RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 VGLL3A8MV65 326 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 THAP12O43422 761 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 TRAPPC3O43617 180 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 ADCY3O60266 1144 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 GBP1P32455 592 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 GJC1P36383 396 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 LIG3P49916 1009 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 TAS2R40P59535 323 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 IFI35P80217 286 aaPredicted RBP12.75□□□□□ -0.37
TP53-227ENST00000622645 CALCOCO2Q13137 446 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 MAMLD1Q13495 774 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 CHADLQ6NUI6 762 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 TRIM50Q86XT4 487 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 CCDC50Q8IVM0 306 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 RAPGEF5Q92565 580 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 FAM212AQ96EL1 285 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 TRIM11Q96F44 468 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 AZI2Q9H6S1 392 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 NRBP2Q9NSY0 501 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 USTQ9Y2C2 406 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 RIPK2O43353 540 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 PROSCO94903 275 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 SRGAP2CP0DJJ0 459 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 RALAP11233 206 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 RARGP13631 454 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 SLC1A1P43005 524 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 BYSLQ13895 437 aaKnown RBP12.75□□□□□ -0.37
TP53-227ENST00000622645 NLGN2Q8NFZ4 835 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 EPS8L3Q8TE67 593 aaKnown RBP12.75□□□□□ -0.37
TP53-227ENST00000622645 RUNDC3BQ96NL0 473 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 PAGR1Q9BTK6 254 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 ASIC3Q9UHC3 531 aa12.75□□□□□ -0.37
TP53-227ENST00000622645 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.75□□□□□ -0.37
TP53-227ENST00000622645 SSR1P43307 286 aaKnown RBP12.74□□□□□ -0.37
TP53-227ENST00000622645 ZNF394Q53GI3 561 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 ANKS1BQ7Z6G8 1248 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 RIOX2Q8IUF8 465 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 KCNN1Q92952 543 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 PGM2Q96G03 612 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 ZNF668Q96K58 619 aaPredicted RBP12.74□□□□□ -0.37
TP53-227ENST00000622645 TMEM134Q9H6X4 195 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 A0A087WUV0 522 aaPredicted RBP12.74□□□□□ -0.37
TP53-227ENST00000622645 TLR3O15455 904 aaKnown RBP12.74□□□□□ -0.37
TP53-227ENST00000622645 MAFO75444 373 aaPredicted RBP12.74□□□□□ -0.37
TP53-227ENST00000622645 CD58P19256 250 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 RFC5P40937 340 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 VPS41P49754 854 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 SLMAPQ14BN4 828 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 QPCTQ16769 361 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 LIN9Q5TKA1 542 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 TADA2BQ86TJ2 420 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 LRRC71Q8N4P6 559 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 ZNF606Q8WXB4 792 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 SEPT1Q8WYJ6 367 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 SLCO2A1Q92959 643 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 CCDC114Q96M63 670 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 DDX23Q9BUQ8 820 aaKnown RBP12.74□□□□□ -0.37
TP53-227ENST00000622645 MTMR12Q9C0I1 747 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 SPATC1LQ9H0A9 340 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 AAASQ9NRG9 546 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 DNAJC17Q9NVM6 304 aaKnown RBP12.74□□□□□ -0.37
TP53-227ENST00000622645 CD2APQ9Y5K6 639 aa12.74□□□□□ -0.37
TP53-227ENST00000622645 RGS16O15492 202 aaPredicted RBP12.73□□□□□ -0.37
TP53-227ENST00000622645 MSCO60682 206 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 ARIH2O95376 493 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 PGK2P07205 417 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 EDNRBP24530 442 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 TBXAS1P24557 533 aaPredicted RBP12.73□□□□□ -0.37
TP53-227ENST00000622645 CHKAP35790 457 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 RPL7AP62424 266 aaKnown RBP12.73□□□□□ -0.37
TP53-227ENST00000622645 PTP4A2Q12974 167 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 NEDD9Q14511 834 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 HSDL1Q3SXM5 330 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 GADL1Q6ZQY3 521 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 MICALL1Q8N3F8 863 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 DCLK3Q9C098 648 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 KLHL11Q9NVR0 708 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 CNTN6Q9UQ52 1028 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 PPP2R3BQ9Y5P8 575 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 FAM189A1O60320 539 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 ACSL3O95573 720 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 IVDP26440 423 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 MYL6P60660 151 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 ATP13A4Q4VNC1 1196 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 PLEKHA7Q6IQ23 1121 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 METTL7BQ6UX53 244 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 TRIM72Q6ZMU5 477 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 PHF13Q86YI8 300 aaPredicted RBP12.73□□□□□ -0.37
TP53-227ENST00000622645 RHOT1Q8IXI2 618 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 RNF149Q8NC42 400 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 PPM1EQ8WY54 764 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 PWWP2AQ96N64 755 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 SELENOSQ9BQE4 189 aa12.73□□□□□ -0.37
TP53-227ENST00000622645 CDC42EP4Q9H3Q1 356 aaKnown RBP12.73□□□□□ -0.37
TP53-227ENST00000622645 MRPL47Q9HD33 250 aaKnown RBP12.73□□□□□ -0.37
TP53-227ENST00000622645 SRRM3A6NNA2 597 aaPredicted RBP12.72□□□□□ -0.37
TP53-227ENST00000622645 IRF6O14896 467 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 MEFVO15553 781 aaPredicted RBP12.72□□□□□ -0.37
TP53-227ENST00000622645 TOM1L1O75674 476 aa12.72□□□□□ -0.37
TP53-227ENST00000622645 PAEPP09466 180 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms