RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 ARNTLO00327 626 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 HARSP12081 509 aaKnown RBP18.33■□□□□ 0.52
TARDBP-225ENST00000621715 MUTP22033 750 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 MAGEA9P43362 315 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 LPAL2Q16609 132 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 SLC10A6Q3KNW5 377 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 HAUS3Q68CZ6 603 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 RNF19BQ6ZMZ0 732 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 IGSF22Q8N9C0 903 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 DNASE1L2Q92874 299 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 SUSD3Q96L08 255 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 MMTAG2Q9BU76 263 aaKnown RBP18.33■□□□□ 0.52
TARDBP-225ENST00000621715 FOXP1Q9H334 677 aaPredicted RBP18.33■□□□□ 0.52
TARDBP-225ENST00000621715 CRISPLD1Q9H336 500 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 ZFP14Q9HCL3 533 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 ZNF334Q9HCZ1 680 aaPredicted RBP18.33■□□□□ 0.52
TARDBP-225ENST00000621715 LRWD1Q9UFC0 647 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 PCDHB6Q9Y5E3 794 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 ANK1P16157 1881 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 CHD8Q9HCK8 2581 aa18.33■□□□□ 0.52
TARDBP-225ENST00000621715 SYN3O14994 580 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 SLC16A4O15374 487 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 GDI1P31150 447 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 ELF1P32519 619 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 YARSP54577 528 aaKnown RBP18.32■□□□□ 0.52
TARDBP-225ENST00000621715 SPAG1Q07617 926 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 DMWDQ09019 674 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 TWF1Q12792 350 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 SAFBQ15424 915 aaKnown RBP eCLIP18.32■□□□□ 0.52
TARDBP-225ENST00000621715 CTXN3Q4LDR2 81 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 C1orf186Q6ZWK4 172 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 GPIHBP1Q8IV16 184 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 FBXO18Q8NFZ0 1043 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 SNX29Q8TEQ0 813 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 TBC1D32Q96NH3 1257 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 CNTNAP3BQ96NU0 1288 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 ACAP3Q96P50 834 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 NELL2Q99435 816 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 LRRC3Q9BY71 257 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 MRPL4Q9BYD3 311 aaKnown RBP18.32■□□□□ 0.52
TARDBP-225ENST00000621715 CNTNAP3Q9BZ76 1288 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 CHRDQ9H2X0 955 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 TMEM134Q9H6X4 195 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 BRD9Q9H8M2 597 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 TOPORSQ9NS56 1045 aaPredicted RBP18.32■□□□□ 0.52
TARDBP-225ENST00000621715 CFAP47Q6ZTR5 3102 aa18.32■□□□□ 0.52
TARDBP-225ENST00000621715 LAMA1P25391 3075 aa18.31■□□□□ 0.52
TARDBP-225ENST00000621715 OR4Q2P0C623 313 aa18.31■□□□□ 0.52
TARDBP-225ENST00000621715 MCF2P10911 925 aa18.31■□□□□ 0.52
TARDBP-225ENST00000621715 EPHA5P54756 1037 aa18.31■□□□□ 0.52
TARDBP-225ENST00000621715 PTGDRQ13258 359 aa18.31■□□□□ 0.52
TARDBP-225ENST00000621715 ORC2Q13416 577 aaPredicted RBP18.31■□□□□ 0.52
TARDBP-225ENST00000621715 TEAD2Q15562 447 aa18.31■□□□□ 0.52
TARDBP-225ENST00000621715 RINT1Q6NUQ1 792 aa18.31■□□□□ 0.52
TARDBP-225ENST00000621715 MPZL3Q6UWV2 235 aa18.31■□□□□ 0.52
TARDBP-225ENST00000621715 PDZD4Q76G19 769 aaPredicted RBP18.31■□□□□ 0.52
TARDBP-225ENST00000621715 SHKBP1Q8TBC3 707 aa18.31■□□□□ 0.52
TARDBP-225ENST00000621715 DDX12PQ92771 950 aa18.31■□□□□ 0.52
TARDBP-225ENST00000621715 TRMT61BQ9BVS5 477 aaKnown RBP18.31■□□□□ 0.52
TARDBP-225ENST00000621715 KMT5AQ9NQR1 393 aa18.31■□□□□ 0.52
TARDBP-225ENST00000621715 SLC38A7Q9NVC3 462 aa18.31■□□□□ 0.52
TARDBP-225ENST00000621715 C2orf42Q9NWW7 574 aa18.31■□□□□ 0.52
TARDBP-225ENST00000621715 TIMM13Q9Y5L4 95 aaPredicted RBP18.31■□□□□ 0.52
TARDBP-225ENST00000621715 MAP1BP46821 2468 aaKnown RBP18.31■□□□□ 0.52
TARDBP-225ENST00000621715 MICAL2O94851 1124 aa18.3■□□□□ 0.52
TARDBP-225ENST00000621715 MYL4P12829 197 aa18.3■□□□□ 0.52
TARDBP-225ENST00000621715 SATB1Q01826 763 aa18.3■□□□□ 0.52
TARDBP-225ENST00000621715 STXBP5Q5T5C0 1151 aa18.3■□□□□ 0.52
TARDBP-225ENST00000621715 ZSCAN18Q8TBC5 510 aaPredicted RBP18.3■□□□□ 0.52
TARDBP-225ENST00000621715 SMARCD2Q92925 531 aa18.3■□□□□ 0.52
TARDBP-225ENST00000621715 LRRC3BQ96PB8 259 aa18.3■□□□□ 0.52
TARDBP-225ENST00000621715 DNAJC25Q9H1X3 360 aa18.3■□□□□ 0.52
TARDBP-225ENST00000621715 LMAN1LQ9HAT1 526 aa18.3■□□□□ 0.52
TARDBP-225ENST00000621715 NUB1Q9Y5A7 615 aa18.3■□□□□ 0.52
TARDBP-225ENST00000621715 PIAS3Q9Y6X2 628 aa18.3■□□□□ 0.52
TARDBP-225ENST00000621715 KIF26AQ9ULI4 1882 aaPredicted RBP18.3■□□□□ 0.52
TARDBP-225ENST00000621715 TSC2P49815 1807 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 DCDC2BA2VCK2 349 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 KRT37O76014 449 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 CHRNB1P11230 501 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 PSMC3P17980 439 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 RPL9P32969 192 aaKnown RBP18.29■□□□□ 0.52
TARDBP-225ENST00000621715 MCM4P33991 863 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 SOX9P48436 509 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 GUCY2FP51841 1108 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 RAD51AP2Q09MP3 1159 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 SRSF5Q13243 272 aaKnown RBP18.29■□□□□ 0.52
TARDBP-225ENST00000621715 DMP1Q13316 513 aaPredicted RBP18.29■□□□□ 0.52
TARDBP-225ENST00000621715 PDIA5Q14554 519 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 TPGS2Q68CL5 300 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 TMC8Q8IU68 726 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 TTC9BQ8N6N2 239 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 BEST2Q8NFU1 509 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 FAM3CQ92520 227 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 PGLYRP2Q96PD5 576 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 TCHPQ9BT92 498 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 RBM12Q9NTZ6 932 aaKnown RBP18.29■□□□□ 0.52
TARDBP-225ENST00000621715 ANKFY1Q9P2R3 1169 aa18.29■□□□□ 0.52
TARDBP-225ENST00000621715 AFF4Q9UHB7 1163 aaKnown RBP18.29■□□□□ 0.52
TARDBP-225ENST00000621715 MRPS17Q9Y2R5 130 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms