RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 HASPINQ8TF76 798 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 ARMC5Q96C12 935 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 PAK6Q9NQU5 681 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 FAM105AQ9NUU6 356 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 SNX9Q9Y5X1 595 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 CASTOR2A6NHX0 329 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 DESP17661 470 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 TMEM169Q96HH4 297 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 MINDY3Q9H8M7 445 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 ARHGAP28Q9P2N2 729 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 SLC4A7Q9Y6M7 1214 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 SRGAP2O75044 1071 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 MLH1P40692 756 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 NOP2P46087 812 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 FPGSQ05932 587 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 MAPK7Q13164 816 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 NXF3Q9H4D5 531 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 AKAP3O75969 853 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 PARNO95453 639 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 MFAP3P55082 362 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 SMC1AQ14683 1233 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 WDR93Q6P2C0 686 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 FBXL13Q8NEE6 735 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 ZNF560Q96MR9 790 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 MTMR12Q9C0I1 747 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 UBQLN1Q9UMX0 589 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 BZW2Q9Y6E2 419 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 ITGB3P05106 788 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 RBP5P82980 135 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 MBTD1Q05BQ5 628 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 GLYCTKQ8IVS8 523 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 TRIM58Q8NG06 486 aa13.34□□□□□ -0.27
SYNGAP1-207ENST00000628646 SLC16A3O15427 465 aaKnown RBP13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 CSF2RAP15509 400 aa13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 TNFAIP3P21580 790 aa13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 STAT1P42224 750 aa13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 SCNN1GP51170 649 aa13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 VAV2P52735 878 aa13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 ZNF131P52739 623 aa13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 KLHL30Q0D2K2 578 aa13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 NCOA4Q13772 614 aa13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 ZNF771Q7L3S4 317 aaPredicted RBP13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 EPM2AIP1Q7L775 607 aaPredicted RBP13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 ZNF572Q7Z3I7 529 aaPredicted RBP13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 HELQQ8TDG4 1101 aa13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 UBE2OQ9C0C9 1292 aaKnown RBP13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 CAPN6Q9Y6Q1 641 aa13.33□□□□□ -0.27
SYNGAP1-207ENST00000628646 RBAK-RBAKDNI3L0D1 243 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 TRAPPC3O43617 180 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 TSPAN1O60635 241 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 CD4P01730 458 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 POLR2BP30876 1174 aaKnown RBP13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 PCBP1Q15365 356 aaKnown RBP eCLIP13.33□□□□□ -0.281e-6■■■■□ 22.8
SYNGAP1-207ENST00000628646 FBXO47Q5MNV8 452 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 NOX5Q96PH1 765 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 ABCB6Q9NP58 842 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 C2CD2LO14523 706 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 TAF3Q5VWG9 929 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 FAM228AQ86W67 206 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 TRIM59Q8IWR1 403 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 MKNK1Q9BUB5 465 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 DPP3Q9NY33 737 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 HESX1Q9UBX0 185 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 LRRC53A6NM62 1247 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 TNNT3P45378 269 aaPredicted RBP13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 AP3M2P53677 418 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 SLC24A5Q71RS6 500 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 SELENOOQ9BVL4 669 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 AAASQ9NRG9 546 aa13.33□□□□□ -0.28
SYNGAP1-207ENST00000628646 TMCO5BA8MYB1 307 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 ELF1P32519 619 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 TNFSF9P41273 254 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 RNPC3Q96LT9 517 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 EIF2AQ9BY44 585 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 ADGRA3Q8IWK6 1321 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 LACTBL1A8MY62 500 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 ZNF185O15231 689 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 PJA2O43164 708 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 FAM193AP78312 1265 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 APBA1Q02410 837 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 COL13A1Q5TAT6 717 aaPredicted RBP13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 CREG2Q8IUH2 290 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 PI4K2AQ9BTU6 479 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 UBN1Q9NPG3 1134 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 CHST12Q9NRB3 414 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 IPPQ9Y573 584 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 HAS3O00219 553 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 BCAR1P56945 870 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 CYP24A1Q07973 514 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 PDXDC1Q6P996 788 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 TRAF3IP3Q9Y228 551 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 SAR1BQ9Y6B6 198 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 PTPRFP10586 1907 aa13.32□□□□□ -0.28
SYNGAP1-207ENST00000628646 ZNFX1Q9P2E3 1918 aaKnown RBP13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 ANO9A1A5B4 782 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 TLL1O43897 1013 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 HLA-DRAP01903 254 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 ALDH2P05091 517 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 FMO5P49326 533 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms