RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 ABCB7O75027 752 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 PRPF6O94906 941 aaKnown RBP13.37□□□□□ -0.27
CBWD3-218ENST00000622755 KIF20AO95235 890 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 HNRNPA1P09651 372 aaKnown RBP eCLIP13.37□□□□□ -0.27
CBWD3-218ENST00000622755 SPATA31D3P0C874 917 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 ODC1P11926 461 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 TKTP29401 623 aaKnown RBP13.37□□□□□ -0.27
CBWD3-218ENST00000622755 OR1D2P34982 312 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 SYKP43405 635 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 SNRPFP62306 86 aaKnown RBP13.37□□□□□ -0.27
CBWD3-218ENST00000622755 YWHAHQ04917 246 aaPredicted RBP13.37□□□□□ -0.27
CBWD3-218ENST00000622755 UVSSAQ2YD98 709 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 CTXN3Q4LDR2 81 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 VARS2Q5ST30 1063 aaKnown RBP13.37□□□□□ -0.27
CBWD3-218ENST00000622755 SPATA1Q5VX52 437 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 JADE1Q6IE81 842 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 SPATA31D4Q6ZUB0 917 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 METTL23Q86XA0 190 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 SUSD3Q96L08 255 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 ZNF560Q96MR9 790 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 RHOBTB2Q9BYZ6 727 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 HAPLN2Q9GZV7 340 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 RBAKQ9NYW8 714 aaPredicted RBP13.37□□□□□ -0.27
CBWD3-218ENST00000622755 PCDHB8Q9UN66 801 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 CDY1Q9Y6F8 540 aa13.37□□□□□ -0.27
CBWD3-218ENST00000622755 I3L4J1 428 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 PRRG1O14668 218 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 EXTL3O43909 919 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 ZMYND10O75800 440 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 LRG1P02750 347 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 C8AP07357 584 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 CPB1P15086 417 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 PFKFB1P16118 471 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 SP100P23497 879 aaPredicted RBP13.36□□□□□ -0.27
CBWD3-218ENST00000622755 HOXA9P31269 272 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 PNPLA4P41247 253 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 ARPP19P56211 112 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 PSMD2Q13200 908 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 RAB33AQ14088 237 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 SLC39A4Q6P5W5 647 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 GPD1LQ8N335 351 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 ELMOD1Q8N336 334 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 C3orf58Q8NDZ4 430 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 GOLGA5Q8TBA6 731 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 CLSTN3Q9BQT9 956 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 STRA6Q9BX79 667 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 PRKD2Q9BZL6 878 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 CD320Q9NPF0 282 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 CGNQ9P2M7 1197 aaKnown RBP13.36□□□□□ -0.27
CBWD3-218ENST00000622755 FBXW11Q9UKB1 542 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 DSEQ9UL01 958 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 POLIQ9UNA4 740 aa13.36□□□□□ -0.27
CBWD3-218ENST00000622755 XIRP2A4UGR9 3374 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 A0A0C4DFX4 3053 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 A0A1B0GVL5 298 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 ZNF233A6NK53 670 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 FAM189A1O60320 539 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 ADRB2P07550 413 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 WEE2P0C1S8 567 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 TMEM191BP0C7N4 346 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 GBP2P32456 591 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-218ENST00000622755 TFAMQ00059 246 aaKnown RBP13.35□□□□□ -0.27
CBWD3-218ENST00000622755 ZBTB6Q15916 424 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 SV2CQ496J9 727 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 ZBTB41Q5SVQ8 909 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 KANK3Q6NY19 840 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 ZNF461Q8TAF7 563 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 ANKRD36BP1Q96IX9 119 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 BLZF1Q9H2G9 400 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 DPP3Q9NY33 737 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 SERTAD1Q9UHV2 236 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 MUTYHQ9UIF7 546 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 HOOK1Q9UJC3 728 aaKnown RBP13.35□□□□□ -0.27
CBWD3-218ENST00000622755 MAFFQ9ULX9 164 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 CLUHO75153 1309 aa13.35□□□□□ -0.27
CBWD3-218ENST00000622755 A0A1W2PQ27 194 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 A0A1W2PQ64 194 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 A0A1W2PQD8 194 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 NFICP08651 508 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 TAF6P49848 677 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 CASP5P51878 434 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 MTMR3Q13615 1198 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 TPGS2Q68CL5 300 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 SLC8B1Q6J4K2 584 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 LILRA6Q6PI73 481 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 BRSK2Q8IWQ3 736 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 ZDHHC14Q8IZN3 488 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 THEM5Q8N1Q8 247 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 FSIP1Q8NA03 581 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 SLC7A14Q8TBB6 771 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 SAAL1Q96ER3 474 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 FNBP1Q96RU3 617 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 PCIF1Q9H4Z3 704 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 EPHX3Q9H6B9 360 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 WDR6Q9NNW5 1121 aaKnown RBP13.34□□□□□ -0.27
CBWD3-218ENST00000622755 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.34□□□□□ -0.27
CBWD3-218ENST00000622755 ZFP37Q9Y6Q3 630 aaPredicted RBP13.34□□□□□ -0.27
CBWD3-218ENST00000622755 VWA8A3KMH1 1905 aa13.34□□□□□ -0.27
CBWD3-218ENST00000622755 OR6C75A6NL08 312 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 TISP43B9A030 160 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms