RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 RHOT1Q8IXI2 618 aa4.17□□□□□ -1.74
PTP4A2-220ENST00000627328 SLC44A3Q8N4M1 653 aa4.17□□□□□ -1.74
PTP4A2-220ENST00000627328 C1orf162Q8NEQ5 155 aaPredicted RBP4.17□□□□□ -1.74
PTP4A2-220ENST00000627328 NRG4Q8WWG1 115 aa4.17□□□□□ -1.74
PTP4A2-220ENST00000627328 PTCD3Q96EY7 689 aaKnown RBP4.17□□□□□ -1.74
PTP4A2-220ENST00000627328 MYOCQ99972 504 aa4.17□□□□□ -1.74
PTP4A2-220ENST00000627328 ZSWIM1Q9BR11 485 aa4.17□□□□□ -1.74
PTP4A2-220ENST00000627328 DUSP26Q9BV47 211 aa4.17□□□□□ -1.74
PTP4A2-220ENST00000627328 UNKLQ9H9P5 680 aaKnown RBP4.17□□□□□ -1.74
PTP4A2-220ENST00000627328 CASS4Q9NQ75 786 aa4.17□□□□□ -1.74
PTP4A2-220ENST00000627328 TDP1Q9NUW8 608 aa4.17□□□□□ -1.74
PTP4A2-220ENST00000627328 MKS1Q9NXB0 559 aa4.17□□□□□ -1.74
PTP4A2-220ENST00000627328 LRIT1Q9P2V4 623 aa4.17□□□□□ -1.74
PTP4A2-220ENST00000627328 MRFAP1Q9Y605 127 aa4.17□□□□□ -1.74
PTP4A2-220ENST00000627328 A0A1W2PS29 197 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 CCDC151A5D8V7 595 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 CDHR4A6H8M9 788 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 KLHL33A6NCF5 533 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 NDUFS2O75306 463 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 HOXB6P17509 224 aaKnown RBP4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 RARRES1P49788 294 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 RAB39AQ14964 217 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 PABPC1LQ4VXU2 614 aaKnown RBP4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 SYDE2Q5VT97 1194 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 FBXO42Q6P3S6 717 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 PGM2L1Q6PCE3 622 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 RD3Q7Z3Z2 195 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 RSPH3Q86UC2 560 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 CBARPQ8N350 705 aaPredicted RBP4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 ZGPATQ8N5A5 531 aaKnown RBP4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 IL17RDQ8NFM7 739 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 NACC2Q96BF6 587 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 MARS2Q96GW9 593 aaKnown RBP4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 FAXDC2Q96IV6 333 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 SLC2A13Q96QE2 648 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 ALG13Q9NP73 1137 aaKnown RBP4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 KCTD5Q9NXV2 234 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 CALCOCO1Q9P1Z2 691 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 TLK1Q9UKI8 766 aa4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 RUVBL1Q9Y265 456 aaKnown RBP4.16□□□□□ -1.74
PTP4A2-220ENST00000627328 AATKQ6ZMQ8 1374 aa4.15□□□□□ -1.74
PTP4A2-220ENST00000627328 TCRBV7S2A1N4TA0A589 114 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 KIAA0391O15091 583 aaKnown RBP4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 ORC4O43929 436 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 PRSS23O95084 383 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 ANXA1P04083 346 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 MRPS35P82673 323 aaKnown RBP4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 AOPEPQ8N6M6 819 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 C9orf106Q8NAJ2 232 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 TBC1D15Q8TC07 691 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 JADE3Q92613 823 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 DPF2Q92785 391 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 PDLIM2Q96JY6 352 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 HEPHQ9BQS7 1158 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 AIFM2Q9BRQ8 373 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 MAN1C1Q9NR34 630 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 JKAMPQ9P055 326 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 USP25Q9UHP3 1055 aa4.15□□□□□ -1.75
PTP4A2-220ENST00000627328 TRGV11A0A075B6L2 103 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 PRAMEF33A0A0G2JMD5 474 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 SHTN1A0MZ66 631 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 ALG1L2C9J202 215 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 PROM1O43490 865 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 PRAMEF10O60809 474 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 PROP1O75360 226 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 C1RP00736 705 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 SRGNP10124 158 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 FOLR3P41439 243 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 CACNA2D1P54289 1103 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 RPS7P62081 194 aaKnown RBP4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 NOMO3P69849 1222 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 SIM1P81133 766 aaPredicted RBP4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 NHLH1Q02575 133 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 SLFN5Q08AF3 891 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 ZNF844Q08AG5 666 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 NBPF8Q3BBV2 869 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 NOMO2Q5JPE7 1267 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 CLNKQ7Z7G1 428 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 PPM1NQ8N819 430 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 Q8NA96 180 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 FAM98AQ8NCA5 519 aaKnown RBP4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 SPATA3Q8NHX4 192 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 IFI44Q8TCB0 444 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 TMX3Q96JJ7 454 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 FAM126AQ9BYI3 521 aaPredicted RBP4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 R3HDMLQ9H3Y0 253 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 INTS13Q9NVM9 706 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 SLC17A6Q9P2U8 582 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 HSFX1Q9UBD0 423 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 SPATA31A6Q5VVP1 1343 aa4.14□□□□□ -1.75
PTP4A2-220ENST00000627328 GRM6O15303 877 aa4.13□□□□□ -1.75
PTP4A2-220ENST00000627328 MPPED1O15442 326 aa4.13□□□□□ -1.75
PTP4A2-220ENST00000627328 PEX1O43933 1283 aa4.13□□□□□ -1.75
PTP4A2-220ENST00000627328 SLC43A1O75387 559 aa4.13□□□□□ -1.75
PTP4A2-220ENST00000627328 FCER1AP12319 257 aa4.13□□□□□ -1.75
PTP4A2-220ENST00000627328 KCNA2P16389 499 aa4.13□□□□□ -1.75
PTP4A2-220ENST00000627328 PIGFQ07326 219 aa4.13□□□□□ -1.75
PTP4A2-220ENST00000627328 TARDBPQ13148 414 aaKnown RBP eCLIP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms