RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CA12O43570 354 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 GRM5P41594 1212 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 C2orf54Q08AI8 447 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 MFSD10Q14728 455 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 BEND6Q5SZJ8 279 aaPredicted RBP17.47■□□□□ 0.39
LDB3-208ENST00000623007 MARCH8Q5T0T0 291 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 PALB2Q86YC2 1186 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 PHF13Q86YI8 300 aaPredicted RBP17.47■□□□□ 0.39
LDB3-208ENST00000623007 UBR7Q8N806 425 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 CCDC26Q8TAB7 109 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 ARHGEF26Q96DR7 871 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 PKNOX2Q96KN3 472 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 RUNDC3BQ96NL0 473 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 ACAP3Q96P50 834 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 PSMB7Q99436 277 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 NUP85Q9BW27 656 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 DNAI2Q9GZS0 605 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 SLITRK6Q9H5Y7 841 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 MINDY3Q9H8M7 445 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 APOBEC3GQ9HC16 384 aaKnown RBP17.47■□□□□ 0.39
LDB3-208ENST00000623007 CNOT8Q9UFF9 292 aaKnown RBP17.47■□□□□ 0.39
LDB3-208ENST00000623007 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.47■□□□□ 0.39
LDB3-208ENST00000623007 ALG6Q9Y672 507 aa17.47■□□□□ 0.39
LDB3-208ENST00000623007 TTLL13PA6NNM8 815 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 CEP104O60308 925 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 TSPAN1O60635 241 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 IGHA2P01877 340 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 PAEPP09466 180 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 SMIM10L2AP0DMW4 78 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 SMIM10L2BP0DMW5 78 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 ARF4P18085 180 aaPredicted RBP17.46■□□□□ 0.39
LDB3-208ENST00000623007 FCGRTP55899 365 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 WNT7BP56706 349 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 VSNL1P62760 191 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 TAP1Q03518 808 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 ZNF667Q5HYK9 610 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 NOTUMQ6P988 496 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 MAATS1Q7Z4T9 603 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 MCOLN2Q8IZK6 566 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 ZNF446Q9NWS9 450 aa17.46■□□□□ 0.39
LDB3-208ENST00000623007 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.46■□□□□ 0.39
LDB3-208ENST00000623007 MROH7Q68CQ1 1323 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 B4GALT5O43286 388 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 DUSP11O75319 330 aaKnown RBP17.45■□□□□ 0.38
LDB3-208ENST00000623007 VTNP04004 478 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 CALB1P05937 261 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 CTNNA2P26232 953 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 PSEN2P49810 448 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 MFSD14CQ5VZR4 134 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 EEF1DP3Q658K8 133 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 SPC25Q9HBM1 224 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 GJD2Q9UKL4 321 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 PCDHGC3Q9UN70 934 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 L1RE1Q9UN81 338 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 GPR25O00155 361 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 THAP12O43422 761 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 TFRCP02786 760 aaKnown RBP17.45■□□□□ 0.38
LDB3-208ENST00000623007 GJB1P08034 283 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 EIF4BP23588 611 aaKnown RBP17.45■□□□□ 0.38
LDB3-208ENST00000623007 YARSP54577 528 aaKnown RBP17.45■□□□□ 0.38
LDB3-208ENST00000623007 MYL6P60660 151 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 TMEM132DQ14C87 1099 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 SEL1L2Q5TEA6 688 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 TAF2Q6P1X5 1199 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 SLC27A1Q6PCB7 646 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 EMBQ6PCB8 327 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 CCNI2Q6ZMN8 369 aaPredicted RBP17.45■□□□□ 0.38
LDB3-208ENST00000623007 TMEM35BQ8NCS4 154 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 MAIP1Q8WWC4 291 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 ARID3AQ99856 593 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 EPC1Q9H2F5 836 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 CISHQ9NSE2 258 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 RBM12Q9NTZ6 932 aaKnown RBP17.45■□□□□ 0.38
LDB3-208ENST00000623007 KIAA1257Q9ULG3 409 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 STRIP2Q9ULQ0 834 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 PACSIN2Q9UNF0 486 aaPredicted RBP17.45■□□□□ 0.38
LDB3-208ENST00000623007 COG5Q9UP83 839 aa17.45■□□□□ 0.38
LDB3-208ENST00000623007 MAP2K7O14733 419 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 XPOTO43592 962 aaKnown RBP17.44■□□□□ 0.38
LDB3-208ENST00000623007 CAPN15O75808 1086 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 CST3P01034 146 aaPredicted RBP17.44■□□□□ 0.38
LDB3-208ENST00000623007 IQCF3P0C7M6 154 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 CXCL8P10145 99 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 CYP2C9P11712 490 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 FAM193AP78312 1265 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 RBP5P82980 135 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 NNTQ13423 1086 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 SEZ6Q53EL9 994 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 SPOPLQ6IQ16 392 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 EFCAB13Q8IY85 973 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.44■□□□□ 0.38
LDB3-208ENST00000623007 ZSWIM1Q9BR11 485 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 FUT8Q9BYC5 575 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 BCO2Q9BYV7 579 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 XYLT2Q9H1B5 865 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 ADAMTS10Q9H324 1103 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.44■□□□□ 0.38
LDB3-208ENST00000623007 SETD4Q9NVD3 440 aa17.44■□□□□ 0.38
LDB3-208ENST00000623007 NOC2LQ9Y3T9 749 aaKnown RBP17.44■□□□□ 0.38
LDB3-208ENST00000623007 ANK1P16157 1881 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms