RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 AGTP01019 485 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 ITIH2P19823 946 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 TMOD1P28289 359 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 KCNJ1P48048 391 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 AP3M2P53677 418 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 CAPSQ13938 189 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 ERMARDQ5T6L9 678 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 RIOX2Q8IUF8 465 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 KATNAL2Q8IYT4 538 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 RAPGEF5Q92565 580 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 HERPUD2Q9BSE4 406 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 TARS2Q9BW92 718 aaKnown RBP10.05□□□□□ -0.8
PDPN-212ENST00000621990 CCDC113Q9H0I3 377 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 MRPL47Q9HD33 250 aaKnown RBP10.05□□□□□ -0.8
PDPN-212ENST00000621990 AAASQ9NRG9 546 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 HOMER3Q9NSC5 361 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 GPRC5DQ9NZD1 345 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 PTPN22Q9Y2R2 807 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 CD2APQ9Y5K6 639 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 DICER1Q9UPY3 1922 aaKnown RBP10.05□□□□□ -0.8
PDPN-212ENST00000621990 LRRIQ4A6NIV6 560 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 SORBS3O60504 671 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 MAFO75444 373 aaPredicted RBP10.05□□□□□ -0.8
PDPN-212ENST00000621990 CFHP08603 1231 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 GNA15P30679 374 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 NOP14P78316 857 aaKnown RBP10.05□□□□□ -0.8
PDPN-212ENST00000621990 KRT17Q04695 432 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 PDE4CQ08493 712 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 UBAP2Q5T6F2 1119 aaKnown RBP10.05□□□□□ -0.8
PDPN-212ENST00000621990 CDCA2Q69YH5 1023 aaPredicted RBP10.05□□□□□ -0.8
PDPN-212ENST00000621990 OR5B17Q8NGF7 314 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 ROPN1BQ9BZX4 212 aaPredicted RBP10.05□□□□□ -0.8
PDPN-212ENST00000621990 DCLK3Q9C098 648 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 ROPN1Q9HAT0 212 aaPredicted RBP10.05□□□□□ -0.8
PDPN-212ENST00000621990 PPANQ9NQ55 473 aaKnown RBP10.05□□□□□ -0.8
PDPN-212ENST00000621990 GGA3Q9NZ52 723 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 NUB1Q9Y5A7 615 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 SNCAIPQ9Y6H5 919 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 SCINQ9Y6U3 715 aa10.05□□□□□ -0.8
PDPN-212ENST00000621990 USP2O75604 605 aaPredicted RBP10.04□□□□□ -0.8
PDPN-212ENST00000621990 TGFB3P10600 412 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 CDR1P51861 262 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 CAV1Q03135 178 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 CALCOCO2Q13137 446 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 PPP1R7Q15435 360 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 LIN9Q5TKA1 542 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 TMEM270Q6UE05 265 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 WDR49Q8IV35 697 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 BRSK2Q8IWQ3 736 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 ANKRD35Q8N283 1001 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 RBBP8NLQ8NC74 664 aaPredicted RBP10.04□□□□□ -0.8
PDPN-212ENST00000621990 GRK7Q8WTQ7 553 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 C1orf54Q8WWF1 131 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 CCDC134Q9H6E4 229 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 CHST7Q9NS84 486 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 NRBP2Q9NSY0 501 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 MSCO60682 206 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 ASS1P00966 412 aaKnown RBP10.04□□□□□ -0.8
PDPN-212ENST00000621990 MMP8P22894 467 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 EFNA5P52803 228 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 HIRAP54198 1017 aaPredicted RBP10.04□□□□□ -0.8
PDPN-212ENST00000621990 NCOA4Q13772 614 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 NEDD9Q14511 834 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 TREML2Q5T2D2 321 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 LLGL2Q6P1M3 1020 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 SEPT14Q6ZU15 432 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 RHOT1Q8IXI2 618 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.04□□□□□ -0.8
PDPN-212ENST00000621990 ATXN2LQ8WWM7 1075 aaKnown RBP10.04□□□□□ -0.8
PDPN-212ENST00000621990 SNF8Q96H20 258 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 STMN4Q9H169 189 aaPredicted RBP10.04□□□□□ -0.8
PDPN-212ENST00000621990 ADAM22Q9P0K1 906 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 BTBD7Q9P203 1132 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 ANKFY1Q9P2R3 1169 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 PCDHB4Q9Y5E5 795 aa10.04□□□□□ -0.8
PDPN-212ENST00000621990 TCRBV5S1A1TA0A578 114 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 SOWAHBA6NEL2 793 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 ABLIM1O14639 778 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 FSBPO95073 299 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 LSM8O95777 96 aaKnown RBP10.03□□□□□ -0.8
PDPN-212ENST00000621990 FGFR4P22455 802 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 STAT5BP51692 787 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 CCNG2Q16589 344 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 FAM160B1Q5W0V3 765 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 METTL7BQ6UX53 244 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 RELL1Q8IUW5 271 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 ATL2Q8NHH9 583 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 EXD1Q8NHP7 514 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 ZNF317Q96PQ6 595 aaPredicted RBP10.03□□□□□ -0.8
PDPN-212ENST00000621990 XPO6Q96QU8 1125 aaKnown RBP10.03□□□□□ -0.8
PDPN-212ENST00000621990 SGIP1Q9BQI5 828 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 PARVAQ9NVD7 372 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 DDX20Q9UHI6 824 aaKnown RBP10.03□□□□□ -0.8
PDPN-212ENST00000621990 POLR2AP24928 1970 aaKnown RBP10.03□□□□□ -0.8
PDPN-212ENST00000621990 RGS16O15492 202 aaPredicted RBP10.03□□□□□ -0.8
PDPN-212ENST00000621990 GAS2O43903 313 aaKnown RBP10.03□□□□□ -0.8
PDPN-212ENST00000621990 TOM1L1O75674 476 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 GAS8O95995 478 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 POTEJP0CG39 1038 aa10.03□□□□□ -0.8
PDPN-212ENST00000621990 TAS2R40P59535 323 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms