RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 SHC4Q6S5L8 630 aa19.52■□□□□ 0.72
SCAMP4-213ENST00000621748 SLC7A14Q8TBB6 771 aa19.52■□□□□ 0.72
SCAMP4-213ENST00000621748 HVCN1Q96D96 273 aa19.52■□□□□ 0.72
SCAMP4-213ENST00000621748 MFSD14AQ96MC6 490 aa19.52■□□□□ 0.72
SCAMP4-213ENST00000621748 MYADMQ96S97 322 aa19.52■□□□□ 0.72
SCAMP4-213ENST00000621748 FGFBP2Q9BYJ0 223 aa19.52■□□□□ 0.72
SCAMP4-213ENST00000621748 ARIH1Q9Y4X5 557 aaPredicted RBP19.52■□□□□ 0.72
SCAMP4-213ENST00000621748 MUC6Q6W4X9 2439 aa19.52■□□□□ 0.71
SCAMP4-213ENST00000621748 NOTCH4Q99466 2003 aa19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 CCL16O15467 120 aa19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 HNRNPA1P09651 372 aaKnown RBP eCLIP19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 ROR1Q01973 937 aa19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 UVSSAQ2YD98 709 aa19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 L1TD1Q5T7N2 865 aaKnown RBP19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 SPATA1Q5VX52 437 aa19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 JADE1Q6IE81 842 aa19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 GRASPQ7Z6J2 395 aaPredicted RBP19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 UBALD2Q8IYN6 164 aa19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 KCNK12Q9HB15 430 aa19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 OLFML3Q9NRN5 406 aa19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 PANK4Q9NVE7 773 aa19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 FBXL5Q9UKA1 691 aa19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 AGO2Q9UKV8 859 aaKnown RBP19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 CFAP45Q9UL16 551 aa19.51■□□□□ 0.71
SCAMP4-213ENST00000621748 WDR27A2RRH5 827 aa19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 PPEF2O14830 753 aa19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 ABLIM3O94929 683 aa19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 GCNT3O95395 438 aa19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 HOXA9P31269 272 aa19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 NTHL1P78549 312 aa19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 CRELD2Q6UXH1 353 aaPredicted RBP19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 CD302Q8IX05 232 aa19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 ZNF461Q8TAF7 563 aa19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 POMGNT1Q8WZA1 660 aa19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 DHX58Q96C10 678 aa19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 ACCSQ96QU6 501 aa19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 TSPAN18Q96SJ8 248 aa19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 KBTBD4Q9NVX7 518 aa19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 PCDHB8Q9UN66 801 aa19.5■□□□□ 0.71
SCAMP4-213ENST00000621748 SCN1AP35498 2009 aa19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 H7C4K7 107 aa19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 M0QZQ0 153 aa19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 XPOTO43592 962 aaKnown RBP19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 PDGFBP01127 241 aaPredicted RBP19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 NFICP08651 508 aa19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 AARSP49588 968 aaKnown RBP eCLIP19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 ARPP19P56211 112 aa19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 CTXN3Q4LDR2 81 aa19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 ATL3Q6DD88 541 aa19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 GET4Q7L5D6 327 aaPredicted RBP19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 APPL2Q8NEU8 664 aa19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 RSAD2Q8WXG1 361 aa19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 TNMDQ9H2S6 317 aa19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 EPS15L1Q9UBC2 864 aa19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 PCDHA7Q9UN72 937 aa19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 POLIQ9UNA4 740 aa19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 PCDHB13Q9Y5F0 798 aa19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.49■□□□□ 0.71
SCAMP4-213ENST00000621748 LAMP2P13473 410 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 FSHRP23945 695 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 DNM1Q05193 864 aaKnown RBP19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 TDGQ13569 410 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 POSTNQ15063 836 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 CCDC65Q8IXS2 484 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 FBXL6Q8N531 539 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 GLIS3Q8NEA6 775 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 ZSWIM2Q8NEG5 633 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 BEST2Q8NFU1 509 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 KCNG4Q8TDN1 519 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 HPS3Q969F9 1004 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 TRIM9Q9C026 710 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 CUEDC2Q9H467 287 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 ASB7Q9H672 318 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 HCFC1R1Q9NWW0 138 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 IGSF9Q9P2J2 1179 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 EXOC7Q9UPT5 735 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 DERAQ9Y315 318 aa19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 TIMM13Q9Y5L4 95 aaPredicted RBP19.48■□□□□ 0.71
SCAMP4-213ENST00000621748 XYLBO75191 536 aa19.47■□□□□ 0.71
SCAMP4-213ENST00000621748 PRPF6O94906 941 aaKnown RBP19.47■□□□□ 0.71
SCAMP4-213ENST00000621748 SEC24AO95486 1093 aa19.47■□□□□ 0.71
SCAMP4-213ENST00000621748 ATF2P15336 505 aa19.47■□□□□ 0.71
SCAMP4-213ENST00000621748 PLA2G5P39877 138 aa19.47■□□□□ 0.71
SCAMP4-213ENST00000621748 TMEM132DQ14C87 1099 aa19.47■□□□□ 0.71
SCAMP4-213ENST00000621748 C9orf57Q5W0N0 161 aa19.47■□□□□ 0.71
SCAMP4-213ENST00000621748 ZNF280DQ6N043 979 aa19.47■□□□□ 0.71
SCAMP4-213ENST00000621748 RTL10Q7L3V2 364 aa19.47■□□□□ 0.71
SCAMP4-213ENST00000621748 IQUBQ8NA54 791 aa19.47■□□□□ 0.71
SCAMP4-213ENST00000621748 DNMT3BQ9UBC3 853 aaKnown RBP19.47■□□□□ 0.71
SCAMP4-213ENST00000621748 ANO9A1A5B4 782 aa19.46■□□□□ 0.71
SCAMP4-213ENST00000621748 ARHGEF37A1IGU5 675 aa19.46■□□□□ 0.71
SCAMP4-213ENST00000621748 PIRO00625 290 aa19.46■□□□□ 0.71
SCAMP4-213ENST00000621748 SPTLC1O15269 473 aa19.46■□□□□ 0.71
SCAMP4-213ENST00000621748 POLR2DO15514 142 aaKnown RBP19.46■□□□□ 0.71
SCAMP4-213ENST00000621748 OAZ2O95190 189 aa19.46■□□□□ 0.71
SCAMP4-213ENST00000621748 POU2F2P09086 479 aa19.46■□□□□ 0.71
SCAMP4-213ENST00000621748 ELF1P32519 619 aa19.46■□□□□ 0.71
SCAMP4-213ENST00000621748 ME1P48163 572 aa19.46■□□□□ 0.71
SCAMP4-213ENST00000621748 WNT7BP56706 349 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms