RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 MAP3K21Q5TCX8 1036 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 SCARA5Q6ZMJ2 495 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 ZNF677Q86XU0 584 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 RFFLQ8WZ73 363 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 KIF12Q96FN5 646 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 THAP2Q9H0W7 228 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 XYLT2Q9H1B5 865 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 PUF60Q9UHX1 559 aaKnown RBP22.98■■□□□ 1.27
SPAST-204ENST00000621856 SIX4Q9UIU6 781 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 SNX12Q9UMY4 172 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 TRPV2Q9Y5S1 764 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 NCK2O43639 380 aa22.97■■□□□ 1.27
SPAST-204ENST00000621856 SRGAP2O75044 1071 aa22.97■■□□□ 1.27
SPAST-204ENST00000621856 TADA3O75528 432 aa22.97■■□□□ 1.27
SPAST-204ENST00000621856 FTCDO95954 541 aa22.97■■□□□ 1.27
SPAST-204ENST00000621856 HTRA3P83110 453 aa22.97■■□□□ 1.27
SPAST-204ENST00000621856 NT5DC4Q86YG4 428 aa22.97■■□□□ 1.27
SPAST-204ENST00000621856 PDCL3Q9H2J4 239 aa22.97■■□□□ 1.27
SPAST-204ENST00000621856 PLEKHA5Q9HAU0 1116 aa22.97■■□□□ 1.27
SPAST-204ENST00000621856 TSKSQ9UJT2 592 aa22.97■■□□□ 1.27
SPAST-204ENST00000621856 CNTN6Q9UQ52 1028 aa22.97■■□□□ 1.27
SPAST-204ENST00000621856 C2CD2Q9Y426 696 aa22.97■■□□□ 1.27
SPAST-204ENST00000621856 HYOU1Q9Y4L1 999 aa22.97■■□□□ 1.27
SPAST-204ENST00000621856 CDY2AQ9Y6F7 541 aa22.97■■□□□ 1.27
SPAST-204ENST00000621856 EFCAB8A8MWE9 144 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 FKTNO75072 461 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 TFRCP02786 760 aaKnown RBP22.96■■□□□ 1.27
SPAST-204ENST00000621856 CD58P19256 250 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 GNA15P30679 374 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 ARHGEF6Q15052 776 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 ZNF667Q5HYK9 610 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 RNF180Q86T96 592 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 UBR7Q8N806 425 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 TPCN2Q8NHX9 752 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 PXYLP1Q8TE99 480 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 UBXN4Q92575 508 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 ARHGEF26Q96DR7 871 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 NXF1Q9UBU9 619 aaKnown RBP22.96■■□□□ 1.27
SPAST-204ENST00000621856 YWHAEP62258 255 aaKnown RBP22.96■■□□□ 1.27
SPAST-204ENST00000621856 CCSAPQ6IQ19 270 aaPredicted RBP22.96■■□□□ 1.27
SPAST-204ENST00000621856 SLC35G2Q8TBE7 412 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 CAPZA3Q96KX2 299 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 SNX27Q96L92 541 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 APOL6Q9BWW8 343 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 DPP3Q9NY33 737 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 POLIQ9UNA4 740 aa22.96■■□□□ 1.27
SPAST-204ENST00000621856 TRIP11Q15643 1979 aa22.95■■□□□ 1.26
SPAST-204ENST00000621856 POLR2BP30876 1174 aaKnown RBP22.95■■□□□ 1.26
SPAST-204ENST00000621856 ATICP31939 592 aa22.95■■□□□ 1.26
SPAST-204ENST00000621856 GPC5P78333 572 aa22.95■■□□□ 1.26
SPAST-204ENST00000621856 CLEC16AQ2KHT3 1053 aa22.95■■□□□ 1.26
SPAST-204ENST00000621856 SERINC5Q86VE9 423 aa22.95■■□□□ 1.26
SPAST-204ENST00000621856 SESTD1Q86VW0 696 aa22.95■■□□□ 1.26
SPAST-204ENST00000621856 TMEM130Q8N3G9 435 aa22.95■■□□□ 1.26
SPAST-204ENST00000621856 NXF3Q9H4D5 531 aaKnown RBP22.95■■□□□ 1.26
SPAST-204ENST00000621856 CISHQ9NSE2 258 aa22.95■■□□□ 1.26
SPAST-204ENST00000621856 ITGA11Q9UKX5 1188 aa22.95■■□□□ 1.26
SPAST-204ENST00000621856 NOC2LQ9Y3T9 749 aaKnown RBP22.95■■□□□ 1.26
SPAST-204ENST00000621856 HES2Q9Y543 173 aa22.95■■□□□ 1.26
SPAST-204ENST00000621856 THAP12O43422 761 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 CTSHP09668 335 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 WEE2P0C1S8 567 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 TCP1P17987 556 aaKnown RBP22.94■■□□□ 1.26
SPAST-204ENST00000621856 ASPAP45381 313 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 GUCY2FP51841 1108 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 CKAP4Q07065 602 aaKnown RBP22.94■■□□□ 1.26
SPAST-204ENST00000621856 ELF2Q15723 593 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 ERCC6LQ2NKX8 1250 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 ACAD10Q6JQN1 1059 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 FAM228AQ86W67 206 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 CAGE1Q8TC20 777 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 GOLGA1Q92805 767 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 TLR10Q9BXR5 811 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 AGAP1Q9UPQ3 857 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 DERAQ9Y315 318 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 CTAGE15A4D2H0 777 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 RECQL4O94761 1208 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 INHAP05111 366 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 RPLP2P05387 115 aaKnown RBP22.94■■□□□ 1.26
SPAST-204ENST00000621856 CTAGE8P0CG41 777 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 PRLRP16471 622 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 RBP5P82980 135 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 WDR72Q3MJ13 1102 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 TEX35Q5T0J7 233 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 MEI1Q5TIA1 1274 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 CTAGE6Q86UF2 777 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 CTAGE4Q8IX94 777 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 RHOT2Q8IXI1 618 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 SYCE1Q8N0S2 351 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 ZNF296Q8WUU4 475 aaPredicted RBP22.94■■□□□ 1.26
SPAST-204ENST00000621856 WNT8BQ93098 351 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 OSBPL9Q96SU4 736 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 OSGEPQ9NPF4 335 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 CTTNBP2NLQ9P2B4 639 aa22.94■■□□□ 1.26
SPAST-204ENST00000621856 ZNF185O15231 689 aa22.93■■□□□ 1.26
SPAST-204ENST00000621856 ZNF132P52740 706 aa22.93■■□□□ 1.26
SPAST-204ENST00000621856 PTGISQ16647 500 aa22.93■■□□□ 1.26
SPAST-204ENST00000621856 TRIM72Q6ZMU5 477 aa22.93■■□□□ 1.26
SPAST-204ENST00000621856 LRRC57Q8N9N7 239 aa22.93■■□□□ 1.26
SPAST-204ENST00000621856 SLAIN1Q8ND83 568 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms