ8N335 351 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 CMASQ8NFW8 434 aaPredicted RBP17.01■□□□□ 0.31
LINC00339-207ENST00000634712 CACTINQ8WUQ7 758 aaKnown RBP17.01■□□□□ 0.31
LINC00339-207ENST00000634712 POMKQ9H5K3 350 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 DPP3Q9NY33 737 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 RBAKQ9NYW8 714 aaPredicted RBP17.01■□□□□ 0.31
LINC00339-207ENST00000634712 PCDHB8Q9UN66 801 aa17.01■□□□□ 0.31
LINC00339-207ENST00000634712 PDCD11Q14690 1871 aaKnown RBP17.01■□□□□ 0.31
LINC00339-207ENST00000634712 MUC3AQ02505 3323 aa17■□□□□ 0.31
LINC00339-207ENST00000634712 FAM237AA0A1B0GTK4 181 aa17■□□□□ 0.31
LINC00339-207ENST00000634712 RFPL2O75678 378 aa17■□□□□ 0.31
LINC00339-207ENST00000634712 ARPP19P56211 112 aa17■□□□□ 0.31
LINC00339-207ENST00000634712 PSMD2Q13200 908 aa17■□□□□ 0.31
LINC00339-207ENST00000634712 CTXN3Q4LDR2 81 aa17■□□□□ 0.31
LINC00339-207ENST00000634712 EPM2AIP1Q7L775 607 aaPredicted RBP17■□□□□ 0.31
LINC00339-207ENST00000634712 HS2ST1Q7LGA3 356 aa17■□□□□ 0.31
LINC00339-207ENST00000634712 USP37Q86T82 979 aa17■□□□□ 0.31
LINC00339-207ENST00000634712 RNF135Q8IUD6 432 aa17■□□□□ 0.31
LINC00339-207ENST00000634712 SMG7Q92540 1137 aaKnown RBP17■□□□□ 0.31
LINC00339-207ENST00000634712 ZDHHC7Q9NXF8 308 aa17■□□□□ 0.31
LINC00339-207ENST00000634712 ARHGEF37A1IGU5 675 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 ZNF233A6NK53 670 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 PI4K2BG5E9Z4 385 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 ADAM12O43184 909 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 ELF1P32519 619 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 SNRPFP62306 86 aaKnown RBP16.99■□□□□ 0.31
LINC00339-207ENST00000634712 TFAMQ00059 246 aaKnown RBP16.99■□□□□ 0.31
LINC00339-207ENST00000634712 EHHADHQ08426 723 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 PPM1LQ5SGD2 360 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 C9orf57Q5W0N0 161 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 ZNF280DQ6N043 979 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 CCDC149Q6ZUS6 474 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 BRSK2Q8IWQ3 736 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 TMEM130Q8N3G9 435 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 ZSWIM2Q8NEG5 633 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 SCFD1Q8WVM8 642 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 C1QTNF1Q9BXJ1 281 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 EPHX3Q9H6B9 360 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 KIAA1586Q9HCI6 787 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 FBXW11Q9UKB1 542 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 R3HCC1Q9Y3T6 440 aaKnown RBP16.99■□□□□ 0.31
LINC00339-207ENST00000634712 PLXNA3P51805 1871 aa16.99■□□□□ 0.31
LINC00339-207ENST00000634712 VWA8A3KMH1 1905 aa16.98■□□□□ 0.31
LINC00339-207ENST00000634712 M0QZQ0 153 aa16.98■□□□□ 0.31
LINC00339-207ENST00000634712 DCXO43602 365 aa16.98■□□□□ 0.31
LINC00339-207ENST00000634712 ZMYND10O75800 440 aa16.98■□□□□ 0.31
LINC00339-207ENST00000634712 ZNF202O95125 648 aa16.98■□□□□ 0.31
LINC00339-207ENST00000634712 LILRA4P59901 499 aa16.98■□□□□ 0.31
LINC00339-207ENST00000634712 YWHAHQ04917 246 aaPredicted RBP16.98■□□□□ 0.31
LINC00339-207ENST00000634712 UVSSAQ2YD98 709 aa16.98■□□□□ 0.31
LINC00339-207ENST00000634712 KMT5BQ4FZB7 885 aa16.98■□□□□ 0.31
LINC00339-207ENST00000634712 RSPO2Q6UXX9 243 aaPredicted RBP16.98■□□□□ 0.31
LINC00339-207ENST00000634712 KRBA2Q6ZNG9 492 aa16.98■□□□□ 0.31
LINC00339-207ENST00000634712 KHSRPQ92945 711 aaKnown RBP eCLIP16.98■□□□□ 0.31
LINC00339-207ENST00000634712 ACSF2Q96CM8 615 aaPredicted RBP16.98■□□□□ 0.31
LINC00339-207ENST00000634712 PRKD2Q9BZL6 878 aa16.98■□□□□ 0.31
LINC00339-207ENST00000634712 HSPBP1Q9NZL4 362 aa16.98■□□□□ 0.31
LINC00339-207ENST00000634712 CGNQ9P2M7 1197 aaKnown RBP16.98■□□□□ 0.31
LINC00339-207ENST00000634712 MTCL1Q9Y4B5 1905 aaKnown RBP16.98■□□□□ 0.31
LINC00339-207ENST00000634712 PIRO00625 290 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 CLIC2O15247 247 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 KLRC4O43908 158 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 RPN1P04843 607 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms