RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 TIPINQ9BVW5 301 aa25.99■■□□□ 1.75
CPSF1-214ENST00000622776 HEBP1Q9NRV9 189 aa25.99■■□□□ 1.75
CPSF1-214ENST00000622776 SPTBN2O15020 2390 aa25.99■■□□□ 1.75
CPSF1-214ENST00000622776 NCAM2O15394 837 aa25.98■■□□□ 1.75
CPSF1-214ENST00000622776 TOM1L1O75674 476 aa25.98■■□□□ 1.75
CPSF1-214ENST00000622776 MICAL2O94851 1124 aa25.98■■□□□ 1.75
CPSF1-214ENST00000622776 FCARP24071 287 aa25.98■■□□□ 1.75
CPSF1-214ENST00000622776 MCM4P33991 863 aa25.98■■□□□ 1.75
CPSF1-214ENST00000622776 STRN3Q13033 797 aa25.98■■□□□ 1.75
CPSF1-214ENST00000622776 SLC10A6Q3KNW5 377 aa25.98■■□□□ 1.75
CPSF1-214ENST00000622776 ZNF852Q6ZMS4 543 aa25.98■■□□□ 1.75
CPSF1-214ENST00000622776 BORCS6Q96GS4 357 aa25.98■■□□□ 1.75
CPSF1-214ENST00000622776 TBC1D32Q96NH3 1257 aa25.98■■□□□ 1.75
CPSF1-214ENST00000622776 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.98■■□□□ 1.75
CPSF1-214ENST00000622776 ANKFY1Q9P2R3 1169 aa25.98■■□□□ 1.75
CPSF1-214ENST00000622776 MRPS17Q9Y2R5 130 aaKnown RBP25.98■■□□□ 1.75
CPSF1-214ENST00000622776 CCR2P41597 374 aa25.97■■□□□ 1.75
CPSF1-214ENST00000622776 NOLC1Q14978 699 aaKnown RBP eCLIP25.97■■□□□ 1.75
CPSF1-214ENST00000622776 ZRSR1Q15695 479 aaKnown RBP25.97■■□□□ 1.75
CPSF1-214ENST00000622776 SEZ6Q53EL9 994 aa25.97■■□□□ 1.75
CPSF1-214ENST00000622776 FAM78AQ5JUQ0 283 aa25.97■■□□□ 1.75
CPSF1-214ENST00000622776 ZNF280DQ6N043 979 aa25.97■■□□□ 1.75
CPSF1-214ENST00000622776 PDZD4Q76G19 769 aaPredicted RBP25.97■■□□□ 1.75
CPSF1-214ENST00000622776 TMEM161BQ8NDZ6 487 aa25.97■■□□□ 1.75
CPSF1-214ENST00000622776 APPL2Q8NEU8 664 aa25.97■■□□□ 1.75
CPSF1-214ENST00000622776 DNASE1L2Q92874 299 aa25.97■■□□□ 1.75
CPSF1-214ENST00000622776 ZFP14Q9HCL3 533 aa25.97■■□□□ 1.75
CPSF1-214ENST00000622776 AFF4Q9UHB7 1163 aaKnown RBP25.97■■□□□ 1.75
CPSF1-214ENST00000622776 KCNG1Q9UIX4 513 aa25.97■■□□□ 1.75
CPSF1-214ENST00000622776 PATJQ8NI35 1801 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 SHISA7A6NL88 538 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 SPTLC1O15269 473 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 PLS3P13797 630 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 RPS9P46781 194 aaKnown RBP25.96■■□□□ 1.75
CPSF1-214ENST00000622776 ADCY1Q08828 1119 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 RAD51AP2Q09MP3 1159 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 GRM2Q14416 872 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 CYP4A22Q5TCH4 519 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 ERICH6BQ5W0A0 696 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 ELMOD1Q8N336 334 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 DDX12PQ92771 950 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 ASB16Q96NS5 453 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 KIF2CQ99661 725 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 MAFFQ9ULX9 164 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 PCDHB8Q9UN66 801 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 PCDHGA2Q9Y5H1 932 aa25.96■■□□□ 1.75
CPSF1-214ENST00000622776 NRG2O14511 850 aaPredicted RBP25.95■■□□□ 1.74
CPSF1-214ENST00000622776 SMTNP53814 917 aa25.95■■□□□ 1.74
CPSF1-214ENST00000622776 FZD5Q13467 585 aa25.95■■□□□ 1.74
CPSF1-214ENST00000622776 HYIQ5T013 277 aa25.95■■□□□ 1.74
CPSF1-214ENST00000622776 IQCEQ6IPM2 695 aa25.95■■□□□ 1.74
CPSF1-214ENST00000622776 ZPBP2Q6X784 338 aa25.95■■□□□ 1.74
CPSF1-214ENST00000622776 HS6ST3Q8IZP7 471 aa25.95■■□□□ 1.74
CPSF1-214ENST00000622776 ATRIPQ8WXE1 791 aa25.95■■□□□ 1.74
CPSF1-214ENST00000622776 ZNF512Q96ME7 567 aaPredicted RBP25.95■■□□□ 1.74
CPSF1-214ENST00000622776 BRD9Q9H8M2 597 aa25.95■■□□□ 1.74
CPSF1-214ENST00000622776 CEP72Q9P209 647 aa25.95■■□□□ 1.74
CPSF1-214ENST00000622776 TUBGCP4Q9UGJ1 667 aa25.95■■□□□ 1.74
CPSF1-214ENST00000622776 CLDN3O15551 220 aa25.94■■□□□ 1.74
CPSF1-214ENST00000622776 MAPTP10636 758 aaKnown RBP25.94■■□□□ 1.74
CPSF1-214ENST00000622776 MARCKSP29966 332 aaPredicted RBP25.94■■□□□ 1.74
CPSF1-214ENST00000622776 MCL1Q07820 350 aa25.94■■□□□ 1.74
CPSF1-214ENST00000622776 SYT2Q8N9I0 419 aaPredicted RBP25.94■■□□□ 1.74
CPSF1-214ENST00000622776 ZBTB44Q8NCP5 570 aa25.94■■□□□ 1.74
CPSF1-214ENST00000622776 PNMA5Q96PV4 448 aa25.94■■□□□ 1.74
CPSF1-214ENST00000622776 TRMT61BQ9BVS5 477 aaKnown RBP25.94■■□□□ 1.74
CPSF1-214ENST00000622776 ZSCAN32Q9NX65 697 aa25.94■■□□□ 1.74
CPSF1-214ENST00000622776 MYH11P35749 1972 aa25.93■■□□□ 1.74
CPSF1-214ENST00000622776 MOSPD3O75425 235 aa25.93■■□□□ 1.74
CPSF1-214ENST00000622776 CXCL8P10145 99 aa25.93■■□□□ 1.74
CPSF1-214ENST00000622776 CPB1P15086 417 aa25.93■■□□□ 1.74
CPSF1-214ENST00000622776 TWF1Q12792 350 aa25.93■■□□□ 1.74
CPSF1-214ENST00000622776 RNF19BQ6ZMZ0 732 aa25.93■■□□□ 1.74
CPSF1-214ENST00000622776 DGLUCYQ7Z3D6 616 aa25.93■■□□□ 1.74
CPSF1-214ENST00000622776 KCTD17Q8N5Z5 321 aa25.93■■□□□ 1.74
CPSF1-214ENST00000622776 NELL1Q92832 810 aa25.93■■□□□ 1.74
CPSF1-214ENST00000622776 SMARCD2Q92925 531 aa25.93■■□□□ 1.74
CPSF1-214ENST00000622776 ZSWIM3Q96MP5 696 aa25.93■■□□□ 1.74
CPSF1-214ENST00000622776 PLIN2Q99541 437 aa25.93■■□□□ 1.74
CPSF1-214ENST00000622776 PLEKHA5Q9HAU0 1116 aa25.93■■□□□ 1.74
CPSF1-214ENST00000622776 TPRP12270 2363 aaKnown RBP25.93■■□□□ 1.74
CPSF1-214ENST00000622776 PDCD11Q14690 1871 aaKnown RBP25.92■■□□□ 1.74
CPSF1-214ENST00000622776 MAN2B1O00754 1011 aa25.92■■□□□ 1.74
CPSF1-214ENST00000622776 CLTAP09496 248 aa25.92■■□□□ 1.74
CPSF1-214ENST00000622776 MYL4P12829 197 aa25.92■■□□□ 1.74
CPSF1-214ENST00000622776 EPHA5P54756 1037 aa25.92■■□□□ 1.74
CPSF1-214ENST00000622776 SLC12A3P55017 1021 aa25.92■■□□□ 1.74
CPSF1-214ENST00000622776 ATP2C1P98194 919 aaPredicted RBP25.92■■□□□ 1.74
CPSF1-214ENST00000622776 PUM1Q14671 1186 aaKnown RBP eCLIP25.92■■□□□ 1.74
CPSF1-214ENST00000622776 MCTP1Q6DN14 999 aa25.92■■□□□ 1.74
CPSF1-214ENST00000622776 TMEM130Q8N3G9 435 aa25.92■■□□□ 1.74
CPSF1-214ENST00000622776 LEMD2Q8NC56 503 aa25.92■■□□□ 1.74
CPSF1-214ENST00000622776 IRF7Q92985 503 aa25.92■■□□□ 1.74
CPSF1-214ENST00000622776 ASAH2Q9NR71 780 aa25.92■■□□□ 1.74
CPSF1-214ENST00000622776 NCDNQ9UBB6 729 aa25.92■■□□□ 1.74
CPSF1-214ENST00000622776 M0QZQ0 153 aa25.91■■□□□ 1.74
CPSF1-214ENST00000622776 PSMC3P17980 439 aa25.91■■□□□ 1.74
CPSF1-214ENST00000622776 MATR3P43243 847 aaKnown RBP eCLIP25.91■■□□□ 1.74
CPSF1-214ENST00000622776 YWHAHQ04917 246 aaPredicted RBP25.91■■□□□ 1.74
CPSF1-214ENST00000622776 SPAG1Q07617 926 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms