RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 DNTTIP2Q5QJE6 756 aaKnown RBP17.1■□□□□ 0.33
CBWD3-216ENST00000621396 GLYCTKQ8IVS8 523 aa17.1■□□□□ 0.33
CBWD3-216ENST00000621396 ZNF710Q8N1W2 664 aa17.1■□□□□ 0.33
CBWD3-216ENST00000621396 GAD1Q99259 594 aa17.1■□□□□ 0.33
CBWD3-216ENST00000621396 IMPG2Q9BZV3 1241 aa17.1■□□□□ 0.33
CBWD3-216ENST00000621396 LACRTQ9GZZ8 138 aa17.1■□□□□ 0.33
CBWD3-216ENST00000621396 NBNO60934 754 aa17.09■□□□□ 0.33
CBWD3-216ENST00000621396 TLE2Q04725 743 aa17.09■□□□□ 0.33
CBWD3-216ENST00000621396 ORC1Q13415 861 aa17.09■□□□□ 0.33
CBWD3-216ENST00000621396 CUL2Q13617 745 aa17.09■□□□□ 0.33
CBWD3-216ENST00000621396 LRRC8DQ7L1W4 858 aa17.09■□□□□ 0.33
CBWD3-216ENST00000621396 RTN4RL1Q86UN2 441 aaPredicted RBP17.09■□□□□ 0.33
CBWD3-216ENST00000621396 SHC3Q92529 594 aa17.09■□□□□ 0.33
CBWD3-216ENST00000621396 MIOSQ9NXC5 875 aa17.09■□□□□ 0.33
CBWD3-216ENST00000621396 ATP11BQ9Y2G3 1177 aa17.09■□□□□ 0.33
CBWD3-216ENST00000621396 CYLC1P35663 651 aaPredicted RBP17.09■□□□□ 0.33
CBWD3-216ENST00000621396 AP3M2P53677 418 aa17.09■□□□□ 0.33
CBWD3-216ENST00000621396 FAAP100Q0VG06 881 aa17.09■□□□□ 0.33
CBWD3-216ENST00000621396 FAM26DQ5JW98 314 aa17.09■□□□□ 0.33
CBWD3-216ENST00000621396 TMEM270Q6UE05 265 aa17.09■□□□□ 0.33
CBWD3-216ENST00000621396 PACSIN1Q9BY11 444 aa17.09■□□□□ 0.33
CBWD3-216ENST00000621396 PTGESO14684 152 aa17.08■□□□□ 0.33
CBWD3-216ENST00000621396 KCNJ6P48051 423 aa17.08■□□□□ 0.33
CBWD3-216ENST00000621396 CDR1P51861 262 aa17.08■□□□□ 0.33
CBWD3-216ENST00000621396 GCNT1Q02742 428 aa17.08■□□□□ 0.33
CBWD3-216ENST00000621396 KYAT1Q16773 422 aa17.08■□□□□ 0.33
CBWD3-216ENST00000621396 SGSM1Q2NKQ1 1148 aa17.08■□□□□ 0.33
CBWD3-216ENST00000621396 AGMOQ6ZNB7 445 aa17.08■□□□□ 0.33
CBWD3-216ENST00000621396 APBB1IPQ7Z5R6 666 aaPredicted RBP17.08■□□□□ 0.33
CBWD3-216ENST00000621396 FAM71AQ8IYT1 594 aa17.08■□□□□ 0.33
CBWD3-216ENST00000621396 CCDC170Q8IYT3 715 aa17.08■□□□□ 0.33
CBWD3-216ENST00000621396 GSTCDQ8NEC7 633 aa17.08■□□□□ 0.33
CBWD3-216ENST00000621396 ZNF592Q92610 1267 aa17.08■□□□□ 0.33
CBWD3-216ENST00000621396 ARMC5Q96C12 935 aa17.08■□□□□ 0.33
CBWD3-216ENST00000621396 CNTN3Q9P232 1028 aa17.08■□□□□ 0.33
CBWD3-216ENST00000621396 C2CD2Q9Y426 696 aa17.08■□□□□ 0.33
CBWD3-216ENST00000621396 FERP16591 822 aa17.08■□□□□ 0.32
CBWD3-216ENST00000621396 ATF7P17544 494 aaPredicted RBP17.08■□□□□ 0.32
CBWD3-216ENST00000621396 GJA8P48165 433 aa17.08■□□□□ 0.32
CBWD3-216ENST00000621396 NOP9Q86U38 636 aaKnown RBP17.08■□□□□ 0.32
CBWD3-216ENST00000621396 OLIG1Q8TAK6 271 aa17.08■□□□□ 0.32
CBWD3-216ENST00000621396 HPDLQ96IR7 371 aa17.08■□□□□ 0.32
CBWD3-216ENST00000621396 TET1Q8NFU7 2136 aa17.08■□□□□ 0.32
CBWD3-216ENST00000621396 EIF3CLB5ME19 914 aaKnown RBP17.07■□□□□ 0.32
CBWD3-216ENST00000621396 DDX3XO00571 662 aaKnown RBP eCLIP17.07■□□□□ 0.32
CBWD3-216ENST00000621396 ZC3H11AO75152 810 aaKnown RBP eCLIP17.07■□□□□ 0.32
CBWD3-216ENST00000621396 ITGA4P13612 1032 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 SELPP16109 830 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 CYP2C18P33260 490 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 ASPAP45381 313 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 MAPK8IP2Q13387 824 aaPredicted RBP17.07■□□□□ 0.32
CBWD3-216ENST00000621396 ZBTB6Q15916 424 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 LNX1Q8TBB1 728 aaPredicted RBP17.07■□□□□ 0.32
CBWD3-216ENST00000621396 EIF3CQ99613 913 aaKnown RBP17.07■□□□□ 0.32
CBWD3-216ENST00000621396 PLEKHA5Q9HAU0 1116 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 CHST12Q9NRB3 414 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 TAS2R14Q9NYV8 317 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 MYO6Q9UM54 1294 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 INPP5FQ9Y2H2 1132 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 PCDHB4Q9Y5E5 795 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 SSU72P8A0A1W2PR75 194 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 ZSCAN12O43309 604 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 POMCP01189 267 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 ACO1P21399 889 aaKnown RBP17.07■□□□□ 0.32
CBWD3-216ENST00000621396 RFX1P22670 979 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 PRKCIP41743 596 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 SPA17Q15506 151 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 TCTN1Q2MV58 587 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 KIAA1328Q86T90 577 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 DBF4BQ8NFT6 615 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 EPS8L1Q8TE68 723 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 LINC01599Q8WXQ3 324 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 MMS19Q96T76 1030 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 HIPK3Q9H422 1215 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 SMYD3Q9H7B4 428 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 GUCA1BQ9UMX6 200 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 PCDHA13Q9Y5I0 950 aa17.07■□□□□ 0.32
CBWD3-216ENST00000621396 ARL5CA6NH57 179 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 IPO7O95373 1038 aaKnown RBP17.06■□□□□ 0.32
CBWD3-216ENST00000621396 RPLP2P05387 115 aaKnown RBP17.06■□□□□ 0.32
CBWD3-216ENST00000621396 MMEP08473 750 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 CFHP08603 1231 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 SCNN1GP51170 649 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 DSC3Q14574 896 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 PTPN14Q15678 1187 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 SLC18A3Q16572 532 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 DEFB128Q7Z7B8 93 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 PAAF1Q9BRP4 392 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 NIF3L1Q9GZT8 377 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 SDCBP2Q9H190 292 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 R3HCC1Q9Y3T6 440 aaKnown RBP17.06■□□□□ 0.32
CBWD3-216ENST00000621396 A0A0U1RQF3 1178 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 FANCGO15287 622 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 TNNT1P13805 278 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 CYP11B1P15538 503 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 ARHGAP25P42331 645 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 RPUSD2Q8IZ73 545 aaKnown RBP17.06■□□□□ 0.32
CBWD3-216ENST00000621396 CAGE1Q8TC20 777 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 CISHQ9NSE2 258 aa17.06■□□□□ 0.32
CBWD3-216ENST00000621396 HMGXB4Q9UGU5 601 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms