RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 TSPAN18Q96SJ8 248 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 MSTO1Q9BUK6 570 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 ZSCAN16Q9H4T2 348 aaPredicted RBP13.18□□□□□ -0.3
UBR1-212ENST00000627960 RPF1Q9H9Y2 349 aaKnown RBP13.18□□□□□ -0.3
UBR1-212ENST00000627960 HCFC1R1Q9NWW0 138 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 DNMT3BQ9UBC3 853 aaKnown RBP13.18□□□□□ -0.3
UBR1-212ENST00000627960 WNT16Q9UBV4 365 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 CPSF3Q9UKF6 684 aaKnown RBP13.18□□□□□ -0.3
UBR1-212ENST00000627960 FBXL21Q9UKT6 434 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 CDH7Q9ULB5 785 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 UBQLN1Q9UMX0 589 aaKnown RBP13.18□□□□□ -0.3
UBR1-212ENST00000627960 PCDHB8Q9UN66 801 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 CACNA1HO95180 2353 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 ARHGEF37A1IGU5 675 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 WDR27A2RRH5 827 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 ANKRD63C9JTQ0 380 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 M0QZQ0 153 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 XPOTO43592 962 aaKnown RBP13.17□□□□□ -0.3
UBR1-212ENST00000627960 GALR2O43603 387 aaPredicted RBP13.17□□□□□ -0.3
UBR1-212ENST00000627960 CFHP08603 1231 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 SRFP11831 508 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 ATF2P15336 505 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 ELF1P32519 619 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 TXLNAP40222 546 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 MRE11P49959 708 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 TPGS2Q68CL5 300 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 SV2BQ7L1I2 683 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 ZNF720Q7Z2F6 126 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 CD302Q8IX05 232 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 TCEAL8Q8IYN2 117 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 SIX5Q8N196 739 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 FLCNQ8NFG4 579 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 ITFG1Q8TB96 612 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 FGF13Q92913 245 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 IRF2BPLQ9H1B7 796 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 KCNH3Q9ULD8 1083 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 NUMBLQ9Y6R0 609 aa13.17□□□□□ -0.3
UBR1-212ENST00000627960 MYMKA6NI61 221 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 PRRG1O14668 218 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 OAZ2O95190 189 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 SEC24AO95486 1093 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 PTPN2P17706 415 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 AOC1P19801 751 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 AARSP49588 968 aaKnown RBP eCLIP13.16□□□□□ -0.3
UBR1-212ENST00000627960 GUCY2FP51841 1108 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 PABPC1LQ4VXU2 614 aaKnown RBP13.16□□□□□ -0.3
UBR1-212ENST00000627960 SPATA1Q5VX52 437 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 CWF19L1Q69YN2 538 aaKnown RBP13.16□□□□□ -0.3
UBR1-212ENST00000627960 SLFN12LQ6IEE8 588 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 ZNF280DQ6N043 979 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 PARM1Q6UWI2 310 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 CCDC73Q6ZRK6 1079 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 SFR1Q86XK3 245 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 ST13P5Q8NFI4 369 aaPredicted RBP13.16□□□□□ -0.3
UBR1-212ENST00000627960 FGF14Q92915 247 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 SNX21Q969T3 373 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 HVCN1Q96D96 273 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 DNAJC19Q96DA6 116 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 PHOX2BQ99453 314 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 RPP25Q9BUL9 199 aaKnown RBP13.16□□□□□ -0.3
UBR1-212ENST00000627960 STRA6Q9BX79 667 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 PANK2Q9BZ23 570 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 AVENQ9NQS1 362 aaPredicted RBP13.16□□□□□ -0.3
UBR1-212ENST00000627960 MAFFQ9ULX9 164 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 STYXL1Q9Y6J8 313 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 SCN1AP35498 2009 aa13.16□□□□□ -0.3
UBR1-212ENST00000627960 TCHHQ07283 1943 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 KRBA1A5PL33 1030 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 TISP43B9A030 160 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 PI15O43692 258 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 PPP1R37O75864 691 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 LRG1P02750 347 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 GAP43P17677 238 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 NASPP49321 788 aaPredicted RBP13.15□□□□□ -0.3
UBR1-212ENST00000627960 ACOT2P49753 483 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 ADALQ6DHV7 355 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 JADE1Q6IE81 842 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 DSTYKQ6XUX3 929 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 MTSS1LQ765P7 747 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 NPAS3Q8IXF0 933 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 BEST2Q8NFU1 509 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 GPR152Q8TDT2 470 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 ATOH1Q92858 354 aaPredicted RBP13.15□□□□□ -0.3
UBR1-212ENST00000627960 FAM212AQ96EL1 285 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 OXCT2Q9BYC2 517 aaPredicted RBP13.15□□□□□ -0.3
UBR1-212ENST00000627960 ASB7Q9H672 318 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 MRPL44Q9H9J2 332 aaKnown RBP13.15□□□□□ -0.3
UBR1-212ENST00000627960 CYP4F11Q9HBI6 524 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 SLC2A4RGQ9NR83 387 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 SEL1LQ9UBV2 794 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 AFF4Q9UHB7 1163 aaKnown RBP13.15□□□□□ -0.3
UBR1-212ENST00000627960 AGO2Q9UKV8 859 aaKnown RBP13.15□□□□□ -0.3
UBR1-212ENST00000627960 DERAQ9Y315 318 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 MRPS23Q9Y3D9 190 aaKnown RBP13.15□□□□□ -0.3
UBR1-212ENST00000627960 INSL5Q9Y5Q6 135 aa13.15□□□□□ -0.3
UBR1-212ENST00000627960 A0A087X0B3 334 aa13.14□□□□□ -0.31
UBR1-212ENST00000627960 H0Y858 1186 aa13.14□□□□□ -0.31
UBR1-212ENST00000627960 PPEF2O14830 753 aa13.14□□□□□ -0.31
UBR1-212ENST00000627960 RHOP08100 348 aa13.14□□□□□ -0.31
UBR1-212ENST00000627960 PAX3P23760 479 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms