RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 GYPCP04921 128 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 LINC00271P0C7V0 271 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 CXCL8P10145 99 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 DLATP10515 647 aaKnown RBP12.35□□□□□ -0.43
SLIRP-212ENST00000613856 CD52P31358 61 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 RAB27AP51159 221 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 WNT7BP56706 349 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 KCNMA1Q12791 1236 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 CETN1Q12798 172 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 DSC3Q14574 896 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 PTPN21Q16825 1174 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 EXOC3L4Q17RC7 722 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 ZACNQ401N2 412 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 SEZ6Q53EL9 994 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 KRT39Q6A163 491 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 NT5DC4Q86YG4 428 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 CCDC150Q8NCX0 1101 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 EIF2AQ9BY44 585 aaKnown RBP12.35□□□□□ -0.43
SLIRP-212ENST00000613856 EDEM3Q9BZQ6 932 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 TRIM6Q9C030 488 aaPredicted RBP12.35□□□□□ -0.43
SLIRP-212ENST00000613856 TMEM117Q9H0C3 514 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 ASB7Q9H672 318 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 PLEKHA5Q9HAU0 1116 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 PDE11AQ9HCR9 933 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 GCNT4Q9P109 453 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 PADI3Q9ULW8 664 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 MYO15AQ9UKN7 3530 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 TTC26A0AVF1 554 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 GRM6O15303 877 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 MEFVO15553 781 aaPredicted RBP12.34□□□□□ -0.43
SLIRP-212ENST00000613856 MBTPS2O43462 519 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 PTMAP06454 111 aaKnown RBP12.34□□□□□ -0.43
SLIRP-212ENST00000613856 TPM1P09493 284 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 GCLMP48507 274 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 HYAL1Q12794 435 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 TCF15Q12870 199 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 NFX1Q12986 1120 aaKnown RBP12.34□□□□□ -0.43
SLIRP-212ENST00000613856 ARID5BQ14865 1188 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 TIGD5Q53EQ6 642 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 PLEKHG4Q58EX7 1191 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 TWF2Q6IBS0 349 aaKnown RBP12.34□□□□□ -0.43
SLIRP-212ENST00000613856 DPY19L2P1Q6NXN4 242 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 PPFIBP1Q86W92 1011 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 RNF135Q8IUD6 432 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 TMEM192Q8IY95 271 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 NEK11Q8NG66 645 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 ACAP3Q96P50 834 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 TSPAN18Q96SJ8 248 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 LSM14BQ9BX40 385 aaKnown RBP12.34□□□□□ -0.43
SLIRP-212ENST00000613856 GANQ9H2C0 597 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 TMX1Q9H3N1 280 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 NSUN3Q9H649 340 aaKnown RBP12.34□□□□□ -0.43
SLIRP-212ENST00000613856 TOPORSQ9NS56 1045 aaPredicted RBP12.34□□□□□ -0.43
SLIRP-212ENST00000613856 FBXL5Q9UKA1 691 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 DERAQ9Y315 318 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 C2CD2Q9Y426 696 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 PTPRJQ12913 1337 aa12.34□□□□□ -0.43
SLIRP-212ENST00000613856 DCHS1Q96JQ0 3298 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 MFAP3LO75121 409 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 ZNF623O75123 536 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 AMHP03971 560 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 C4BPAP04003 597 aaKnown RBP12.33□□□□□ -0.44
SLIRP-212ENST00000613856 SKIP12755 728 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 ZSCAN20P17040 1043 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-212ENST00000613856 TNNI1P19237 187 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 TRIM21P19474 475 aaKnown RBP12.33□□□□□ -0.44
SLIRP-212ENST00000613856 RFX1P22670 979 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 PON1P27169 355 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 KLK7P49862 253 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 YARSP54577 528 aaKnown RBP12.33□□□□□ -0.44
SLIRP-212ENST00000613856 OSTNP61366 133 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 PTPROQ16827 1216 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 CTC1Q2NKJ3 1217 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 SLC10A6Q3KNW5 377 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 PUS10Q3MIT2 529 aaKnown RBP12.33□□□□□ -0.44
SLIRP-212ENST00000613856 HS1BP3Q53T59 392 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 XKR4Q5GH76 650 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 TRIM65Q6PJ69 517 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 SV2AQ7L0J3 742 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 CCDC186Q7Z3E2 898 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 CNGA4Q8IV77 575 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 EFCAB13Q8IY85 973 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 HACE1Q8IYU2 909 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 SMG8Q8ND04 991 aaKnown RBP12.33□□□□□ -0.44
SLIRP-212ENST00000613856 FBXL13Q8NEE6 735 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 LMO3Q8TAP4 145 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 ZNF516Q92618 1163 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 PCMTD1Q96MG8 357 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-212ENST00000613856 YME1L1Q96TA2 773 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 POP1Q99575 1024 aaKnown RBP12.33□□□□□ -0.44
SLIRP-212ENST00000613856 CRACR2AQ9BSW2 395 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 FTHL17Q9BXU8 183 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 IFIH1Q9BYX4 1025 aaKnown RBP12.33□□□□□ -0.44
SLIRP-212ENST00000613856 INTS2Q9H0H0 1204 aaKnown RBP12.33□□□□□ -0.44
SLIRP-212ENST00000613856 KCNH6Q9H252 994 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 NXF3Q9H4D5 531 aaKnown RBP12.33□□□□□ -0.44
SLIRP-212ENST00000613856 MMRN2Q9H8L6 949 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 SIX2Q9NPC8 291 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 FAM105AQ9NUU6 356 aa12.33□□□□□ -0.44
SLIRP-212ENST00000613856 CEP72Q9P209 647 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms