RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 RBM19Q9Y4C8 960 aaKnown RBP17.31■□□□□ 0.36
HDDC2-203ENST00000608284 MYH15Q9Y2K3 1946 aa17.31■□□□□ 0.36
HDDC2-203ENST00000608284 ARID2Q68CP9 1835 aa17.31■□□□□ 0.36
HDDC2-203ENST00000608284 CACNA1BQ00975 2339 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 MCF2P10911 925 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 CPB1P15086 417 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 MCM4P33991 863 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 PEX3P56589 373 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 FZD5Q13467 585 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 LPAL2Q16609 132 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 ME3Q16798 604 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 MFSD6LQ8IWD5 586 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 NSUN7Q8NE18 718 aaKnown RBP17.3■□□□□ 0.36
HDDC2-203ENST00000608284 OXCT2Q9BYC2 517 aaPredicted RBP17.3■□□□□ 0.36
HDDC2-203ENST00000608284 TMEM134Q9H6X4 195 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 C8orf33Q9H7E9 229 aaPredicted RBP17.3■□□□□ 0.36
HDDC2-203ENST00000608284 POLD4Q9HCU8 107 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 LRWD1Q9UFC0 647 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 KIAA1024Q9UPX6 916 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 DNM3Q9UQ16 869 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 EPG5Q9HCE0 2579 aa17.3■□□□□ 0.36
HDDC2-203ENST00000608284 EIF5BO60841 1220 aaKnown RBP17.29■□□□□ 0.36
HDDC2-203ENST00000608284 SEC24AO95486 1093 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 KCNE1P15382 129 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 FCARP24071 287 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 IGFBP6P24592 240 aaPredicted RBP17.29■□□□□ 0.36
HDDC2-203ENST00000608284 MLLT6P55198 1093 aaPredicted RBP17.29■□□□□ 0.36
HDDC2-203ENST00000608284 TWF1Q12792 350 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 STRN3Q13033 797 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 XKR4Q5GH76 650 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 CD300LGQ6UXG3 332 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 ALKAL1Q6UXT8 129 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 HAUS6Q7Z4H7 955 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.29■□□□□ 0.36
HDDC2-203ENST00000608284 MAP4K3Q8IVH8 894 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 C3orf58Q8NDZ4 430 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 ZSCAN18Q8TBC5 510 aaPredicted RBP17.29■□□□□ 0.36
HDDC2-203ENST00000608284 DDX1Q92499 740 aaKnown RBP17.29■□□□□ 0.36
HDDC2-203ENST00000608284 SUSD3Q96L08 255 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 DRC1Q96MC2 740 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 CDT1Q9H211 546 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 KMT5AQ9NQR1 393 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 NOL7Q9UMY1 257 aaKnown RBP17.29■□□□□ 0.36
HDDC2-203ENST00000608284 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.29■□□□□ 0.36
HDDC2-203ENST00000608284 FANCMQ8IYD8 2048 aa17.29■□□□□ 0.36
HDDC2-203ENST00000608284 DOCK6Q96HP0 2047 aa17.28■□□□□ 0.36
HDDC2-203ENST00000608284 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.28■□□□□ 0.36
HDDC2-203ENST00000608284 WNT7AO00755 349 aa17.28■□□□□ 0.36
HDDC2-203ENST00000608284 DPYSL4O14531 572 aa17.28■□□□□ 0.36
HDDC2-203ENST00000608284 EDN1P05305 212 aa17.28■□□□□ 0.36
HDDC2-203ENST00000608284 HARSP12081 509 aaKnown RBP17.28■□□□□ 0.36
HDDC2-203ENST00000608284 CCNE1P24864 410 aa17.28■□□□□ 0.36
HDDC2-203ENST00000608284 VIPR2P41587 438 aa17.28■□□□□ 0.36
HDDC2-203ENST00000608284 ALDH1A3P47895 512 aa17.28■□□□□ 0.36
HDDC2-203ENST00000608284 EPHB3P54753 998 aa17.28■□□□□ 0.36
HDDC2-203ENST00000608284 MRPL58Q14197 206 aaKnown RBP17.28■□□□□ 0.36
HDDC2-203ENST00000608284 VITQ6UXI7 678 aa17.28■□□□□ 0.36
HDDC2-203ENST00000608284 CEP68Q76N32 757 aa17.28■□□□□ 0.36
HDDC2-203ENST00000608284 USP37Q86T82 979 aa17.28■□□□□ 0.36
HDDC2-203ENST00000608284 SPEM1Q8N4L4 309 aa17.28■□□□□ 0.36
HDDC2-203ENST00000608284 TRPV4Q9HBA0 871 aa17.28■□□□□ 0.36
HDDC2-203ENST00000608284 SPTBN2O15020 2390 aa17.28■□□□□ 0.36
HDDC2-203ENST00000608284 ACACBO00763 2458 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 HEPACAM2A8MVW5 462 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 SLC30A4O14863 429 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 JAK2O60674 1132 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 TGM1P22735 817 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 CCR2P41597 374 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 MATR3P43243 847 aaKnown RBP eCLIP17.27■□□□□ 0.36
HDDC2-203ENST00000608284 NPTX2P47972 431 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 SMTNP53814 917 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 GUCY1B3Q02153 619 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 SOX4Q06945 474 aaPredicted RBP17.27■□□□□ 0.36
HDDC2-203ENST00000608284 DGKKQ5KSL6 1271 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 TTC38Q5R3I4 469 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 MPZL3Q6UWV2 235 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 HS6ST3Q8IZP7 471 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 DDX12PQ92771 950 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 C8orf76Q96K31 380 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 ZSWIM3Q96MP5 696 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 TBC1D32Q96NH3 1257 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 TARS2Q9BW92 718 aaKnown RBP17.27■□□□□ 0.36
HDDC2-203ENST00000608284 C17orf75Q9HAS0 396 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 PARD6AQ9NPB6 346 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 DDX19AQ9NUU7 478 aaKnown RBP17.27■□□□□ 0.36
HDDC2-203ENST00000608284 CNTN3Q9P232 1028 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 PCDHB8Q9UN66 801 aa17.27■□□□□ 0.36
HDDC2-203ENST00000608284 CHADO15335 359 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 KRT37O76014 449 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 FGF19O95750 216 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 CHRNB1P11230 501 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 KCNA4P22459 653 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 FXR2P51116 673 aaKnown RBP eCLIP17.26■□□□□ 0.35
HDDC2-203ENST00000608284 YWHAHQ04917 246 aaPredicted RBP17.26■□□□□ 0.35
HDDC2-203ENST00000608284 PDIA5Q14554 519 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 TEAD2Q15562 447 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 CSRP2Q16527 193 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 ST3GAL2Q16842 350 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 PPM1JQ5JR12 505 aa17.26■□□□□ 0.35
HDDC2-203ENST00000608284 KRT79Q5XKE5 535 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms