RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 GTF2BQ00403 316 aa24.2■■□□□ 1.46
NEDD4L-237ENST00000617539 ZC2HC1CQ53FD0 456 aaPredicted RBP24.2■■□□□ 1.46
NEDD4L-237ENST00000617539 PARM1Q6UWI2 310 aa24.2■■□□□ 1.46
NEDD4L-237ENST00000617539 RTL10Q7L3V2 364 aa24.2■■□□□ 1.46
NEDD4L-237ENST00000617539 MAP4K3Q8IVH8 894 aa24.2■■□□□ 1.46
NEDD4L-237ENST00000617539 DDX12PQ92771 950 aa24.2■■□□□ 1.46
NEDD4L-237ENST00000617539 KIF12Q96FN5 646 aa24.2■■□□□ 1.46
NEDD4L-237ENST00000617539 FOXD4L1Q9NU39 408 aa24.2■■□□□ 1.46
NEDD4L-237ENST00000617539 WNT16Q9UBV4 365 aa24.2■■□□□ 1.46
NEDD4L-237ENST00000617539 ZFP37Q9Y6Q3 630 aaPredicted RBP24.2■■□□□ 1.46
NEDD4L-237ENST00000617539 COL4A3Q01955 1670 aa24.19■■□□□ 1.46
NEDD4L-237ENST00000617539 ARHGEF37A1IGU5 675 aa24.19■■□□□ 1.46
NEDD4L-237ENST00000617539 H0Y858 1186 aa24.19■■□□□ 1.46
NEDD4L-237ENST00000617539 SEC24AO95486 1093 aa24.19■■□□□ 1.46
NEDD4L-237ENST00000617539 AOC1P19801 751 aa24.19■■□□□ 1.46
NEDD4L-237ENST00000617539 ARPP19P56211 112 aa24.19■■□□□ 1.46
NEDD4L-237ENST00000617539 CEBPZQ03701 1054 aaKnown RBP24.19■■□□□ 1.46
NEDD4L-237ENST00000617539 SLC5A9Q2M3M2 681 aa24.19■■□□□ 1.46
NEDD4L-237ENST00000617539 POTEHQ6S545 545 aa24.19■■□□□ 1.46
NEDD4L-237ENST00000617539 NPAS3Q8IXF0 933 aa24.19■■□□□ 1.46
NEDD4L-237ENST00000617539 GPR152Q8TDT2 470 aa24.19■■□□□ 1.46
NEDD4L-237ENST00000617539 IKZF4Q9H2S9 585 aa24.19■■□□□ 1.46
NEDD4L-237ENST00000617539 PCDHB8Q9UN66 801 aa24.19■■□□□ 1.46
NEDD4L-237ENST00000617539 ANKRD63C9JTQ0 380 aa24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 H7C4K7 107 aa24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 PPEF2O14830 753 aa24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 ATF2P15336 505 aa24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 AARSP49588 968 aaKnown RBP eCLIP24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 PPP2R3AQ06190 1150 aa24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 CTXN3Q4LDR2 81 aa24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 PABPC1LQ4VXU2 614 aaKnown RBP24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 USP28Q96RU2 1077 aa24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 MSTO1Q9BUK6 570 aa24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 ST6GALNAC4Q9H4F1 302 aa24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 STK17AQ9UEE5 414 aa24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 CPSF3Q9UKF6 684 aaKnown RBP24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 CA14Q9ULX7 337 aa24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 UBQLN1Q9UMX0 589 aaKnown RBP24.18■■□□□ 1.46
NEDD4L-237ENST00000617539 DMDP11532 3685 aa24.17■■□□□ 1.46
NEDD4L-237ENST00000617539 M0QZQ0 153 aa24.17■■□□□ 1.46
NEDD4L-237ENST00000617539 CYP3A5P20815 502 aa24.17■■□□□ 1.46
NEDD4L-237ENST00000617539 KYAT1Q16773 422 aa24.17■■□□□ 1.46
NEDD4L-237ENST00000617539 DYMQ7RTS9 669 aa24.17■■□□□ 1.46
NEDD4L-237ENST00000617539 SFR1Q86XK3 245 aa24.17■■□□□ 1.46
NEDD4L-237ENST00000617539 TCEAL8Q8IYN2 117 aa24.17■■□□□ 1.46
NEDD4L-237ENST00000617539 ING5Q8WYH8 240 aa24.17■■□□□ 1.46
NEDD4L-237ENST00000617539 SLC2A4RGQ9NR83 387 aa24.17■■□□□ 1.46
NEDD4L-237ENST00000617539 KCNH3Q9ULD8 1083 aa24.17■■□□□ 1.46
NEDD4L-237ENST00000617539 A0A087X0B3 334 aa24.16■■□□□ 1.46
NEDD4L-237ENST00000617539 MYMKA6NI61 221 aa24.16■■□□□ 1.46
NEDD4L-237ENST00000617539 K7ELQ4 463 aaPredicted RBP24.16■■□□□ 1.46
NEDD4L-237ENST00000617539 PPP1R37O75864 691 aa24.16■■□□□ 1.46
NEDD4L-237ENST00000617539 RHOP08100 348 aa24.16■■□□□ 1.46
NEDD4L-237ENST00000617539 ZNF280DQ6N043 979 aa24.16■■□□□ 1.46
NEDD4L-237ENST00000617539 APPL2Q8NEU8 664 aa24.16■■□□□ 1.46
NEDD4L-237ENST00000617539 DNAJC19Q96DA6 116 aa24.16■■□□□ 1.46
NEDD4L-237ENST00000617539 STRA6Q9BX79 667 aa24.16■■□□□ 1.46
NEDD4L-237ENST00000617539 RPF1Q9H9Y2 349 aaKnown RBP24.16■■□□□ 1.46
NEDD4L-237ENST00000617539 TIMM13Q9Y5L4 95 aaPredicted RBP24.16■■□□□ 1.46
NEDD4L-237ENST00000617539 INSL5Q9Y5Q6 135 aa24.16■■□□□ 1.46
NEDD4L-237ENST00000617539 MORC2Q9Y6X9 1032 aaPredicted RBP24.16■■□□□ 1.46
NEDD4L-237ENST00000617539 SCN1AP35498 2009 aa24.15■■□□□ 1.46
NEDD4L-237ENST00000617539 NRG2O14511 850 aaPredicted RBP24.15■■□□□ 1.46
NEDD4L-237ENST00000617539 PRRG1O14668 218 aa24.15■■□□□ 1.46
NEDD4L-237ENST00000617539 NFICP08651 508 aa24.15■■□□□ 1.46
NEDD4L-237ENST00000617539 SPATA1Q5VX52 437 aa24.15■■□□□ 1.46
NEDD4L-237ENST00000617539 TPGS2Q68CL5 300 aa24.15■■□□□ 1.46
NEDD4L-237ENST00000617539 JADE1Q6IE81 842 aa24.15■■□□□ 1.46
NEDD4L-237ENST00000617539 ZNF720Q7Z2F6 126 aa24.15■■□□□ 1.46
NEDD4L-237ENST00000617539 KRI1Q8N9T8 703 aaKnown RBP24.15■■□□□ 1.46
NEDD4L-237ENST00000617539 ATOH1Q92858 354 aaPredicted RBP24.15■■□□□ 1.46
NEDD4L-237ENST00000617539 CYP4F11Q9HBI6 524 aa24.15■■□□□ 1.46
NEDD4L-237ENST00000617539 AVENQ9NQS1 362 aaPredicted RBP24.15■■□□□ 1.46
NEDD4L-237ENST00000617539 CCDC39Q9UFE4 941 aa24.15■■□□□ 1.46
NEDD4L-237ENST00000617539 STYXL1Q9Y6J8 313 aa24.15■■□□□ 1.46
NEDD4L-237ENST00000617539 OAZ2O95190 189 aa24.14■■□□□ 1.45
NEDD4L-237ENST00000617539 VNN2O95498 520 aa24.14■■□□□ 1.45
NEDD4L-237ENST00000617539 ELF1P32519 619 aa24.14■■□□□ 1.45
NEDD4L-237ENST00000617539 ACOT2P49753 483 aa24.14■■□□□ 1.45
NEDD4L-237ENST00000617539 GPC5P78333 572 aa24.14■■□□□ 1.45
NEDD4L-237ENST00000617539 SLC39A14Q15043 492 aa24.14■■□□□ 1.45
NEDD4L-237ENST00000617539 RRAGBQ5VZM2 374 aa24.14■■□□□ 1.45
NEDD4L-237ENST00000617539 RNF19BQ6ZMZ0 732 aa24.14■■□□□ 1.45
NEDD4L-237ENST00000617539 MRPS23Q9Y3D9 190 aaKnown RBP24.14■■□□□ 1.45
NEDD4L-237ENST00000617539 CFAP54Q96N23 3096 aa24.14■■□□□ 1.45
NEDD4L-237ENST00000617539 STX6O43752 255 aa24.13■■□□□ 1.45
NEDD4L-237ENST00000617539 LRG1P02750 347 aa24.13■■□□□ 1.45
NEDD4L-237ENST00000617539 CEBPBP17676 345 aa24.13■■□□□ 1.45
NEDD4L-237ENST00000617539 ABCD1P33897 745 aa24.13■■□□□ 1.45
NEDD4L-237ENST00000617539 YWHAHQ04917 246 aaPredicted RBP24.13■■□□□ 1.45
NEDD4L-237ENST00000617539 ADCY1Q08828 1119 aa24.13■■□□□ 1.45
NEDD4L-237ENST00000617539 KCNA1Q09470 495 aa24.13■■□□□ 1.45
NEDD4L-237ENST00000617539 PRSS36Q5K4E3 855 aa24.13■■□□□ 1.45
NEDD4L-237ENST00000617539 MTSS1LQ765P7 747 aa24.13■■□□□ 1.45
NEDD4L-237ENST00000617539 CCDC105Q8IYK2 499 aa24.13■■□□□ 1.45
NEDD4L-237ENST00000617539 BEST2Q8NFU1 509 aa24.13■■□□□ 1.45
NEDD4L-237ENST00000617539 FAM212AQ96EL1 285 aa24.13■■□□□ 1.45
NEDD4L-237ENST00000617539 TSPAN18Q96SJ8 248 aa24.13■■□□□ 1.45
NEDD4L-237ENST00000617539 KXD1Q9BQD3 176 aa24.13■■□□□ 1.45
NEDD4L-237ENST00000617539 IRF2BPLQ9H1B7 796 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms