RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 DDX12PQ92771 950 aa20.9■□□□□ 0.94
ATG4B-226ENST00000625810 NKD2Q969F2 451 aaPredicted RBP20.9■□□□□ 0.94
ATG4B-226ENST00000625810 CYP4F11Q9HBI6 524 aa20.9■□□□□ 0.94
ATG4B-226ENST00000625810 FBXL5Q9UKA1 691 aa20.9■□□□□ 0.94
ATG4B-226ENST00000625810 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.9■□□□□ 0.94
ATG4B-226ENST00000625810 TTC26A0AVF1 554 aa20.89■□□□□ 0.93
ATG4B-226ENST00000625810 XPOTO43592 962 aaKnown RBP20.89■□□□□ 0.93
ATG4B-226ENST00000625810 TBC1D4O60343 1298 aa20.89■□□□□ 0.93
ATG4B-226ENST00000625810 RHOP08100 348 aa20.89■□□□□ 0.93
ATG4B-226ENST00000625810 ATF2P15336 505 aa20.89■□□□□ 0.93
ATG4B-226ENST00000625810 PTPN2P17706 415 aa20.89■□□□□ 0.93
ATG4B-226ENST00000625810 TNFSF9P41273 254 aa20.89■□□□□ 0.93
ATG4B-226ENST00000625810 GPC5P78333 572 aa20.89■□□□□ 0.93
ATG4B-226ENST00000625810 MRPL58Q14197 206 aaKnown RBP20.89■□□□□ 0.93
ATG4B-226ENST00000625810 LRRC15Q8TF66 581 aa20.89■□□□□ 0.93
ATG4B-226ENST00000625810 ING5Q8WYH8 240 aa20.89■□□□□ 0.93
ATG4B-226ENST00000625810 LARP4BQ92615 738 aaKnown RBP20.89■□□□□ 0.93
ATG4B-226ENST00000625810 KCNN1Q92952 543 aa20.89■□□□□ 0.93
ATG4B-226ENST00000625810 RPF1Q9H9Y2 349 aaKnown RBP20.89■□□□□ 0.93
ATG4B-226ENST00000625810 UBQLN1Q9UMX0 589 aaKnown RBP20.89■□□□□ 0.93
ATG4B-226ENST00000625810 PCDHB8Q9UN66 801 aa20.89■□□□□ 0.93
ATG4B-226ENST00000625810 GVINP1Q7Z2Y8 2422 aa20.89■□□□□ 0.93
ATG4B-226ENST00000625810 FAM186AA6NE01 2351 aa20.89■□□□□ 0.93
ATG4B-226ENST00000625810 PTPRZ1P23471 2315 aaPredicted RBP20.89■□□□□ 0.93
ATG4B-226ENST00000625810 NOTCH4Q99466 2003 aa20.88■□□□□ 0.93
ATG4B-226ENST00000625810 MYH15Q9Y2K3 1946 aa20.88■□□□□ 0.93
ATG4B-226ENST00000625810 SPTBN4Q9H254 2564 aa20.88■□□□□ 0.93
ATG4B-226ENST00000625810 ARHGEF37A1IGU5 675 aa20.88■□□□□ 0.93
ATG4B-226ENST00000625810 LACTBL1A8MY62 500 aa20.88■□□□□ 0.93
ATG4B-226ENST00000625810 OGTO15294 1046 aa20.88■□□□□ 0.93
ATG4B-226ENST00000625810 DCNP07585 359 aaKnown RBP20.88■□□□□ 0.93
ATG4B-226ENST00000625810 ZNF131P52739 623 aa20.88■□□□□ 0.93
ATG4B-226ENST00000625810 TPGS2Q68CL5 300 aa20.88■□□□□ 0.93
ATG4B-226ENST00000625810 NPAS3Q8IXF0 933 aa20.88■□□□□ 0.93
ATG4B-226ENST00000625810 FAM212AQ96EL1 285 aa20.88■□□□□ 0.93
ATG4B-226ENST00000625810 MCRS1Q96EZ8 462 aa20.88■□□□□ 0.93
ATG4B-226ENST00000625810 CCSER1Q9C0I3 900 aa20.88■□□□□ 0.93
ATG4B-226ENST00000625810 DLGAP2Q9P1A6 1054 aa20.88■□□□□ 0.93
ATG4B-226ENST00000625810 COL4A3Q01955 1670 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 PIGRP01833 764 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 CPB1P15086 417 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 CYP3A5P20815 502 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 LRPAP1P30533 357 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 ABCD1P33897 745 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 DDIT3P35638 169 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 SPECC1Q5M775 1068 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 DSTYKQ6XUX3 929 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 TCEAL8Q8IYN2 117 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 ELMOD1Q8N336 334 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 KRI1Q8N9T8 703 aaKnown RBP20.87■□□□□ 0.93
ATG4B-226ENST00000625810 SHDQ96IW2 340 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 KXD1Q9BQD3 176 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 CORO1BQ9BR76 489 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 MSTO1Q9BUK6 570 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 FOXQ1Q9C009 403 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 CCDC39Q9UFE4 941 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 SIT1Q9Y3P8 196 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 CLIC4Q9Y696 253 aa20.87■□□□□ 0.93
ATG4B-226ENST00000625810 SEC24AO95486 1093 aa20.86■□□□□ 0.93
ATG4B-226ENST00000625810 NMT1P30419 496 aaKnown RBP20.86■□□□□ 0.93
ATG4B-226ENST00000625810 STARD6P59095 220 aa20.86■□□□□ 0.93
ATG4B-226ENST00000625810 YWHAHQ04917 246 aaPredicted RBP20.86■□□□□ 0.93
ATG4B-226ENST00000625810 ADCY1Q08828 1119 aa20.86■□□□□ 0.93
ATG4B-226ENST00000625810 ZBTB6Q15916 424 aa20.86■□□□□ 0.93
ATG4B-226ENST00000625810 SLC5A9Q2M3M2 681 aa20.86■□□□□ 0.93
ATG4B-226ENST00000625810 ZBTB41Q5SVQ8 909 aa20.86■□□□□ 0.93
ATG4B-226ENST00000625810 USP37Q86T82 979 aa20.86■□□□□ 0.93
ATG4B-226ENST00000625810 TMEM130Q8N3G9 435 aa20.86■□□□□ 0.93
ATG4B-226ENST00000625810 PJA1Q8NG27 643 aa20.86■□□□□ 0.93
ATG4B-226ENST00000625810 EPSTI1Q96J88 318 aa20.86■□□□□ 0.93
ATG4B-226ENST00000625810 GDE1Q9NZC3 331 aa20.86■□□□□ 0.93
ATG4B-226ENST00000625810 AFF4Q9UHB7 1163 aaKnown RBP20.86■□□□□ 0.93
ATG4B-226ENST00000625810 INSL5Q9Y5Q6 135 aa20.86■□□□□ 0.93
ATG4B-226ENST00000625810 WDR87Q6ZQQ6 2873 aa20.85■□□□□ 0.93
ATG4B-226ENST00000625810 A0A0B4J269 797 aa20.85■□□□□ 0.93
ATG4B-226ENST00000625810 ZNF197O14709 1029 aa20.85■□□□□ 0.93
ATG4B-226ENST00000625810 GTF2BQ00403 316 aa20.85■□□□□ 0.93
ATG4B-226ENST00000625810 ENOX2Q16206 610 aaKnown RBP20.85■□□□□ 0.93
ATG4B-226ENST00000625810 IQCEQ6IPM2 695 aa20.85■□□□□ 0.93
ATG4B-226ENST00000625810 CD302Q8IX05 232 aa20.85■□□□□ 0.93
ATG4B-226ENST00000625810 ZNF512Q96ME7 567 aaPredicted RBP20.85■□□□□ 0.93
ATG4B-226ENST00000625810 TSPAN18Q96SJ8 248 aa20.85■□□□□ 0.93
ATG4B-226ENST00000625810 AVENQ9NQS1 362 aaPredicted RBP20.85■□□□□ 0.93
ATG4B-226ENST00000625810 MAFFQ9ULX9 164 aa20.85■□□□□ 0.93
ATG4B-226ENST00000625810 TIMM13Q9Y5L4 95 aaPredicted RBP20.85■□□□□ 0.93
ATG4B-226ENST00000625810 M0QZQ0 153 aa20.84■□□□□ 0.93
ATG4B-226ENST00000625810 GLULP15104 373 aa20.84■□□□□ 0.93
ATG4B-226ENST00000625810 TXLNAP40222 546 aa20.84■□□□□ 0.93
ATG4B-226ENST00000625810 GUCY2FP51841 1108 aa20.84■□□□□ 0.93
ATG4B-226ENST00000625810 PFKPQ01813 784 aa20.84■□□□□ 0.93
ATG4B-226ENST00000625810 CEBPZQ03701 1054 aaKnown RBP20.84■□□□□ 0.93
ATG4B-226ENST00000625810 SNW1Q13573 536 aaKnown RBP20.84■□□□□ 0.93
ATG4B-226ENST00000625810 PTPAQ15257 358 aa20.84■□□□□ 0.93
ATG4B-226ENST00000625810 ZC2HC1CQ53FD0 456 aaPredicted RBP20.84■□□□□ 0.93
ATG4B-226ENST00000625810 CYP4A22Q5TCH4 519 aa20.84■□□□□ 0.93
ATG4B-226ENST00000625810 POTEHQ6S545 545 aa20.84■□□□□ 0.93
ATG4B-226ENST00000625810 USP49Q70CQ1 688 aa20.84■□□□□ 0.93
ATG4B-226ENST00000625810 PDZD4Q76G19 769 aaPredicted RBP20.84■□□□□ 0.93
ATG4B-226ENST00000625810 DYMQ7RTS9 669 aa20.84■□□□□ 0.93
ATG4B-226ENST00000625810 MAP4K3Q8IVH8 894 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms