RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 DMTF1Q9Y222 760 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 ANKRD36CQ5JPF3 1778 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 NUP98P52948 1817 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 C2orf71A6NGG8 1288 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 KLRF2D3W0D1 207 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 PLSCR1O15162 318 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 FOXD2O60548 495 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-218ENST00000608440 IDH1O75874 414 aaKnown RBP13.28□□□□□ -0.28
CTCFL-218ENST00000608440 TKTP29401 623 aaKnown RBP13.28□□□□□ -0.28
CTCFL-218ENST00000608440 MTMR2Q13614 643 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 LRRC41Q15345 812 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 MDH1BQ5I0G3 518 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 C1orf146Q5VVC0 180 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 SUSD4Q5VX71 490 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 CCDC105Q8IYK2 499 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 USP6NLQ92738 828 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 COX4I2Q96KJ9 171 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 PWWP2AQ96N64 755 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 PARP2Q9UGN5 583 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 NIP7Q9Y221 180 aaKnown RBP eCLIP13.28□□□□□ -0.28
CTCFL-218ENST00000608440 GIT1Q9Y2X7 761 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 ARHGAP10A1A4S6 786 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 C2CD2LO14523 706 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 TTLL1O95922 423 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 ACTN1P12814 892 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 PLCG1P19174 1290 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 CENPPQ6IPU0 288 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 CCDC137Q6PK04 289 aaKnown RBP13.28□□□□□ -0.28
CTCFL-218ENST00000608440 DTHD1Q6ZMT9 781 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 TTC7BQ86TV6 843 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 AMIGO3Q86WK7 504 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 SFR1Q86XK3 245 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 GLIS3Q8NEA6 775 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 PIP4K2CQ8TBX8 421 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 SYN2Q92777 582 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-218ENST00000608440 NEURL2Q9BR09 285 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 RNF26Q9BY78 433 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-218ENST00000608440 EDEM3Q9BZQ6 932 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 CEP44Q9C0F1 390 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 SENP6Q9GZR1 1112 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-218ENST00000608440 CEP126Q9P2H0 1117 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 APPL1Q9UKG1 709 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 SYNPO2Q9UMS6 1093 aa13.28□□□□□ -0.28
CTCFL-218ENST00000608440 H3BRJ5 948 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 CIB2O75838 187 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 OCM2P0CE71 109 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 OCMP0CE72 109 aaPredicted RBP13.27□□□□□ -0.28
CTCFL-218ENST00000608440 FGFR1P11362 822 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 PEX2P28328 305 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 PLCB3Q01970 1234 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 HNRNPDQ14103 355 aaKnown RBP13.27□□□□□ -0.28
CTCFL-218ENST00000608440 NONOQ15233 471 aaKnown RBP eCLIP13.27□□□□□ -0.28
CTCFL-218ENST00000608440 NPY5RQ15761 445 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 DEPDC1Q5TB30 811 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 CCDC62Q6P9F0 684 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 IYDQ6PHW0 289 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 TRMT10CQ7L0Y3 403 aaKnown RBP13.27□□□□□ -0.28
CTCFL-218ENST00000608440 NLRX1Q86UT6 975 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 SYCE1Q8N0S2 351 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 C4orf33Q8N1A6 199 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 JDP2Q8WYK2 163 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 STARD8Q92502 1023 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 TNFRSF25Q93038 417 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 VPS50Q96JG6 964 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 GCNAQ96QF7 691 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 THTPAQ9BU02 230 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 KANSL3Q9P2N6 904 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 SBF2Q86WG5 1849 aa13.27□□□□□ -0.28
CTCFL-218ENST00000608440 UNCXA6NJT0 531 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 BTNL10A8MVZ5 291 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 B2RBV5 119 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 THAP12O43422 761 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 CYP2C9P11712 490 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 ABCB4P21439 1286 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 PIK3CAP42336 1068 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 CTSWP56202 376 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 CALCOCO2Q13137 446 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 SPARCL1Q14515 664 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 TMEM63BQ5T3F8 832 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 C6orf163Q5TEZ5 329 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 FYB2Q5VWT5 728 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 ZNF772Q68DY9 489 aaPredicted RBP13.27□□□□□ -0.29
CTCFL-218ENST00000608440 RGS9BPQ6ZS82 235 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 MFSD6Q6ZSS7 791 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 SLFN11Q7Z7L1 901 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 ANKRD35Q8N283 1001 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 MRRFQ96E11 262 aaKnown RBP13.27□□□□□ -0.29
CTCFL-218ENST00000608440 NSMCE3Q96MG7 304 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 ZBTB21Q9ULJ3 1066 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 NEU2Q9Y3R4 380 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 ZNF831Q5JPB2 1677 aa13.27□□□□□ -0.29
CTCFL-218ENST00000608440 MAGEB2O15479 319 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 DDX3YO15523 660 aaKnown RBP13.26□□□□□ -0.29
CTCFL-218ENST00000608440 FUCA1P04066 466 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 H2AFZP0C0S5 128 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 HSPA8P11142 646 aaKnown RBP13.26□□□□□ -0.29
CTCFL-218ENST00000608440 ENDOUP21128 410 aaKnown RBP13.26□□□□□ -0.29
CTCFL-218ENST00000608440 IL15P40933 162 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-218ENST00000608440 ATP1A4Q13733 1029 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 ANKRD20A4Q4UJ75 823 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms