RNA–Protein interactions for RNA: ENST00000617848.4

CNTNAP3B-213, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-213ENST00000617848 SECISBP2LQ93073 1101 aaKnown RBP9.38□□□□□ -0.91
CNTNAP3B-213ENST00000617848 TUBB2BQ9BVA1 445 aa9.38□□□□□ -0.91
CNTNAP3B-213ENST00000617848 MTMR12Q9C0I1 747 aa9.38□□□□□ -0.91
CNTNAP3B-213ENST00000617848 APOBEC3GQ9HC16 384 aaKnown RBP9.38□□□□□ -0.91
CNTNAP3B-213ENST00000617848 SNTG2Q9NY99 539 aa9.38□□□□□ -0.91
CNTNAP3B-213ENST00000617848 DERAQ9Y315 318 aa9.38□□□□□ -0.91
CNTNAP3B-213ENST00000617848 C2CD2Q9Y426 696 aa9.38□□□□□ -0.91
CNTNAP3B-213ENST00000617848 TRIM17Q9Y577 477 aa9.38□□□□□ -0.91
CNTNAP3B-213ENST00000617848 NUB1Q9Y5A7 615 aa9.38□□□□□ -0.91
CNTNAP3B-213ENST00000617848 PCDHB4Q9Y5E5 795 aa9.38□□□□□ -0.91
CNTNAP3B-213ENST00000617848 CDY2AQ9Y6F7 541 aa9.38□□□□□ -0.91
CNTNAP3B-213ENST00000617848 GRIN2DO15399 1336 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 CTAGE9A4FU28 777 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 BTNL10A8MVZ5 291 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 MEFVO15553 781 aaPredicted RBP9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 RPS6KA5O75582 802 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 URI1O94763 535 aaPredicted RBP9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 CLSTN1O94985 981 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 KRT5P13647 590 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 CHRNB2P17787 502 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 ACO1P21399 889 aaKnown RBP9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 ATICP31939 592 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 ACLYP53396 1101 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 YWHAEP62258 255 aaKnown RBP9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 PTK7Q13308 1070 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 TMEM132DQ14C87 1099 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 IFI16Q16666 785 aaKnown RBP9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 FAM228AQ86W67 206 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 ZNF677Q86XU0 584 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 GLYCTKQ8IVS8 523 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 TRIM58Q8NG06 486 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 OLIG1Q8TAK6 271 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 TMEM40Q8WWA1 233 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 ELMO3Q96BJ8 720 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 FAXDC2Q96IV6 333 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 NOX5Q96PH1 765 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 TSPAN18Q96SJ8 248 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 NAPGQ99747 312 aaPredicted RBP9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 BEGAINQ9BUH8 593 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 EIF2AQ9BY44 585 aaKnown RBP9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 TRIM6Q9C030 488 aaPredicted RBP9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 L2HGDHQ9H9P8 463 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 SEPT11Q9NVA2 429 aaKnown RBP9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 PIN4Q9Y237 131 aaKnown RBP9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 NOC2LQ9Y3T9 749 aaKnown RBP9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 PTCH2Q9Y6C5 1203 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 DUSP10Q9Y6W6 482 aa9.37□□□□□ -0.91
CNTNAP3B-213ENST00000617848 MACROD2A1Z1Q3 448 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 RTN2O75298 545 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 MOCS3O95396 460 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 CHRNA1P02708 482 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 NFICP08651 508 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 KRT19P08727 400 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 TMEM253P0C7T8 217 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 GZMAP12544 262 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 CYP11B1P15538 503 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 PDE6CP51160 858 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 GALCP54803 685 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 NAP1L1P55209 391 aaKnown RBP9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 RBP5P82980 135 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 CDR2Q01850 454 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 MGAT3Q09327 533 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 DSG2Q14126 1118 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 ZNF699Q32M78 642 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 ZNF667Q5HYK9 610 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 UBXN11Q5T124 520 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 NOP9Q86U38 636 aaKnown RBP9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 SLC47A2Q86VL8 602 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 UBR7Q8N806 425 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 C1orf127Q8N9H9 656 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 SLC20A1Q8WUM9 679 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 PTCD2Q8WV60 388 aaKnown RBP9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 GLT1D1Q96MS3 346 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 ALS2CR12Q96Q35 445 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 PCDHB18PQ96TA0 734 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 PACSIN1Q9BY11 444 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 SENP6Q9GZR1 1112 aaPredicted RBP9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 NIF3L1Q9GZT8 377 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 XYLT2Q9H1B5 865 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 ISCUQ9H1K1 167 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 CHST12Q9NRB3 414 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 DPP3Q9NY33 737 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 SIX4Q9UIU6 781 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 NOCTQ9UK39 431 aaKnown RBP9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 ITGA11Q9UKX5 1188 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 ST3GAL5Q9UNP4 418 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 CNTN6Q9UQ52 1028 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 PCDHB2Q9Y5E7 798 aa9.36□□□□□ -0.91
CNTNAP3B-213ENST00000617848 SCN10AQ9Y5Y9 1956 aa9.35□□□□□ -0.91
CNTNAP3B-213ENST00000617848 UMODL1Q5DID0 1318 aa9.35□□□□□ -0.91
CNTNAP3B-213ENST00000617848 A0A0A6YYK5 440 aaPredicted RBP9.35□□□□□ -0.91
CNTNAP3B-213ENST00000617848 ANO9A1A5B4 782 aa9.35□□□□□ -0.91
CNTNAP3B-213ENST00000617848 ANKRD62A6NC57 917 aa9.35□□□□□ -0.91
CNTNAP3B-213ENST00000617848 TMCO5BA8MYB1 307 aa9.35□□□□□ -0.91
CNTNAP3B-213ENST00000617848 GPR182O15218 404 aa9.35□□□□□ -0.91
CNTNAP3B-213ENST00000617848 FANCGO15287 622 aa9.35□□□□□ -0.91
CNTNAP3B-213ENST00000617848 SLU7O95391 586 aaKnown RBP9.35□□□□□ -0.91
CNTNAP3B-213ENST00000617848 STAU1O95793 577 aaKnown RBP9.35□□□□□ -0.91
CNTNAP3B-213ENST00000617848 ITGB3P05106 788 aa9.35□□□□□ -0.91
CNTNAP3B-213ENST00000617848 MMEP08473 750 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms