RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 CLDN3O15551 220 aa22.67■■□□□ 1.22
TRAPPC3-208ENST00000616074 ECI2O75521 394 aa22.67■■□□□ 1.22
TRAPPC3-208ENST00000616074 CD2BP2O95400 341 aaKnown RBP22.67■■□□□ 1.22
TRAPPC3-208ENST00000616074 SP9P0CG40 484 aa22.67■■□□□ 1.22
TRAPPC3-208ENST00000616074 SPAG1Q07617 926 aa22.67■■□□□ 1.22
TRAPPC3-208ENST00000616074 ZNF280DQ6N043 979 aa22.67■■□□□ 1.22
TRAPPC3-208ENST00000616074 DDX12PQ92771 950 aa22.67■■□□□ 1.22
TRAPPC3-208ENST00000616074 CORO1BQ9BR76 489 aa22.67■■□□□ 1.22
TRAPPC3-208ENST00000616074 MTF2Q9Y483 593 aaPredicted RBP22.67■■□□□ 1.22
TRAPPC3-208ENST00000616074 H3BQV1 296 aa22.66■■□□□ 1.22
TRAPPC3-208ENST00000616074 MATR3P43243 847 aaKnown RBP eCLIP22.66■■□□□ 1.22
TRAPPC3-208ENST00000616074 NCKAP1LP55160 1127 aa22.66■■□□□ 1.22
TRAPPC3-208ENST00000616074 UBXN2BQ14CS0 331 aa22.66■■□□□ 1.22
TRAPPC3-208ENST00000616074 ARSHQ5FYA8 562 aa22.66■■□□□ 1.22
TRAPPC3-208ENST00000616074 ARL6IP4Q66PJ3 421 aaKnown RBP22.66■■□□□ 1.22
TRAPPC3-208ENST00000616074 TPGS2Q68CL5 300 aa22.66■■□□□ 1.22
TRAPPC3-208ENST00000616074 KCNG4Q8TDN1 519 aa22.66■■□□□ 1.22
TRAPPC3-208ENST00000616074 TCEAL4Q96EI5 215 aa22.66■■□□□ 1.22
TRAPPC3-208ENST00000616074 SEMA4AQ9H3S1 761 aa22.66■■□□□ 1.22
TRAPPC3-208ENST00000616074 DMXL1Q9Y485 3027 aa22.65■■□□□ 1.22
TRAPPC3-208ENST00000616074 NRG2O14511 850 aaPredicted RBP22.65■■□□□ 1.22
TRAPPC3-208ENST00000616074 LMNAP02545 664 aaKnown RBP22.65■■□□□ 1.22
TRAPPC3-208ENST00000616074 CD72P21854 359 aa22.65■■□□□ 1.22
TRAPPC3-208ENST00000616074 CCR2P41597 374 aa22.65■■□□□ 1.22
TRAPPC3-208ENST00000616074 ADCY1Q08828 1119 aa22.65■■□□□ 1.22
TRAPPC3-208ENST00000616074 TANGO2Q6ICL3 276 aa22.65■■□□□ 1.22
TRAPPC3-208ENST00000616074 MAML2Q8IZL2 1156 aaPredicted RBP22.65■■□□□ 1.22
TRAPPC3-208ENST00000616074 APPL2Q8NEU8 664 aa22.65■■□□□ 1.22
TRAPPC3-208ENST00000616074 BICD1Q96G01 975 aa22.65■■□□□ 1.22
TRAPPC3-208ENST00000616074 LTB4R2Q9NPC1 389 aa22.65■■□□□ 1.22
TRAPPC3-208ENST00000616074 LARSQ9P2J5 1176 aaKnown RBP22.65■■□□□ 1.22
TRAPPC3-208ENST00000616074 PCDHB8Q9UN66 801 aa22.65■■□□□ 1.22
TRAPPC3-208ENST00000616074 TTC26A0AVF1 554 aa22.64■■□□□ 1.21
TRAPPC3-208ENST00000616074 FCARP24071 287 aa22.64■■□□□ 1.21
TRAPPC3-208ENST00000616074 TNFSF9P41273 254 aa22.64■■□□□ 1.21
TRAPPC3-208ENST00000616074 TPRG1Q6ZUI0 275 aa22.64■■□□□ 1.21
TRAPPC3-208ENST00000616074 PDZD4Q76G19 769 aaPredicted RBP22.64■■□□□ 1.21
TRAPPC3-208ENST00000616074 HAUS6Q7Z4H7 955 aa22.64■■□□□ 1.21
TRAPPC3-208ENST00000616074 LRRC15Q8TF66 581 aa22.64■■□□□ 1.21
TRAPPC3-208ENST00000616074 ELSPBP1Q96BH3 223 aa22.64■■□□□ 1.21
TRAPPC3-208ENST00000616074 KIF12Q96FN5 646 aa22.64■■□□□ 1.21
TRAPPC3-208ENST00000616074 REEP2Q9BRK0 252 aa22.64■■□□□ 1.21
TRAPPC3-208ENST00000616074 BCO2Q9BYV7 579 aa22.64■■□□□ 1.21
TRAPPC3-208ENST00000616074 PLEKHA5Q9HAU0 1116 aa22.64■■□□□ 1.21
TRAPPC3-208ENST00000616074 AFF4Q9UHB7 1163 aaKnown RBP22.64■■□□□ 1.21
TRAPPC3-208ENST00000616074 EP300Q09472 2414 aaPredicted RBP22.64■■□□□ 1.21
TRAPPC3-208ENST00000616074 COL4A2P08572 1712 aa22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 FAM170BA6NMN3 283 aa22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 H0YCG3 227 aa22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 M0QZQ0 153 aa22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 CLTAP09496 248 aa22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 CPB1P15086 417 aa22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 LRPAP1P30533 357 aa22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 TWF1Q12792 350 aa22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 ZC3H14Q6PJT7 736 aaKnown RBP22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 RNF19BQ6ZMZ0 732 aa22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 HS6ST3Q8IZP7 471 aa22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 KCNN1Q92952 543 aa22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 OSBPL6Q9BZF3 934 aa22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 SPATA6Q9NWH7 488 aaPredicted RBP22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 CEP72Q9P209 647 aa22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 ODF2LQ9ULJ1 636 aa22.63■■□□□ 1.21
TRAPPC3-208ENST00000616074 ZNF197O14709 1029 aa22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 MICAL2O94851 1124 aa22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 MARCKSP29966 332 aaPredicted RBP22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 LIG4P49917 911 aa22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 PPP2R3AQ06190 1150 aa22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 GRM2Q14416 872 aa22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 ZBTB6Q15916 424 aa22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 FAM78AQ5JUQ0 283 aa22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 ZBTB41Q5SVQ8 909 aa22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 GPBP1Q86WP2 473 aa22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 ELMOD1Q8N336 334 aa22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 AK8Q96MA6 479 aa22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 HEBP1Q9NRV9 189 aa22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 UBQLN1Q9UMX0 589 aaKnown RBP22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 TIMM13Q9Y5L4 95 aaPredicted RBP22.62■■□□□ 1.21
TRAPPC3-208ENST00000616074 LACTBL1A8MY62 500 aa22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 K7ENM7 598 aa22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 FAM189A1O60320 539 aa22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 MOSPD3O75425 235 aa22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 ANK1P16157 1881 aa22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 TARSP26639 723 aaKnown RBP22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 AARSP49588 968 aaKnown RBP eCLIP22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 GUCY2FP51841 1108 aa22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 YWHAHQ04917 246 aaPredicted RBP22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 DHX8Q14562 1220 aaKnown RBP22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 CYP4A22Q5TCH4 519 aa22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 IQCEQ6IPM2 695 aa22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 CALML4Q96GE6 196 aa22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 ZNF512Q96ME7 567 aaPredicted RBP22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 ASB16Q96NS5 453 aa22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 BLOC1S4Q9NUP1 217 aa22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 MAFFQ9ULX9 164 aa22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 TBX20Q9UMR3 447 aa22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 TICRRQ7Z2Z1 1910 aa22.61■■□□□ 1.21
TRAPPC3-208ENST00000616074 DNAH14Q0VDD8 3507 aa22.6■■□□□ 1.21
TRAPPC3-208ENST00000616074 TSC2P49815 1807 aa22.6■■□□□ 1.21
TRAPPC3-208ENST00000616074 SHISA7A6NL88 538 aa22.6■■□□□ 1.21
TRAPPC3-208ENST00000616074 HNRNPDLO14979 420 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms