RNA–Protein interactions for RNA: ENST00000625916.1

SCN1A-208, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 560 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-208ENST00000625916 SRGNP10124 158 aa4.11□□□□□ -1.75
SCN1A-208ENST00000625916 FCER1AP12319 257 aa4.11□□□□□ -1.75
SCN1A-208ENST00000625916 WT1P19544 449 aaPredicted RBP4.11□□□□□ -1.75
SCN1A-208ENST00000625916 MCAMP43121 646 aa4.11□□□□□ -1.75
SCN1A-208ENST00000625916 FPGSQ05932 587 aa4.11□□□□□ -1.75
SCN1A-208ENST00000625916 SLFN5Q08AF3 891 aa4.11□□□□□ -1.75
SCN1A-208ENST00000625916 ATP2B3Q16720 1220 aa4.11□□□□□ -1.75
SCN1A-208ENST00000625916 NBPF8Q3BBV2 869 aa4.11□□□□□ -1.75
SCN1A-208ENST00000625916 KIAA0895LQ68EN5 471 aa4.11□□□□□ -1.75
SCN1A-208ENST00000625916 KCNK18Q7Z418 384 aa4.11□□□□□ -1.75
SCN1A-208ENST00000625916 TOR1AIP2Q8NFQ8 470 aa4.11□□□□□ -1.75
SCN1A-208ENST00000625916 LMBR1Q8WVP7 490 aa4.11□□□□□ -1.75
SCN1A-208ENST00000625916 INTS13Q9NVM9 706 aa4.11□□□□□ -1.75
SCN1A-208ENST00000625916 WNT6Q9Y6F9 365 aa4.11□□□□□ -1.75
SCN1A-208ENST00000625916 WIPF3A6NGB9 483 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 FAM171A2A8MVW0 826 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 PRKCGP05129 697 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 CELA2AP08217 269 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 SLC6A9P48067 706 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 SLC5A3P53794 718 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 SOX10P56693 466 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 SRSF2Q01130 221 aaKnown RBP4.1□□□□□ -1.75
SCN1A-208ENST00000625916 MGAT2Q10469 447 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 MTM1Q13496 603 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 SEPT2Q15019 361 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 FCRLBQ6BAA4 426 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 ZNF425Q6IV72 752 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 TSHZ1Q6ZSZ6 1077 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 KIAA0907Q7Z7F0 614 aaPredicted RBP4.1□□□□□ -1.75
SCN1A-208ENST00000625916 CLNKQ7Z7G1 428 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 Q8N9P0 234 aaPredicted RBP4.1□□□□□ -1.75
SCN1A-208ENST00000625916 Q8NA96 180 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 C9orf106Q8NAJ2 232 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 NLGN4YQ8NFZ3 816 aaPredicted RBP4.1□□□□□ -1.75
SCN1A-208ENST00000625916 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.1□□□□□ -1.75
SCN1A-208ENST00000625916 SLC30A5Q8TAD4 765 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 DPF1Q92782 380 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 MANSC1Q9H8J5 431 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 DNAJC28Q9NX36 388 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 DNM3Q9UQ16 869 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 PCDHGA2Q9Y5H1 932 aa4.1□□□□□ -1.75
SCN1A-208ENST00000625916 PRAMEF33A0A0G2JMD5 474 aa4.09□□□□□ -1.75
SCN1A-208ENST00000625916 A0A1W2PS29 197 aa4.09□□□□□ -1.75
SCN1A-208ENST00000625916 PRAMEF10O60809 474 aa4.09□□□□□ -1.75
SCN1A-208ENST00000625916 CHRM2P08172 466 aa4.09□□□□□ -1.75
SCN1A-208ENST00000625916 DDCP20711 480 aa4.09□□□□□ -1.75
SCN1A-208ENST00000625916 RPS7P62081 194 aaKnown RBP4.09□□□□□ -1.75
SCN1A-208ENST00000625916 MAPK7Q13164 816 aa4.09□□□□□ -1.75
SCN1A-208ENST00000625916 FAM153CQ494X1 144 aa4.09□□□□□ -1.75
SCN1A-208ENST00000625916 PREPLQ4J6C6 727 aaPredicted RBP4.09□□□□□ -1.75
SCN1A-208ENST00000625916 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
SCN1A-208ENST00000625916 ZGPATQ8N5A5 531 aaKnown RBP4.09□□□□□ -1.75
SCN1A-208ENST00000625916 PDPRQ8NCN5 879 aa4.09□□□□□ -1.75
SCN1A-208ENST00000625916 LPIN2Q92539 896 aa4.09□□□□□ -1.75
SCN1A-208ENST00000625916 PGBD1Q96JS3 809 aa4.09□□□□□ -1.75
SCN1A-208ENST00000625916 ORAI2Q96SN7 254 aa4.09□□□□□ -1.75
SCN1A-208ENST00000625916 C11orf54Q9H0W9 315 aaPredicted RBP4.09□□□□□ -1.75
SCN1A-208ENST00000625916 ST3GAL5Q9UNP4 418 aa4.09□□□□□ -1.75
SCN1A-208ENST00000625916 CDYLQ9Y232 598 aa4.09□□□□□ -1.75
SCN1A-208ENST00000625916 LINC00473A8K010 186 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 ADM5C9JUS6 153 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 PROM1O43490 865 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 HAUS5O94927 633 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 AMY1AP04745 511 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 OSMP13725 252 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 KCNA2P16389 499 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 GATA3P23771 443 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 ITPKBP27987 946 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 PTPRRQ15256 657 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 CD300EQ496F6 205 aaPredicted RBP4.08□□□□□ -1.76
SCN1A-208ENST00000625916 TAF7LQ5H9L4 462 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 UBR7Q8N806 425 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 KAT6AQ92794 2004 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 HAPLN3Q96S86 360 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 MYBBP1AQ9BQG0 1328 aaKnown RBP4.08□□□□□ -1.76
SCN1A-208ENST00000625916 TLR10Q9BXR5 811 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 VTA1Q9NP79 307 aa4.08□□□□□ -1.76
SCN1A-208ENST00000625916 AGFG2O95081 481 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 ELFN1P0C7U0 828 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 ZNF844Q08AG5 666 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 SLC10A2Q12908 348 aaPredicted RBP4.07□□□□□ -1.76
SCN1A-208ENST00000625916 GRM1Q13255 1194 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 LLGL1Q15334 1064 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 TXNRD1Q16881 649 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 MTX3Q5HYI7 312 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 DACT2Q5SW24 774 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 STRA8Q7Z7C7 330 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 RNF180Q86T96 592 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 JAZF1Q86VZ6 243 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 RASAL3Q86YV0 1011 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 VGLL2Q8N8G2 317 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 MYCBPAPQ8TBZ2 947 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 C7orf25Q9BPX7 421 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 C14orf119Q9NWQ9 140 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 NEU2Q9Y3R4 380 aa4.07□□□□□ -1.76
SCN1A-208ENST00000625916 ZNF804BA4D1E1 1349 aa4.06□□□□□ -1.76
SCN1A-208ENST00000625916 AOX1Q06278 1338 aa4.06□□□□□ -1.76
SCN1A-208ENST00000625916 TOR1BO14657 336 aa4.06□□□□□ -1.76
SCN1A-208ENST00000625916 BRINP1O60477 761 aa4.06□□□□□ -1.76
SCN1A-208ENST00000625916 ATP8B2P98198 1209 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms