RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 PSRC1Q6PGN9 363 aaPredicted RBP12.4□□□□□ -0.42
CHD2-205ENST00000625662 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHD2-205ENST00000625662 CEP120Q8N960 986 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 RMDN1Q96DB5 314 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 BPIFA3Q9BQP9 254 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 DCLK3Q9C098 648 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 PP2D1A8MPX8 630 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 GPC4O75487 556 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 LAG3P18627 525 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 MYBPC2Q14324 1141 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 POLD3Q15054 466 aaPredicted RBP12.4□□□□□ -0.42
CHD2-205ENST00000625662 KRT71Q3SY84 523 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 IL31Q6EBC2 164 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 CERS5Q8N5B7 392 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 VGLL2Q8N8G2 317 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 RSPH1Q8WYR4 309 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 ASB7Q9H672 318 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 CYP4F11Q9HBI6 524 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 BFARQ9NZS9 450 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 PCDHA13Q9Y5I0 950 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 MYO5BQ9ULV0 1848 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 STX1BP61266 288 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 NAA35Q5VZE5 725 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 CXCL17Q6UXB2 119 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 CENPUQ71F23 418 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 ADGRF2Q8IZF7 708 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 ATPAF2Q8N5M1 289 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 KRT35Q92764 455 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 FAF2Q96CS3 445 aa12.4□□□□□ -0.42
CHD2-205ENST00000625662 SAMSN1Q9NSI8 373 aaKnown RBP12.4□□□□□ -0.42
CHD2-205ENST00000625662 DDX20Q9UHI6 824 aaKnown RBP12.4□□□□□ -0.42
CHD2-205ENST00000625662 XRN1Q8IZH2 1706 aaKnown RBP12.4□□□□□ -0.43
CHD2-205ENST00000625662 NFAT5O94916 1531 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 F5H5T6 163 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 ZNF197O14709 1029 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 APOL1O14791 398 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 USP2O75604 605 aaPredicted RBP12.39□□□□□ -0.43
CHD2-205ENST00000625662 ITGB3P05106 788 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 TRIM49P0CI25 452 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 TRIM49CP0CI26 452 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 MYL4P12829 197 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 GUCY2CP25092 1073 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 NAA25Q14CX7 972 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 ARMCX6Q7L4S7 300 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 PLPPR4Q7Z2D5 763 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 ZNF564Q8TBZ8 553 aaPredicted RBP12.39□□□□□ -0.43
CHD2-205ENST00000625662 TSEN34Q9BSV6 310 aaKnown RBP12.39□□□□□ -0.43
CHD2-205ENST00000625662 HIPK3Q9H422 1215 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 APEX2Q9UBZ4 518 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 DUSP11O75319 330 aaKnown RBP12.39□□□□□ -0.43
CHD2-205ENST00000625662 CYP3A4P08684 503 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 MSH2P43246 934 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 CCDC121Q6ZUS5 278 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 TRAPPC11Q7Z392 1133 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 UNC45BQ8IWX7 931 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 TLR8Q9NR97 1041 aaKnown RBP12.39□□□□□ -0.43
CHD2-205ENST00000625662 CHST12Q9NRB3 414 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 LUC7L3O95232 432 aaKnown RBP12.39□□□□□ -0.43
CHD2-205ENST00000625662 SLC45A4Q5BKX6 768 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 ZPBP2Q6X784 338 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 DDX42Q86XP3 938 aaKnown RBP eCLIP12.39□□□□□ -0.43
CHD2-205ENST00000625662 WDR49Q8IV35 697 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 VSTM4Q8IW00 320 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 PPFIBP2Q8ND30 876 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 SPIRE2Q8WWL2 714 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 STK33Q9BYT3 514 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 TRIM45Q9H8W5 580 aaPredicted RBP12.39□□□□□ -0.43
CHD2-205ENST00000625662 OGFRQ9NZT2 677 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 KLK14Q9P0G3 267 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 A0A1W2PQC6 194 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 TMEM247A6NEH6 219 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 E5RI56 91 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 H0Y626 953 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 AP1G2O75843 785 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 FMO5P49326 533 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 BEX3Q00994 111 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 SEC23AQ15436 765 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 OVOS1Q6IE37 1185 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 DSG4Q86SJ6 1040 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 OOSP2Q86WS3 158 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 CGRRF1Q99675 332 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 UBE2OQ9C0C9 1292 aaKnown RBP12.39□□□□□ -0.43
CHD2-205ENST00000625662 GJB4Q9NTQ9 266 aa12.39□□□□□ -0.43
CHD2-205ENST00000625662 FAM208AQ9UK61 1670 aaKnown RBP12.38□□□□□ -0.43
CHD2-205ENST00000625662 ARHGAP42A6NI28 874 aa12.38□□□□□ -0.43
CHD2-205ENST00000625662 CCDC188H7C350 402 aa12.38□□□□□ -0.43
CHD2-205ENST00000625662 RTN2O75298 545 aa12.38□□□□□ -0.43
CHD2-205ENST00000625662 CAV1Q03135 178 aa12.38□□□□□ -0.43
CHD2-205ENST00000625662 GOLGA7BQ2TAP0 167 aa12.38□□□□□ -0.43
CHD2-205ENST00000625662 GJC2Q5T442 439 aaPredicted RBP12.38□□□□□ -0.43
CHD2-205ENST00000625662 ANKRD20A3Q5VUR7 823 aa12.38□□□□□ -0.43
CHD2-205ENST00000625662 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.38□□□□□ -0.432e-7■■□□□ 13.6
CHD2-205ENST00000625662 BAG5Q9UL15 447 aa12.38□□□□□ -0.43
CHD2-205ENST00000625662 NFU1Q9UMS0 254 aa12.38□□□□□ -0.43
CHD2-205ENST00000625662 PCDHB2Q9Y5E7 798 aa12.38□□□□□ -0.43
CHD2-205ENST00000625662 DFFAO00273 331 aa12.38□□□□□ -0.43
CHD2-205ENST00000625662 TLR2O60603 784 aa12.38□□□□□ -0.43
CHD2-205ENST00000625662 SNX2O60749 519 aa12.38□□□□□ -0.43
CHD2-205ENST00000625662 HMBSP08397 361 aa12.38□□□□□ -0.43
CHD2-205ENST00000625662 VDRP11473 427 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms