RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 SP8Q8IXZ3 490 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 TEX13BQ9BXU2 312 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 DCP1AQ9NPI6 582 aaPredicted RBP11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 ANKRD12Q6UB98 2062 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 NECTIN1Q15223 517 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 DGKDQ16760 1214 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 WDR72Q3MJ13 1102 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 C6orf10Q5SRN2 563 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 GUF1Q8N442 669 aaKnown RBP11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 ATL2Q8NHH9 583 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 SLITRK1Q96PX8 696 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 SPACA6W5XKT8 324 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 SSTR3P32745 418 aaPredicted RBP11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 TKFCQ3LXA3 575 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 HAUS6Q7Z4H7 955 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 CLEC4FQ8N1N0 589 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 DIS3LQ8TF46 1054 aaKnown RBP11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 CDYLQ9Y232 598 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 C6orf222P0C671 652 aaPredicted RBP11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 CYP2D6P10635 497 aa11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 NCAPHQ15003 741 aa11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 KIZQ2M2Z5 673 aa11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 SGSM1Q2NKQ1 1148 aa11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 GPR63Q9BZJ6 419 aa11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 XPO7Q9UIA9 1087 aaKnown RBP11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 DYRK3O43781 588 aa11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 GH1P01241 217 aa11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 QRICH1Q2TAL8 776 aa11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 NUP93Q8N1F7 819 aa11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 ZNF280CQ8ND82 737 aa11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 SMG5Q9UPR3 1016 aaKnown RBP11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 METP08581 1390 aa11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 VCAM1P19320 739 aa11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 CENPAP49450 140 aa11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 SLC7A14Q8TBB6 771 aa11.71□□□□□ -0.54
CCDC144B-208ENST00000618081 VGLL3A8MV65 326 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 EYA4O95677 639 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 SCP2P22307 547 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 GUCA1AP43080 201 aaPredicted RBP11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 POTEAQ6S8J7 498 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 FAM162AQ96A26 154 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 PABPC5Q96DU9 382 aaKnown RBP11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 CDHR2Q9BYE9 1310 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 MTSS1O43312 755 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 IRF1P10914 325 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 DMTNQ08495 405 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 CUL3Q13618 768 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 TAF1CQ15572 869 aaPredicted RBP11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 C17orf80Q9BSJ5 609 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 BRD8Q9H0E9 1235 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 KLHL11Q9NVR0 708 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 ITGA4P13612 1032 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 NCOA4Q13772 614 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 NFRKBQ6P4R8 1299 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 NOTUMQ6P988 496 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 CHMP1BQ7LBR1 199 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 ADCK1Q86TW2 530 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 DHX40Q8IX18 779 aaKnown RBP11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 HSPBP1Q9NZL4 362 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 CPSF1Q10570 1443 aaKnown RBP11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 NMT2O60551 498 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 LRG1P02750 347 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 VCLP18206 1134 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 ANXA11P50995 505 aaKnown RBP11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 MRPS15P82914 257 aaKnown RBP11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 CMTM5Q96DZ9 223 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 AGPAT1Q99943 283 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 MLXIPLQ9NP71 852 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 PRAMEF22A3QJZ6 481 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 EEF2KO00418 725 aaKnown RBP11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 ZNF157P51786 506 aaPredicted RBP11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 HMGCS2P54868 508 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 MAPRE1Q15691 268 aaKnown RBP11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 GLYCTKQ8IVS8 523 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 ADGRA2Q96PE1 1338 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 RPS6KA5O75582 802 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 ALDH7A1P49419 539 aaKnown RBP11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 SERPINB9P50453 376 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 PTK6Q13882 451 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 HIST2H2ACQ16777 129 aaPredicted RBP11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 HIST2H2AA3Q6FI13 130 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 SCFD2Q8WU76 684 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 ARL8AQ96BM9 186 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 AGAP3Q96P47 875 aa11.7□□□□□ -0.54
CCDC144B-208ENST00000618081 TOMM70O94826 608 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 UPP2O95045 317 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 PNMA6AP0CW24 399 aaPredicted RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 ZNF211Q13398 564 aaPredicted RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 ZNF668Q96K58 619 aaPredicted RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 MYO1GB0I1T2 1018 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 RSPH10B2B2RC85 870 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 RSPH10BP0C881 870 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 ALDH18A1P54886 795 aaKnown RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 AFDNP55196 1824 aaKnown RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 RUNX1T1Q06455 604 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 DYNC1I2Q13409 638 aaKnown RBP11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 PDK1Q15118 436 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 TRIM65Q6PJ69 517 aa11.69□□□□□ -0.54
CCDC144B-208ENST00000618081 EFL1Q7Z2Z2 1120 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms