RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 TRIM64CA6NLI5 447 aa14.27□□□□□ -0.13
PPP4R3B-205ENST00000616288 CYP27B1O15528 508 aa14.27□□□□□ -0.13
PPP4R3B-205ENST00000616288 TMEM63BQ5T3F8 832 aa14.27□□□□□ -0.13
PPP4R3B-205ENST00000616288 RINT1Q6NUQ1 792 aa14.27□□□□□ -0.13
PPP4R3B-205ENST00000616288 ATG9AQ7Z3C6 839 aa14.27□□□□□ -0.13
PPP4R3B-205ENST00000616288 ZNF572Q7Z3I7 529 aaPredicted RBP14.27□□□□□ -0.13
PPP4R3B-205ENST00000616288 EFCAB3Q8N7B9 438 aa14.27□□□□□ -0.13
PPP4R3B-205ENST00000616288 CATSPER1Q8NEC5 780 aa14.27□□□□□ -0.13
PPP4R3B-205ENST00000616288 SLAIN2Q9P270 581 aa14.27□□□□□ -0.13
PPP4R3B-205ENST00000616288 GPC6Q9Y625 555 aaPredicted RBP14.27□□□□□ -0.13
PPP4R3B-205ENST00000616288 A0A0J9YVX5 310 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 TMEM247A6NEH6 219 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 E9PMD0 336 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 STARD3NLO95772 234 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 VCLP18206 1134 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 AMPD1P23109 780 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 YARSP54577 528 aaKnown RBP14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 FOLH1Q04609 750 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 LSAMPQ13449 338 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 SRBD1Q8N5C6 995 aaKnown RBP14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 CALML6Q8TD86 181 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 IP6K1Q92551 441 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 PPP1R36Q96LQ0 422 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 C7orf25Q9BPX7 421 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 MAK16Q9BXY0 300 aaKnown RBP14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 NOL6Q9H6R4 1146 aaKnown RBP14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 CARD8Q9Y2G2 431 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 NR2E1Q9Y466 385 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 AP3B1O00203 1094 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 SERPINB1P30740 379 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 PICALMQ13492 652 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 PFKFB3Q16875 520 aaPredicted RBP14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 TMEM132AQ24JP5 1023 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 SYCP2LQ5T4T6 812 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 SLC13A5Q86YT5 568 aaPredicted RBP14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 ATL2Q8NHH9 583 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 SENP7Q9BQF6 1050 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 WNT8AQ9H1J5 351 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 PHF8Q9UPP1 1060 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 TELO2Q9Y4R8 837 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 UQCRBP14927 111 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 CDC16Q13042 620 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 OR52E8Q6IFG1 317 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 DHDDSQ86SQ9 333 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 BTBD6Q96KE9 485 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 DDX56Q9NY93 547 aaKnown RBP14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 PACSIN3Q9UKS6 424 aa14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 NIP7Q9Y221 180 aaKnown RBP eCLIP14.26□□□□□ -0.13
PPP4R3B-205ENST00000616288 NCAPD2Q15021 1401 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 GNPATO15228 680 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 GGPS1O95749 300 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 PLA2G4BP0C869 781 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 ENO3P13929 434 aaPredicted RBP14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 BGNP21810 368 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 PSMC2P35998 433 aaKnown RBP14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 PERM1Q5SV97 790 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 RSPH3Q86UC2 560 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 RPL26L1Q9UNX3 145 aaKnown RBP14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 PREX2Q70Z35 1606 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 TTLL13PA6NNM8 815 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 TAF4O00268 1085 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 STMN1P16949 149 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 SOX5P35711 763 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 MAPK11Q15759 364 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 GSTCDQ8NEC7 633 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 SNX25Q9H3E2 840 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 COQ6Q9Y2Z9 468 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 ATP7AQ04656 1500 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 IPO5O00410 1097 aaKnown RBP14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 HOXD12P35452 270 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 PPARGP37231 505 aaPredicted RBP14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 ARSEP51690 589 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 DYNLL1P63167 89 aaKnown RBP14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 MYBPC2Q14324 1141 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 GJC2Q5T442 439 aaPredicted RBP14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 OTOAQ7RTW8 1153 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 BAP1Q92560 729 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 OXNAD1Q96HP4 312 aaPredicted RBP14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 DDX25Q9UHL0 483 aaKnown RBP14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 CLEC11AQ9Y240 323 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 KAT6BQ8WYB5 2073 aa14.25□□□□□ -0.13
PPP4R3B-205ENST00000616288 C2orf71A6NGG8 1288 aa14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 CAPN8A6NHC0 703 aa14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 PIAS1O75925 651 aa14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 GNAZP19086 355 aa14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 COPAP53621 1224 aa14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 AQP5P55064 265 aa14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 SMAD1Q15797 465 aaKnown RBP14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 CCDC153Q494R4 210 aa14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 CENPPQ6IPU0 288 aa14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 ACAD11Q709F0 780 aa14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 RHPN2Q8IUC4 686 aa14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 GABPB2Q8TAK5 448 aaPredicted RBP14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 HPS1Q92902 700 aa14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 OMA1Q96E52 524 aa14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 COX4I2Q96KJ9 171 aa14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 KCNK16Q96T55 309 aa14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 MMTAG2Q9BU76 263 aaKnown RBP14.24□□□□□ -0.13
PPP4R3B-205ENST00000616288 KBTBD4Q9NVX7 518 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms