RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 HSPA6P17066 643 aa23.57■■□□□ 1.36
PNKP-220ENST00000627232 YWHAEP62258 255 aaKnown RBP23.57■■□□□ 1.36
PNKP-220ENST00000627232 PAK2Q13177 524 aa23.57■■□□□ 1.36
PNKP-220ENST00000627232 MARCH8Q5T0T0 291 aa23.57■■□□□ 1.36
PNKP-220ENST00000627232 MON1BQ7L1V2 547 aa23.57■■□□□ 1.36
PNKP-220ENST00000627232 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.57■■□□□ 1.36
PNKP-220ENST00000627232 ALG3Q92685 438 aa23.57■■□□□ 1.36
PNKP-220ENST00000627232 PDZD7Q9H5P4 517 aa23.57■■□□□ 1.36
PNKP-220ENST00000627232 FAM170AA1A519 330 aa23.56■■□□□ 1.36
PNKP-220ENST00000627232 BHMG1C9JSJ3 638 aaPredicted RBP23.56■■□□□ 1.36
PNKP-220ENST00000627232 CLSTN1O94985 981 aa23.56■■□□□ 1.36
PNKP-220ENST00000627232 FGGP02679 453 aa23.56■■□□□ 1.36
PNKP-220ENST00000627232 VTNP04004 478 aa23.56■■□□□ 1.36
PNKP-220ENST00000627232 OAS2P29728 719 aaKnown RBP23.56■■□□□ 1.36
PNKP-220ENST00000627232 PEX5P50542 639 aa23.56■■□□□ 1.36
PNKP-220ENST00000627232 NOMO3P69849 1222 aa23.56■■□□□ 1.36
PNKP-220ENST00000627232 LIN9Q5TKA1 542 aa23.56■■□□□ 1.36
PNKP-220ENST00000627232 NAA35Q5VZE5 725 aa23.56■■□□□ 1.36
PNKP-220ENST00000627232 PHF13Q86YI8 300 aaPredicted RBP23.56■■□□□ 1.36
PNKP-220ENST00000627232 GSPT2Q8IYD1 628 aaKnown RBP23.56■■□□□ 1.36
PNKP-220ENST00000627232 CAVIN3Q969G5 261 aa23.56■■□□□ 1.36
PNKP-220ENST00000627232 CYFIP2Q96F07 1278 aa23.56■■□□□ 1.36
PNKP-220ENST00000627232 EPB41L5Q9HCM4 733 aa23.56■■□□□ 1.36
PNKP-220ENST00000627232 HPCAL4Q9UM19 191 aa23.56■■□□□ 1.36
PNKP-220ENST00000627232 SART1O43290 800 aaKnown RBP23.55■■□□□ 1.36
PNKP-220ENST00000627232 THAP12O43422 761 aa23.55■■□□□ 1.36
PNKP-220ENST00000627232 STAG3L1P0CL83 205 aa23.55■■□□□ 1.36
PNKP-220ENST00000627232 CTNNA1P35221 906 aaKnown RBP23.55■■□□□ 1.36
PNKP-220ENST00000627232 MRPS25P82663 173 aaKnown RBP23.55■■□□□ 1.36
PNKP-220ENST00000627232 CDC42EP1Q00587 391 aa23.55■■□□□ 1.36
PNKP-220ENST00000627232 GUCY2DQ02846 1103 aa23.55■■□□□ 1.36
PNKP-220ENST00000627232 ZNF699Q32M78 642 aa23.55■■□□□ 1.36
PNKP-220ENST00000627232 CEP120Q8N960 986 aa23.55■■□□□ 1.36
PNKP-220ENST00000627232 CCDC26Q8TAB7 109 aa23.55■■□□□ 1.36
PNKP-220ENST00000627232 CPA5Q8WXQ8 436 aa23.55■■□□□ 1.36
PNKP-220ENST00000627232 AP1M1Q9BXS5 423 aa23.55■■□□□ 1.36
PNKP-220ENST00000627232 XYLT2Q9H1B5 865 aa23.55■■□□□ 1.36
PNKP-220ENST00000627232 ASB7Q9H672 318 aa23.55■■□□□ 1.36
PNKP-220ENST00000627232 A6NJR5 290 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 IGF2BP3O00425 579 aaKnown RBP eCLIP23.54■■□□□ 1.36
PNKP-220ENST00000627232 SPOPO43791 374 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 CXCL8P10145 99 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 AARSP49588 968 aaKnown RBP eCLIP23.54■■□□□ 1.36
PNKP-220ENST00000627232 OSTNP61366 133 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 FAM193AP78312 1265 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 TAF1CQ15572 869 aaPredicted RBP23.54■■□□□ 1.36
PNKP-220ENST00000627232 GLIPR1L2Q4G1C9 344 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 CDR2LQ86X02 465 aaPredicted RBP23.54■■□□□ 1.36
PNKP-220ENST00000627232 KIAA0319LQ8IZA0 1049 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 NLRP7Q8WX94 980 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 CHORDC1Q9UHD1 332 aaPredicted RBP23.54■■□□□ 1.36
PNKP-220ENST00000627232 GNEQ9Y223 722 aaKnown RBP23.54■■□□□ 1.36
PNKP-220ENST00000627232 PCDHA3Q9Y5H8 950 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 GOLGA6L10A0A0M3HER8 536 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 LACTBL1A8MY62 500 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 ADCY6O43306 1168 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 ARF4P18085 180 aaPredicted RBP23.54■■□□□ 1.36
PNKP-220ENST00000627232 ZNF157P51786 506 aaPredicted RBP23.54■■□□□ 1.36
PNKP-220ENST00000627232 C1QBPQ07021 282 aaKnown RBP23.54■■□□□ 1.36
PNKP-220ENST00000627232 SEL1L2Q5TEA6 688 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 SCARA3Q6AZY7 606 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 CHADLQ6NUI6 762 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 MAATS1Q7Z4T9 603 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 ZNF606Q8WXB4 792 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 USP6NLQ92738 828 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 KRT35Q92764 455 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 CISHQ9NSE2 258 aa23.54■■□□□ 1.36
PNKP-220ENST00000627232 LSM8O95777 96 aaKnown RBP23.53■■□□□ 1.36
PNKP-220ENST00000627232 ITGA4P13612 1032 aa23.53■■□□□ 1.36
PNKP-220ENST00000627232 SLC1A1P43005 524 aa23.53■■□□□ 1.36
PNKP-220ENST00000627232 SND1Q7KZF4 910 aaKnown RBP eCLIP23.53■■□□□ 1.36
PNKP-220ENST00000627232 TMEM192Q8IY95 271 aa23.53■■□□□ 1.36
PNKP-220ENST00000627232 CASKIN2Q8WXE0 1202 aa23.53■■□□□ 1.36
PNKP-220ENST00000627232 HINFPQ9BQA5 517 aa23.53■■□□□ 1.36
PNKP-220ENST00000627232 DDX47Q9H0S4 455 aaKnown RBP23.53■■□□□ 1.36
PNKP-220ENST00000627232 MED4Q9NPJ6 270 aa23.53■■□□□ 1.36
PNKP-220ENST00000627232 ST7Q9NRC1 585 aa23.53■■□□□ 1.36
PNKP-220ENST00000627232 ANAPC7Q9UJX3 599 aa23.53■■□□□ 1.36
PNKP-220ENST00000627232 DOCK3Q8IZD9 2030 aa23.53■■□□□ 1.36
PNKP-220ENST00000627232 H3BQF6 201 aa23.52■■□□□ 1.36
PNKP-220ENST00000627232 DYNC1LI2O43237 492 aaPredicted RBP23.52■■□□□ 1.36
PNKP-220ENST00000627232 TSPAN1O60635 241 aa23.52■■□□□ 1.36
PNKP-220ENST00000627232 ERLIN2O94905 339 aa23.52■■□□□ 1.36
PNKP-220ENST00000627232 RRM1P23921 792 aa23.52■■□□□ 1.36
PNKP-220ENST00000627232 ASPAP45381 313 aa23.52■■□□□ 1.36
PNKP-220ENST00000627232 CUL1Q13616 776 aa23.52■■□□□ 1.36
PNKP-220ENST00000627232 OLFML2BQ68BL8 750 aa23.52■■□□□ 1.36
PNKP-220ENST00000627232 NT5DC4Q86YG4 428 aa23.52■■□□□ 1.36
PNKP-220ENST00000627232 CPB2Q96IY4 423 aa23.52■■□□□ 1.36
PNKP-220ENST00000627232 BTBD6Q96KE9 485 aa23.52■■□□□ 1.36
PNKP-220ENST00000627232 SCLT1Q96NL6 688 aa23.52■■□□□ 1.36
PNKP-220ENST00000627232 MRPL47Q9HD33 250 aaKnown RBP23.52■■□□□ 1.36
PNKP-220ENST00000627232 ADAM22Q9P0K1 906 aa23.52■■□□□ 1.36
PNKP-220ENST00000627232 MROH7Q68CQ1 1323 aa23.52■■□□□ 1.36
PNKP-220ENST00000627232 A0A1B0GUA9 196 aa23.51■■□□□ 1.35
PNKP-220ENST00000627232 F2P00734 622 aa23.51■■□□□ 1.35
PNKP-220ENST00000627232 NFICP08651 508 aa23.51■■□□□ 1.35
PNKP-220ENST00000627232 ZNF865P0CJ78 1059 aaPredicted RBP23.51■■□□□ 1.35
PNKP-220ENST00000627232 ATICP31939 592 aa23.51■■□□□ 1.35
PNKP-220ENST00000627232 CARSP49589 748 aaKnown RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms