RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 PIK3CAP42336 1068 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 RAB27AP51159 221 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 GTF2BQ00403 316 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 ADCY1Q08828 1119 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 TUSC3Q13454 348 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 ARHGAP44Q17R89 818 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 ATL3Q6DD88 541 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 RSPO2Q6UXX9 243 aaPredicted RBP4.98□□□□□ -1.61
SYCP1-210ENST00000618516 C11orf57Q6ZUT1 292 aaPredicted RBP4.98□□□□□ -1.61
SYCP1-210ENST00000618516 PHLDB2Q86SQ0 1253 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 PPM1KQ8N3J5 372 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 SLC7A14Q8TBB6 771 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 C7orf25Q9BPX7 421 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 VN1R3Q9BXE9 311 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 SEZ6LQ9BYH1 1024 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 LRRC27Q9C0I9 530 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 CHST12Q9NRB3 414 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 SAMSN1Q9NSI8 373 aaKnown RBP4.98□□□□□ -1.61
SYCP1-210ENST00000618516 KIAA1468Q9P260 1216 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 NUDT5Q9UKK9 219 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 FREM2Q5SZK8 3169 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 WDR81Q562E7 1941 aa4.98□□□□□ -1.61
SYCP1-210ENST00000618516 BECN2A8MW95 431 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 CLDN5O00501 218 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 CYB561D2O14569 222 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 HOXA2O43364 376 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 EOMESO95936 686 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 TNNC2P02585 160 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 CD19P15391 556 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 GBP2P32456 591 aaPredicted RBP4.97□□□□□ -1.61
SYCP1-210ENST00000618516 ELF1P32519 619 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 GPR15P49685 360 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 ZNF131P52739 623 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 DUSP4Q13115 394 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 RAPGEF1Q13905 1077 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 PSMD5Q16401 504 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 DCAF4L1Q3SXM0 396 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 ANO6Q4KMQ2 910 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 SLC39A12Q504Y0 691 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 GJB7Q6PEY0 223 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 CRELD2Q6UXH1 353 aaPredicted RBP4.97□□□□□ -1.61
SYCP1-210ENST00000618516 GET4Q7L5D6 327 aaPredicted RBP4.97□□□□□ -1.61
SYCP1-210ENST00000618516 RPAINQ86UA6 219 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 LUZP1Q86V48 1076 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 COLGALT2Q8IYK4 626 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 AOPEPQ8N6M6 819 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 C1orf127Q8N9H9 656 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 PHOSPHO2Q8TCD6 241 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 PLEKHO2Q8TD55 490 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 SPIRE2Q8WWL2 714 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 SNX27Q96L92 541 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 TSG101Q99816 390 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 TAB2Q9NYJ8 693 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 ZMYM2Q9UBW7 1377 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 CETN3O15182 167 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 MCF2P10911 925 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 LMO2P25791 158 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 ADORA2BP29275 332 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 YWHAHQ04917 246 aaPredicted RBP4.97□□□□□ -1.61
SYCP1-210ENST00000618516 GRIK3Q13003 919 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 PTPROQ16827 1216 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 DDR2Q16832 855 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 RASIP1Q5U651 963 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 C12orf29Q8N999 325 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 BEST2Q8NFU1 509 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 TAS1R2Q8TE23 839 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 CPLX3Q8WVH0 158 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 KAT5Q92993 513 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 HPDLQ96IR7 371 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 ANKRD36BP1Q96IX9 119 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 SENP8Q96LD8 212 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 TTPALQ9BTX7 342 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 COLEC11Q9BWP8 271 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 MRPL9Q9BYD2 267 aaKnown RBP4.97□□□□□ -1.61
SYCP1-210ENST00000618516 SMG9Q9H0W8 520 aaKnown RBP4.97□□□□□ -1.61
SYCP1-210ENST00000618516 SMYD3Q9H7B4 428 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 TMEM206Q9H813 350 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 C17orf75Q9HAS0 396 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 OLFML3Q9NRN5 406 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 SEPT11Q9NVA2 429 aaKnown RBP4.97□□□□□ -1.61
SYCP1-210ENST00000618516 MARCH5Q9NX47 278 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 GIT1Q9Y2X7 761 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 SF3B1O75533 1304 aaKnown RBP eCLIP4.97□□□□□ -1.61
SYCP1-210ENST00000618516 DMXL1Q9Y485 3027 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 H3BNC9 293 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 EPB41P11171 864 aaKnown RBP4.97□□□□□ -1.61
SYCP1-210ENST00000618516 MYL4P12829 197 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 ATP1A3P13637 1013 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 KRT5P13647 590 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 GRM5P41594 1212 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 GLUD2P49448 558 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 LILRA4P59901 499 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 ERVK-21P61565 698 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 HTRA4P83105 476 aaPredicted RBP4.97□□□□□ -1.61
SYCP1-210ENST00000618516 MCL1Q07820 350 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 RBL2Q08999 1139 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 PAK1Q13153 545 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 C2CD6Q53TS8 623 aa4.97□□□□□ -1.61
SYCP1-210ENST00000618516 VARS2Q5ST30 1063 aaKnown RBP4.97□□□□□ -1.61
SYCP1-210ENST00000618516 LIN9Q5TKA1 542 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms