RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 FMR1NBQ8N0W7 255 aaPredicted RBP19.6■□□□□ 0.73
SEMA3B-211ENST00000612509 NOC3LQ8WTT2 800 aaKnown RBP19.6■□□□□ 0.73
SEMA3B-211ENST00000612509 SUSD3Q96L08 255 aa19.6■□□□□ 0.73
SEMA3B-211ENST00000612509 HSPBP1Q9NZL4 362 aa19.6■□□□□ 0.73
SEMA3B-211ENST00000612509 CHMP5Q9NZZ3 219 aa19.6■□□□□ 0.73
SEMA3B-211ENST00000612509 MTRRQ9UBK8 725 aa19.6■□□□□ 0.73
SEMA3B-211ENST00000612509 MTCL1Q9Y4B5 1905 aaKnown RBP19.59■□□□□ 0.73
SEMA3B-211ENST00000612509 DENND4AQ7Z401 1863 aa19.59■□□□□ 0.73
SEMA3B-211ENST00000612509 PPEF2O14830 753 aa19.59■□□□□ 0.73
SEMA3B-211ENST00000612509 ZP2Q05996 745 aa19.59■□□□□ 0.73
SEMA3B-211ENST00000612509 FAM160A1Q05DH4 1040 aa19.59■□□□□ 0.73
SEMA3B-211ENST00000612509 PSMD2Q13200 908 aa19.59■□□□□ 0.73
SEMA3B-211ENST00000612509 RARS2Q5T160 578 aaKnown RBP19.59■□□□□ 0.73
SEMA3B-211ENST00000612509 HS2ST1Q7LGA3 356 aa19.59■□□□□ 0.73
SEMA3B-211ENST00000612509 NT5DC4Q86YG4 428 aa19.59■□□□□ 0.73
SEMA3B-211ENST00000612509 C12orf76Q8N812 135 aaPredicted RBP19.59■□□□□ 0.73
SEMA3B-211ENST00000612509 CCDC34Q96HJ3 373 aa19.59■□□□□ 0.73
SEMA3B-211ENST00000612509 CLSTN3Q9BQT9 956 aa19.59■□□□□ 0.73
SEMA3B-211ENST00000612509 PRKAG3Q9UGI9 489 aa19.59■□□□□ 0.73
SEMA3B-211ENST00000612509 CDH22Q9UJ99 828 aa19.59■□□□□ 0.73
SEMA3B-211ENST00000612509 C2orf16Q68DN1 1984 aa19.58■□□□□ 0.73
SEMA3B-211ENST00000612509 SPDYE4A6NLX3 237 aa19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 TGM5O43548 720 aa19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 AARSP49588 968 aaKnown RBP eCLIP19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 SNRPFP62306 86 aaKnown RBP19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 ITIH3Q06033 890 aa19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 KNOP1Q1ED39 458 aaKnown RBP19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 VARS2Q5ST30 1063 aaKnown RBP19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 C9orf57Q5W0N0 161 aa19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 ANKS3Q6ZW76 656 aa19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 PALB2Q86YC2 1186 aa19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 ADHFE1Q8IWW8 467 aa19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 ENGASEQ8NFI3 743 aa19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 CCDC47Q96A33 483 aaKnown RBP19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 ADAM7Q9H2U9 754 aa19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 SCN1AP35498 2009 aa19.58■□□□□ 0.72
SEMA3B-211ENST00000612509 TNFRSF10AO00220 468 aa19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 ADAM12O43184 909 aa19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 RHOBTB3O94955 611 aa19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 C1RP00736 705 aa19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 SNW1Q13573 536 aaKnown RBP19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 CBX2Q14781 532 aaPredicted RBP19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 CES5AQ6NT32 575 aa19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 KANK3Q6NY19 840 aa19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 ELMSAN1Q6PJG2 1045 aa19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 CBWD2Q8IUF1 395 aa19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 CGNQ9P2M7 1197 aaKnown RBP19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 DPP7Q9UHL4 492 aa19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 FBXW11Q9UKB1 542 aa19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 PCDHB8Q9UN66 801 aa19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 BACE2Q9Y5Z0 518 aa19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 NCOR1O75376 2440 aa19.57■□□□□ 0.72
SEMA3B-211ENST00000612509 ANO9A1A5B4 782 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 M0QZQ0 153 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 PIRO00625 290 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 CLIC2O15247 247 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 CYP2J2P51589 502 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 TFAMQ00059 246 aaKnown RBP19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 KCNB1Q14721 858 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 ZNF280DQ6N043 979 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 LILRA6Q6PI73 481 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 TMC5Q6UXY8 1006 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 C12orf56Q8IXR9 622 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 FEZF2Q8TBJ5 459 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 NECTIN4Q96NY8 510 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 POP1Q99575 1024 aaKnown RBP19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 KIAA1586Q9HCI6 787 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 DPP3Q9NY33 737 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 CDY1Q9Y6F8 540 aa19.56■□□□□ 0.72
SEMA3B-211ENST00000612509 ZNF233A6NK53 670 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 TULP1O00294 542 aaPredicted RBP19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 WEE2P0C1S8 567 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 SPATA31D3P0C874 917 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 SSTR3P32745 418 aaPredicted RBP19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 PNOCQ13519 176 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 SNRNP35Q16560 246 aaKnown RBP19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 RSPO2Q6UXX9 243 aaPredicted RBP19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 SPATA31D4Q6ZUB0 917 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 GJD3Q8N144 294 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 KREMEN2Q8NCW0 462 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 APPL2Q8NEU8 664 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 CMASQ8NFW8 434 aaPredicted RBP19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 GOLGA5Q8TBA6 731 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 HDAC7Q8WUI4 952 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 FAM84AQ96KN4 292 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 RIPOR3Q96MK2 946 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 PHF7Q9BWX1 381 aaPredicted RBP19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 PLEKHA4Q9H4M7 779 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 PDE11AQ9HCR9 933 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 CD320Q9NPF0 282 aa19.55■□□□□ 0.72
SEMA3B-211ENST00000612509 C19orf67A6NJJ6 358 aa19.54■□□□□ 0.72
SEMA3B-211ENST00000612509 H7C4K7 107 aa19.54■□□□□ 0.72
SEMA3B-211ENST00000612509 SPTLC1O15269 473 aa19.54■□□□□ 0.72
SEMA3B-211ENST00000612509 OR1D2P34982 312 aa19.54■□□□□ 0.72
SEMA3B-211ENST00000612509 MTHFRP42898 656 aa19.54■□□□□ 0.72
SEMA3B-211ENST00000612509 LILRA4P59901 499 aa19.54■□□□□ 0.72
SEMA3B-211ENST00000612509 RAB33AQ14088 237 aa19.54■□□□□ 0.72
SEMA3B-211ENST00000612509 MRPL58Q14197 206 aaKnown RBP19.54■□□□□ 0.72
SEMA3B-211ENST00000612509 SLC8B1Q6J4K2 584 aa19.54■□□□□ 0.72
SEMA3B-211ENST00000612509 DSTYKQ6XUX3 929 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms