RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 PMS1P54277 932 aaKnown RBP15.4■□□□□ 0.06
CTSA-219ENST00000607841 RBP5P82980 135 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 DSG1Q02413 1049 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 CREMQ03060 361 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 KLHL40Q2TBA0 621 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 TCEAL5Q5H9L2 206 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 CT47A1Q5JQC4 288 aaPredicted RBP15.4■□□□□ 0.06
CTSA-219ENST00000607841 CD300LGQ6UXG3 332 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 TAS1R1Q7RTX1 841 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 CEP57Q86XR8 500 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 CSGALNACT2Q8N6G5 542 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 C3orf58Q8NDZ4 430 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 MAFAQ8NHW3 353 aaPredicted RBP15.4■□□□□ 0.06
CTSA-219ENST00000607841 TMC2Q8TDI7 906 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 ZNF560Q96MR9 790 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 CEP63Q96MT8 703 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 CDCA3Q99618 268 aaPredicted RBP15.4■□□□□ 0.06
CTSA-219ENST00000607841 TTPALQ9BTX7 342 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 EMILIN2Q9BXX0 1053 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 MTMR12Q9C0I1 747 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 TLE6Q9H808 572 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.4■□□□□ 0.06
CTSA-219ENST00000607841 RWDD2AQ9UIY3 292 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 CDH23Q9H251 3354 aa15.4■□□□□ 0.06
CTSA-219ENST00000607841 CHD7Q9P2D1 2997 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 C2orf71A6NGG8 1288 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 IKBKBO14920 756 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 SYN3O14994 580 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 KRT19P08727 400 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 BRCC3P46736 316 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 TAF6P49848 677 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 VAMP7P51809 220 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 LILRA4P59901 499 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 CLDN10P78369 228 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 PTPN14Q15678 1187 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 CCDC85BQ15834 202 aaPredicted RBP15.39■□□□□ 0.05
CTSA-219ENST00000607841 SKOR2Q2VWA4 1001 aaPredicted RBP15.39■□□□□ 0.05
CTSA-219ENST00000607841 SV2CQ496J9 727 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 KIAA0319Q5VV43 1072 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 LMBRD2Q68DH5 695 aaPredicted RBP15.39■□□□□ 0.05
CTSA-219ENST00000607841 TTI2Q6NXR4 508 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 DSTYKQ6XUX3 929 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 FILIP1Q7Z7B0 1213 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 ZC3H3Q8IXZ2 948 aaKnown RBP15.39■□□□□ 0.05
CTSA-219ENST00000607841 LRRC52Q8N7C0 313 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 C1orf127Q8N9H9 656 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 APPL2Q8NEU8 664 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 OR5B17Q8NGF7 314 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 PPM1EQ8WY54 764 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 SUSD3Q96L08 255 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 POP1Q99575 1024 aaKnown RBP15.39■□□□□ 0.05
CTSA-219ENST00000607841 METTL14Q9HCE5 456 aaKnown RBP15.39■□□□□ 0.05
CTSA-219ENST00000607841 AGAP1Q9UPQ3 857 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 NLRC5Q86WI3 1866 aa15.39■□□□□ 0.05
CTSA-219ENST00000607841 LRRIQ3A6PVS8 624 aaPredicted RBP15.38■□□□□ 0.05
CTSA-219ENST00000607841 HIDE1A8MVS5 230 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 C2CD2LO14523 706 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 STX10O60499 249 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 PHACTR2O75167 634 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 LETM1O95202 739 aaPredicted RBP15.38■□□□□ 0.05
CTSA-219ENST00000607841 GNA14O95837 355 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 FGFR3P22607 806 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 ERCC5P28715 1186 aaPredicted RBP15.38■□□□□ 0.05
CTSA-219ENST00000607841 POLR2BP30876 1174 aaKnown RBP15.38■□□□□ 0.05
CTSA-219ENST00000607841 AARSP49588 968 aaKnown RBP eCLIP15.38■□□□□ 0.05
CTSA-219ENST00000607841 STX17P56962 302 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 BFSP1Q12934 665 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 MYO1EQ12965 1108 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 SKIV2LQ15477 1246 aaKnown RBP15.38■□□□□ 0.05
CTSA-219ENST00000607841 CAVIN1Q6NZI2 390 aaKnown RBP15.38■□□□□ 0.05
CTSA-219ENST00000607841 TRAPPC11Q7Z392 1133 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 PPFIBP1Q86W92 1011 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 RIN2Q8WYP3 895 aaPredicted RBP15.38■□□□□ 0.05
CTSA-219ENST00000607841 EEF2KMTQ96G04 330 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 PCDHB8Q9UN66 801 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 PTPRJQ12913 1337 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 KIAA1671Q9BY89 1806 aa15.38■□□□□ 0.05
CTSA-219ENST00000607841 TDRD15B5MCY1 1934 aaKnown RBP15.37■□□□□ 0.05
CTSA-219ENST00000607841 KPNA7A9QM74 516 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 I3L4J1 428 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 M0QZQ0 153 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 LILRB3O75022 631 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 SRGAP2BP0DMP2 458 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 ODC1P11926 461 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 IGFBP6P24592 240 aaPredicted RBP15.37■□□□□ 0.05
CTSA-219ENST00000607841 NRIP1P48552 1158 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 BIRC3Q13489 604 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 TRPC3Q13507 836 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 DUSP6Q16828 381 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 DPCR1Q3MIW9 517 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 RTP2Q5QGT7 225 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 ANKS3Q6ZW76 656 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 FRMD5Q7Z6J6 570 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 RBM23Q86U06 439 aaKnown RBP15.37■□□□□ 0.05
CTSA-219ENST00000607841 PLEKHO2Q8TD55 490 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 AUTS2Q8WXX7 1259 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 PIK3R5Q8WYR1 880 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 B3GALT6Q96L58 329 aa15.37■□□□□ 0.05
CTSA-219ENST00000607841 DUSP9Q99956 384 aaKnown RBP15.37■□□□□ 0.05
CTSA-219ENST00000607841 IGFLR1Q9H665 355 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms