RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 PPFIBP2Q8ND30 876 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 CHST13Q8NET6 341 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 TGS1Q96RS0 853 aaKnown RBP14.03□□□□□ -0.16
SIRPA-204ENST00000622179 TCP11X1B4DZS4 312 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 CAND2O75155 1236 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 CIB2O75838 187 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 GARTP22102 1010 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 SDC4P31431 198 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 SESN3P58005 492 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 ATF7IP2Q5U623 682 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 FBXW10Q5XX13 1052 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 FEZF2Q8TBJ5 459 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 TTC17Q96AE7 1141 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 AP5M1Q9H0R1 490 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 FANCGO15287 622 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 AGTP01019 485 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 RFC5P40937 340 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 TFDP2Q14188 446 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 SPARCL1Q14515 664 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 CCDC125Q86Z20 511 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 TMC2Q8TDI7 906 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 EPS8L3Q8TE67 593 aaKnown RBP14.03□□□□□ -0.16
SIRPA-204ENST00000622179 XPO6Q96QU8 1125 aaKnown RBP14.03□□□□□ -0.16
SIRPA-204ENST00000622179 ROBO1Q9Y6N7 1651 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 RCOR2Q8IZ40 523 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 DNAAF3Q8N9W5 541 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 SPC25Q9HBM1 224 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 NUP188Q5SRE5 1749 aa14.03□□□□□ -0.16
SIRPA-204ENST00000622179 GOLGA8RI6L899 631 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 ADRB2P07550 413 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 CLCN3P51790 818 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 ITGB3BPQ13352 177 aaPredicted RBP14.02□□□□□ -0.16
SIRPA-204ENST00000622179 AGBL2Q5U5Z8 902 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 NIF3L1Q9GZT8 377 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 SEMA4AQ9H3S1 761 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 SMARCAD1Q9H4L7 1026 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 NEU2Q9Y3R4 380 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 SNX9Q9Y5X1 595 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 LAMB4A4D0S4 1761 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 ADORA2BP29275 332 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 NLRP11P59045 1033 aaKnown RBP14.02□□□□□ -0.16
SIRPA-204ENST00000622179 PTENP60484 403 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 UGCGQ16739 394 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 FKBP1CQ5VVH2 108 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 KDM7AQ6ZMT4 941 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 TMBIM4Q9HC24 238 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 A1CFQ9NQ94 594 aaKnown RBP14.02□□□□□ -0.16
SIRPA-204ENST00000622179 GDF3Q9NR23 364 aa14.02□□□□□ -0.16
SIRPA-204ENST00000622179 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
SIRPA-204ENST00000622179 DSG3P32926 999 aa14.02□□□□□ -0.17
SIRPA-204ENST00000622179 BCAR1P56945 870 aa14.02□□□□□ -0.17
SIRPA-204ENST00000622179 RCN2Q14257 317 aa14.02□□□□□ -0.17
SIRPA-204ENST00000622179 IER5Q5VY09 327 aa14.02□□□□□ -0.17
SIRPA-204ENST00000622179 TRMT10CQ7L0Y3 403 aaKnown RBP14.02□□□□□ -0.17
SIRPA-204ENST00000622179 SIX6OS1Q8N1H7 587 aa14.02□□□□□ -0.17
SIRPA-204ENST00000622179 UBA3Q8TBC4 463 aa14.02□□□□□ -0.17
SIRPA-204ENST00000622179 RAB3IPQ96QF0 476 aaPredicted RBP14.02□□□□□ -0.17
SIRPA-204ENST00000622179 ALG13Q9NP73 1137 aaKnown RBP14.02□□□□□ -0.17
SIRPA-204ENST00000622179 PDGFRAP16234 1089 aa14.02□□□□□ -0.17
SIRPA-204ENST00000622179 AARSP49588 968 aaKnown RBP eCLIP14.02□□□□□ -0.17
SIRPA-204ENST00000622179 CCDC60Q8IWA6 550 aaPredicted RBP14.02□□□□□ -0.17
SIRPA-204ENST00000622179 PPM1NQ8N819 430 aa14.02□□□□□ -0.17
SIRPA-204ENST00000622179 CDKL2Q92772 493 aa14.02□□□□□ -0.17
SIRPA-204ENST00000622179 PPP1R12CQ9BZL4 782 aa14.02□□□□□ -0.17
SIRPA-204ENST00000622179 IFT122Q9HBG6 1241 aa14.02□□□□□ -0.17
SIRPA-204ENST00000622179 DDX56Q9NY93 547 aaKnown RBP14.02□□□□□ -0.17
SIRPA-204ENST00000622179 NUP98P52948 1817 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 A0A0G2JND7 137 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 A8MXQ7 604 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 MAP2K2P36507 400 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 MARSP56192 900 aaKnown RBP14.01□□□□□ -0.17
SIRPA-204ENST00000622179 EIF3EP60228 445 aaKnown RBP14.01□□□□□ -0.17
SIRPA-204ENST00000622179 GEN1Q17RS7 908 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 KCNT1Q5JUK3 1230 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 ZNF677Q86XU0 584 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 C4orf33Q8N1A6 199 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 EPS8L1Q8TE68 723 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 ACAP3Q96P50 834 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 DCTN4Q9UJW0 460 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 PLIN4Q96Q06 1357 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 CST8O60676 142 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 FAM107AO95990 144 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 MAPTP10636 758 aaKnown RBP14.01□□□□□ -0.17
SIRPA-204ENST00000622179 HSPA9P38646 679 aaKnown RBP14.01□□□□□ -0.17
SIRPA-204ENST00000622179 NAMPTP43490 491 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 HIF1AQ16665 826 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 PDZD4Q76G19 769 aaPredicted RBP14.01□□□□□ -0.17
SIRPA-204ENST00000622179 NIPA1Q7RTP0 329 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 SEC16BQ96JE7 1060 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 A0A1B0GUA9 196 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 TMEM120BA0PK00 339 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 FECHP22830 423 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 MYL6P60660 151 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 TAF12Q16514 161 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 LY6KQ17RY6 165 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 BMT2Q1RMZ1 405 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 TRIM68Q6AZZ1 485 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 TWF2Q6IBS0 349 aaKnown RBP14.01□□□□□ -0.17
SIRPA-204ENST00000622179 VSIG10LQ86VR7 867 aa14.01□□□□□ -0.17
SIRPA-204ENST00000622179 TTC25Q96NG3 672 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms