RNA–Protein interactions for RNA: ENST00000617999.4

UPK1A-204, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPK1A, Length 1,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-204ENST00000617999 ZNF280BQ86YH2 543 aa16.44■□□□□ 0.22
UPK1A-204ENST00000617999 LRRC43Q8N309 656 aa16.44■□□□□ 0.22
UPK1A-204ENST00000617999 C3orf58Q8NDZ4 430 aa16.44■□□□□ 0.22
UPK1A-204ENST00000617999 CACTINQ8WUQ7 758 aaKnown RBP16.44■□□□□ 0.22
UPK1A-204ENST00000617999 TOP1MTQ969P6 601 aa16.44■□□□□ 0.22
UPK1A-204ENST00000617999 RAB20Q9NX57 234 aa16.44■□□□□ 0.22
UPK1A-204ENST00000617999 DDHD2O94830 711 aa16.43■□□□□ 0.22
UPK1A-204ENST00000617999 CST3P01034 146 aaPredicted RBP16.43■□□□□ 0.22
UPK1A-204ENST00000617999 GYPCP04921 128 aa16.43■□□□□ 0.22
UPK1A-204ENST00000617999 TRPC3Q13507 836 aa16.43■□□□□ 0.22
UPK1A-204ENST00000617999 RASIP1Q5U651 963 aa16.43■□□□□ 0.22
UPK1A-204ENST00000617999 SPECC1LQ69YQ0 1117 aa16.43■□□□□ 0.22
UPK1A-204ENST00000617999 SPC24Q8NBT2 197 aa16.43■□□□□ 0.22
UPK1A-204ENST00000617999 RABGGTAQ92696 567 aa16.43■□□□□ 0.22
UPK1A-204ENST00000617999 KAT5Q92993 513 aa16.43■□□□□ 0.22
UPK1A-204ENST00000617999 PDLIM2Q96JY6 352 aa16.43■□□□□ 0.22
UPK1A-204ENST00000617999 PCMTD1Q96MG8 357 aaPredicted RBP16.43■□□□□ 0.22
UPK1A-204ENST00000617999 ARID3AQ99856 593 aa16.43■□□□□ 0.22
UPK1A-204ENST00000617999 MRPL9Q9BYD2 267 aaKnown RBP16.43■□□□□ 0.22
UPK1A-204ENST00000617999 PLCB1Q9NQ66 1216 aa16.43■□□□□ 0.22
UPK1A-204ENST00000617999 AGAP1Q9UPQ3 857 aa16.43■□□□□ 0.22
UPK1A-204ENST00000617999 NUB1Q9Y5A7 615 aa16.43■□□□□ 0.22
UPK1A-204ENST00000617999 PLXNA4Q9HCM2 1894 aa16.43■□□□□ 0.22
UPK1A-204ENST00000617999 F8W810 466 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 PODXLO00592 558 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 PIRO00625 290 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 CLSTN1O94985 981 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 CLCNKBP51801 687 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 GOLGA8FQ08AF8 430 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 GOLGA8DPQ0D2H9 430 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 CETN1Q12798 172 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 KLHDC7AQ5VTJ3 777 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 IQCEQ6IPM2 695 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 PHLDB3Q6NSJ2 640 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 SCARA5Q6ZMJ2 495 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 COLGALT2Q8IYK4 626 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 LRRC52Q8N7C0 313 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 EHBP1Q8NDI1 1231 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 ZNF689Q96CS4 500 aaPredicted RBP16.42■□□□□ 0.22
UPK1A-204ENST00000617999 ZNF560Q96MR9 790 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 NT5C1BQ96P26 610 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 SLC9A7Q96T83 725 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 NRDE2Q9H7Z3 1164 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 APEX2Q9UBZ4 518 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 DNAJB4Q9UDY4 337 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 POLIQ9UNA4 740 aa16.42■□□□□ 0.22
UPK1A-204ENST00000617999 ATG2AQ2TAZ0 1938 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 RNF225M0QZC1 329 aaPredicted RBP16.41■□□□□ 0.22
UPK1A-204ENST00000617999 SPTLC1O15269 473 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 ZC3H11AO75152 810 aaKnown RBP eCLIP16.41■□□□□ 0.22
UPK1A-204ENST00000617999 KIF4AO95239 1232 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 GJB5O95377 273 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 UCHL3P15374 230 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 TRIM21P19474 475 aaKnown RBP16.41■□□□□ 0.22
UPK1A-204ENST00000617999 ASPAP45381 313 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 RBP5P82980 135 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 TBX2Q13207 712 aaPredicted RBP16.41■□□□□ 0.22
UPK1A-204ENST00000617999 NEK11Q8NG66 645 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 TATDN2Q93075 761 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 HPDLQ96IR7 371 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 KREMEN1Q96MU8 473 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 NAA15Q9BXJ9 866 aaKnown RBP16.41■□□□□ 0.22
UPK1A-204ENST00000617999 IMPG2Q9BZV3 1241 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 NIF3L1Q9GZT8 377 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 SMYD3Q9H7B4 428 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 VRTNQ9H8Y1 702 aa16.41■□□□□ 0.22
UPK1A-204ENST00000617999 RNF216Q9NWF9 866 aaPredicted RBP16.41■□□□□ 0.22
UPK1A-204ENST00000617999 H0YGN5 161 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 STAU1O95793 577 aaKnown RBP16.4■□□□□ 0.22
UPK1A-204ENST00000617999 ITGB1P05556 798 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 PNMA6AP0CW24 399 aaPredicted RBP16.4■□□□□ 0.22
UPK1A-204ENST00000617999 PBX3P40426 434 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 FXR1P51114 621 aaKnown RBP eCLIP16.4■□□□□ 0.22
UPK1A-204ENST00000617999 POLR2FP61218 127 aaKnown RBP16.4■□□□□ 0.22
UPK1A-204ENST00000617999 RNASELQ05823 741 aaKnown RBP16.4■□□□□ 0.22
UPK1A-204ENST00000617999 UPP1Q16831 310 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 FIGNQ5HY92 759 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 E4F1Q66K89 784 aaPredicted RBP16.4■□□□□ 0.22
UPK1A-204ENST00000617999 CD300LGQ6UXG3 332 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 RRAGAQ7L523 313 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 GPIHBP1Q8IV16 184 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 HERC6Q8IVU3 1022 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 CMTR2Q8IYT2 770 aaKnown RBP16.4■□□□□ 0.22
UPK1A-204ENST00000617999 PPM1KQ8N3J5 372 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 HASPINQ8TF76 798 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 RSPH1Q8WYR4 309 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 BAP1Q92560 729 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 RNPC3Q96LT9 517 aaKnown RBP16.4■□□□□ 0.22
UPK1A-204ENST00000617999 GPR88Q9GZN0 384 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 SDCBP2Q9H190 292 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 NLRC4Q9NPP4 1024 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 MARCH5Q9NX47 278 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 CEP72Q9P209 647 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 KANSL3Q9P2N6 904 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 PRG3Q9Y2Y8 225 aaPredicted RBP16.4■□□□□ 0.22
UPK1A-204ENST00000617999 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.4■□□□□ 0.22
UPK1A-204ENST00000617999 MRPL42Q9Y6G3 142 aaKnown RBP16.4■□□□□ 0.22
UPK1A-204ENST00000617999 SLC4A7Q9Y6M7 1214 aa16.4■□□□□ 0.22
UPK1A-204ENST00000617999 TNRC18O15417 2968 aaPredicted RBP16.4■□□□□ 0.22
UPK1A-204ENST00000617999 COL4A4P53420 1690 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms