RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 RABL2AQ9UBK7 228 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-208ENST00000618395 A0A0G2JPF8 293 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 HNRNPCL3B7ZW38 293 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 CFBP00751 764 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 HNRNPCL4P0DMR1 293 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 PSMB9P28065 219 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 EIF2S3P41091 472 aaKnown RBP15.71■□□□□ 0.11
COL5A1-208ENST00000618395 GPHNQ9NQX3 736 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-208ENST00000618395 RESTQ13127 1097 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 NDUFAF6Q330K2 333 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 RBBP8Q99708 897 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 ZC3H12CQ9C0D7 883 aaKnown RBP15.71■□□□□ 0.11
COL5A1-208ENST00000618395 DDX20Q9UHI6 824 aaKnown RBP15.71■□□□□ 0.11
COL5A1-208ENST00000618395 EFCAB10A6NFE3 127 aa15.71■□□□□ 0.1
COL5A1-208ENST00000618395 LRRC53A6NM62 1247 aa15.71■□□□□ 0.1
COL5A1-208ENST00000618395 M0QZ92 97 aa15.71■□□□□ 0.1
COL5A1-208ENST00000618395 PEX1O43933 1283 aa15.71■□□□□ 0.1
COL5A1-208ENST00000618395 MXI1P50539 228 aa15.71■□□□□ 0.1
COL5A1-208ENST00000618395 NCKAP1LP55160 1127 aa15.71■□□□□ 0.1
COL5A1-208ENST00000618395 C2CD6Q53TS8 623 aa15.71■□□□□ 0.1
COL5A1-208ENST00000618395 XKR9Q5GH70 373 aa15.71■□□□□ 0.1
COL5A1-208ENST00000618395 CMTR1Q8N1G2 835 aaKnown RBP15.71■□□□□ 0.1
COL5A1-208ENST00000618395 PAGE5Q96GU1 130 aa15.71■□□□□ 0.1
COL5A1-208ENST00000618395 HEY2Q9UBP5 337 aa15.71■□□□□ 0.1
COL5A1-208ENST00000618395 SPDYAQ5MJ70 313 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 GAS2O43903 313 aaKnown RBP15.7■□□□□ 0.1
COL5A1-208ENST00000618395 EIF6P56537 245 aaKnown RBP15.7■□□□□ 0.1
COL5A1-208ENST00000618395 ZNF200P98182 395 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-208ENST00000618395 MXD4Q14582 209 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-208ENST00000618395 P3H1Q32P28 736 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 PARP10Q53GL7 1025 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 SLFN12LQ6IEE8 588 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 MTHFD1LQ6UB35 978 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 ZC3H7BQ9UGR2 993 aaKnown RBP15.7■□□□□ 0.1
COL5A1-208ENST00000618395 ABCC5O15440 1437 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 SMNDC1O75940 238 aaKnown RBP eCLIP15.7■□□□□ 0.1
COL5A1-208ENST00000618395 ADAM17P78536 824 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 KRT33BQ14525 404 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 SHROOM1Q2M3G4 852 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-208ENST00000618395 SHCBP1Q8NEM2 672 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 PICK1Q9NRD5 415 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 POLGP54098 1239 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-208ENST00000618395 RAB25P57735 213 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 TIMM10P62072 90 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 CRELD2Q6UXH1 353 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-208ENST00000618395 ADSSL1Q8N142 457 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 ATL2Q8NHH9 583 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 LRRC20Q8TCA0 184 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 FAM92AA1XBS5 289 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 PHF2O75151 1096 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 UBOX5O94941 541 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 TFDP2Q14188 446 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 ACAP2Q15057 778 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 EFHC1Q5JVL4 640 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 DGKKQ5KSL6 1271 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 ZNF564Q8TBZ8 553 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-208ENST00000618395 CDHR1Q96JP9 859 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 PLEKHG4BQ96PX9 1271 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 EFCAB1Q9HAE3 211 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 MAP3K20Q9NYL2 800 aaKnown RBP15.7■□□□□ 0.1
COL5A1-208ENST00000618395 DGKIO75912 1065 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 GMFBP60983 142 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 PEX5LQ8IYB4 626 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 ACCSQ96QU6 501 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 CWF19L1Q69YN2 538 aaKnown RBP15.7■□□□□ 0.1
COL5A1-208ENST00000618395 LRRC6Q86X45 466 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 GDPD5Q8WTR4 605 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 IL1RL2Q9HB29 575 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 PHF8Q9UPP1 1060 aa15.7■□□□□ 0.1
COL5A1-208ENST00000618395 RIMS2Q9UQ26 1411 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 SSNA1O43805 119 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 ADAMTS2O95450 1211 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 ITIH2P19823 946 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 TSNQ15631 228 aaKnown RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 OR7A2PQ8NGA2 310 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 ANKRD49Q8WVL7 239 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 FUT8Q9BYC5 575 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 MOSPD1Q9UJG1 213 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 PHTF1Q9UMS5 762 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 H2AFYO75367 372 aaKnown RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 LDHAP00338 332 aaKnown RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 PTH1RQ03431 593 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 COL23A1Q86Y22 540 aaPredicted RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 NUAK2Q9H093 628 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 POLD4Q9HCU8 107 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 ZNF224Q9NZL3 707 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 CD2BP2O95400 341 aaKnown RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 E4F1Q66K89 784 aaPredicted RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 HES6Q96HZ4 224 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 RBM15Q96T37 977 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 CNOT8Q9UFF9 292 aaKnown RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 CIDEBQ9UHD4 219 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 TRMT6Q9UJA5 497 aaKnown RBP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 SF3B1O75533 1304 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL5A1-208ENST00000618395 OSBPP22059 807 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 SERPINB9P50453 376 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 CHRNB3Q05901 458 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 C4orf33Q8N1A6 199 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 XAGE2Q96GT9 111 aa15.69■□□□□ 0.1
COL5A1-208ENST00000618395 NGLY1Q96IV0 654 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms