RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 EXOC3O60645 756 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 TBX10O75333 385 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 NFICP08651 508 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 TMEM191BP0C7N4 346 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 PRR29P0C7W0 189 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 AARSP49588 968 aaKnown RBP eCLIP15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 ENPEPQ07075 957 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 PSMD5Q16401 504 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 SV2CQ496J9 727 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 ZNF658Q5TYW1 1059 aaPredicted RBP15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 CES5AQ6NT32 575 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 ANKRD54Q6NXT1 300 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 CEP57Q86XR8 500 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 LRRC52Q8N7C0 313 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 SMRP1Q8NCR6 262 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 HASPINQ8TF76 798 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 NOC3LQ8WTT2 800 aaKnown RBP15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 ANKRD36BP1Q96IX9 119 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 NECTIN4Q96NY8 510 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 POP1Q99575 1024 aaKnown RBP15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 CXCL16Q9H2A7 254 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 PCIF1Q9H4Z3 704 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 SFXN1Q9H9B4 322 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 DPP3Q9NY33 737 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 PRKAG3Q9UGI9 489 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 MAFFQ9ULX9 164 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 PCDHB8Q9UN66 801 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 FRMD4BQ9Y2L6 1034 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 PCDHGC5Q9Y5F6 944 aa15.15■□□□□ 0.02
SNRPA1-216ENST00000626000 CUL9Q8IWT3 2517 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 PRUNE2Q8WUY3 3088 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 ANO9A1A5B4 782 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 GLP2RO95838 553 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 TNNC2P02585 160 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 ODC1P11926 461 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 LTBRP36941 435 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 TAF6P49848 677 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 CYP2J2P51589 502 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 CLCN4P51793 760 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 TFAMQ00059 246 aaKnown RBP15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 PNOCQ13519 176 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 PSMD6Q15008 389 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 DUOXA2Q1HG44 320 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 EDRF1Q3B7T1 1238 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 RTP2Q5QGT7 225 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 C9orf57Q5W0N0 161 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 PTCRAQ6ISU1 281 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 ZNF280DQ6N043 979 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 SPATA18Q8TC71 538 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 SLC22A17Q8WUG5 538 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 AUTS2Q8WXX7 1259 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 RABGGTAQ92696 567 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 MSLNLQ96KJ4 702 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 TSG101Q99816 390 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 RHOBTB2Q9BYZ6 727 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 KCTD10Q9H3F6 313 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 PRDM6Q9NQX0 595 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 MTRRQ9UBK8 725 aa15.14■□□□□ 0.01
SNRPA1-216ENST00000626000 GOLGA8IPA6NC78 632 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 GRXCR2A6NFK2 248 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 GOLGA8JA6NMD2 632 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 F8W810 466 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 M0QZQ0 153 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 PIRO00625 290 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 PSMA7O14818 248 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 NR3C1P04150 777 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 TYMPP19971 482 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 RBP5P82980 135 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 YWHAHQ04917 246 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 SPAG1Q07617 926 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 MYO1EQ12965 1108 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 DSTYKQ6XUX3 929 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 C15orf39Q6ZRI6 1047 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 TRIML1Q8N9V2 468 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 C3orf58Q8NDZ4 430 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 CMASQ8NFW8 434 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 LNX1Q8TBB1 728 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 RIPOR3Q96MK2 946 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 IKZF4Q9H2S9 585 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 CLEC1BQ9P126 229 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 CACNG4Q9UBN1 327 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 PCDHA5Q9Y5H7 936 aa15.13■□□□□ 0.01
SNRPA1-216ENST00000626000 H3BQ06 376 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 CLIC2O15247 247 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 LINC01565O15544 149 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 TKTP29401 623 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 GTF2F1P35269 517 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 MTHFRP42898 656 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 LILRA4P59901 499 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 TFF2Q03403 129 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 LRRC63Q05C16 580 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 CYP24A1Q07973 514 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 RAB33AQ14088 237 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 SMAD2Q15796 467 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 VARS2Q5ST30 1063 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 LIN9Q5TKA1 542 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 SLC8B1Q6J4K2 584 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 FOXR2Q6PJQ5 311 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 TAS1R1Q7RTX1 841 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 METTL23Q86XA0 190 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms